Triplophysa dalaica: 130418358
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Entry
130418358 CDS
T09616
Symbol
fyco1b
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130418358 (fyco1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130418358 (fyco1b)
Membrane trafficking [BR:
tdw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
130418358 (fyco1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
RUN
YwqH-like
OB_HELZ2
GOLD_2
Pullulanase_Ins
Motif
Other DBs
NCBI-GeneID:
130418358
NCBI-ProteinID:
XP_056600435
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All DBs
Position
3:23959702..23993296
Genome browser
AA seq
1309 aa
AA seq
DB search
MSTVGENQLQRIIRDLHDAVSELSKEHCETAEPITDDSPNLHKFCYKLEYLLQFDQKEKR
TFLGSRKDYWDYFCYCLAKIKGANDGIRFVKSISELKTSLGKGRSFIRYCLVHQRLADTL
QQCVMNYKITCDWYYERSPFLKSHLNTDIINHLYELNEVQFDVTSRGHDLDSDWPTFARK
TLGSAVSSHAWKPPSRCSSVTSLVSSYSQQNQEFIAGQDFGSSLLGDLGEVGELSCTASE
NLCLELDQSQLKQQELLEKIRVLTNEAADLRAVVKDLEEQLSAAKSPEKRVQSAVAEQKV
FMTVRECTDRLQTTTQELEALRLQEASERNLESKLNVAENRNMELLAKLDGAMSVKGQQA
ASYCDSAWTIQELLTKLKEAEQKKTVCKRVAERLAQELKQQEVKLNEVDSKLDAFNTTTN
KERATADELQMTVNHLQGVLSLKERETNTLCTQLQDLQSVLKIRESHLEEMKGRMQEELQ
QKGMLKEQLKAKESELTVCIDKIRKMESDNERLAADGQSLQPQVRKLEEYKNQCTSLMEI
NTKLIQTVKRNEESSEELAQTKNGLERVLMTAQASETQLRNRLESAGFTVENQHIEECVL
NGQVKNVETREPSSSSDSGESTSRLALAEAQLDLNLKEVCRLQEEVLELRARLLVSSEER
VKIQTLQEVTEASREDIRAQTGQFKSQVEELNCRHVDELMRCREREETLVKDKEGKGQAR
LQTETNAMREELHEGKKHNNSLLLENGEAREALHRAKTETVELGVHVCMLTGQNKEAELR
WEEMSANLQERQTEAQTLSESLEDTKKDNARLQEQLKEMKGLPKVHQELQERLEKAEEES
RSHQVYRQREVETLRSQLSNEAAHHEKQVQRLNEELDELRKKLDVELEKVSSLESKASEL
ESVNSEYSQMIEKKNNRIGDSETVIDQKEEQIKTLRKNLSKAEEQSALAQKACHELGVNL
SRSSMEKQTLELKMSSEIDDLSRTKRNLEERLIELIREKDALWQKSDALEFEQKRRAVDQ
TGRDLAYCLSCRNHFSWILRRHNCRLCGRPFCYNCCKYAVSGQQGGTKERCCKDCYTQQS
HPQTDPGSPLHPPYSTVSSPTRTSTPGVKGELKTPQPDDTVFDIISEDEVSGIHDNSLYT
TALSETGHLDITSTEESDELIGSVQDAEICLLKSGEMTLSASYSLEDVVQFGEGFRELFI
KSSCYSVVLITAAHPGPTISWIFSSDPKSIAFSVVYRENTGTALEQDKVLISLTRCNSHK
ETIQGQVKVRNPGEFTLIFDNSFSRFVSKKVLYKLSIETPEVCNGSDSP
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagtcggtgagaatcagctgcagagaataatcagagatcttcatgatgcagtt
tctgagttgagcaaagagcactgtgagacagcagaacccatcactgatgacagccccaac
cttcacaagttctgttataaactggagtacctgctgcaatttgaccagaaagagaagaga
acatttctgggaagcagaaaagactactgggattatttctgctactgtttggccaagata
aaaggagctaatgatggcattcgcttcgtcaaatcgatctccgagctgaagacatcactt
gggaaaggacggtccttcatacgatactgtctcgtgcaccagagacttgcagatactctc
cagcaatgtgttatgaactacaaaatcacatgtgactggtattatgaacgcagcccattc
ctaaagtcccatcttaacactgatataatcaaccatctgtatgaactcaatgaggtccag
tttgacgtaacatctaggggtcacgaccttgactccgactggcccacctttgccagaaag
actctgggatcagcagtctcatcccatgcatggaaaccacccagtcgctgctccagtgtc
accagtctggtcagcagttactcacagcaaaatcaggaattcattgcaggccaggatttc
ggttccagtcttctaggtgatctgggagaggtaggcgagctctcctgtactgcttctgag
aacctttgcttagagcttgaccagtctcagctgaaacaacaagagctcctggagaagatc
cgggtgctgaccaatgaagcagctgatctgagggctgtggtcaaggatctggaggaacag
ctttcggctgctaaaagtccagagaaaagagtgcagtctgcagtggctgagcagaaggtc
ttcatgactgtcagagagtgcaccgatcgtctccaaaccaccacgcaggaactggaggct
cttcgacttcaagaagcatcagaacgcaacctagaatccaaactgaatgtcgccgagaac
agaaacatggagctgctggccaaactcgacggagctatgagcgtaaaaggacagcaggcc
gccagctactgcgactcggcctggacgatccaagagctcctaaccaaactaaaagaggcg
gagcaaaagaaaaccgtatgtaaacgagtggccgagcgacttgctcaggagctgaagcaa
caggaggtaaaactaaatgaggtggacagcaaactggacgcatttaacacgactaccaac
aaggaacgagcaactgcagatgagctgcagatgaccgtaaaccacctccagggagtgctc
tctctgaaggagcgggagacgaataccctttgtacgcaattgcaggacttgcaaagcgta
ctgaagattcgagagtcccatctggaggagatgaagggacgaatgcaagaggagctgcaa
cagaagggcatgctcaaggagcaactcaaggcaaaggagtctgagcttaccgtctgcatt
gacaagattcgcaaaatggagagtgacaatgagagattggctgcggacggtcagagcttg
caaccgcaagtcaggaaactggaggagtacaaaaaccagtgcacaagcttaatggagatc
aacaccaagctgatccagactgtgaaaagaaatgaagaaagcagcgaggagctagcacaa
accaagaatggtctggagagagtgctgatgactgcacaggcatcggagacacagctgaga
aacagactggagtctgctggatttacggtggagaaccagcacatcgaggagtgtgttttg
aatggccaggtgaagaacgttgagactagagagccctcctcaagctctgatagtggagaa
tccacctcaaggttggctctggctgaggctcaacttgacctcaacttgaaggaggtttgc
agacttcaggaggaggttttggaacttcgggctcggctcctggtgagctcggaggagagg
gtgaagatccagacactgcaagaggttacggaagcctctcgagaggacatccgggctcag
acggggcaattcaagagccaggtggaagaactaaactgcagacacgtggatgaactgatg
cgttgcagagaaagagaagagaccctggtaaaggataaggaaggcaaaggccaagcgaga
ctccagacggagacgaatgccatgagggaagagcttcatgaggggaagaaacacaacaac
agtctgttgctggagaatggagaggctcgtgaggccttgcacagggccaagacggaaacg
gtagagctcggggttcacgtttgcatgctgacaggacagaacaaggaggctgagctgcga
tgggaggagatgtctgccaacttgcaggagagacagacggaggcacaaactttgagtgaa
tctctggaagacacgaagaaggataatgcaagactccaggagcagctaaaggagatgaag
ggacttcctaaagtccatcaggagttgcaggaacgtcttgaaaaggcagaagaagaatcg
aggagtcatcaggtgtacagacagagagaggtggagacccttaggtcccagctaagcaac
gaggctgcacaccacgaaaaacaagtgcagcgtctaaatgaagaactggatgaactgaga
aagaaactggatgtcgaacttgagaaagtttcgagtcttgagtccaaagcatcagagcta
gagtctgtcaacagcgagtacagtcagatgatcgaaaagaaaaacaaccgcattggtgat
tctgaaaccgttattgatcagaaagaggaacagataaaaacactccgaaagaacttatcg
aaagctgaggagcagtcggctcttgcacagaaggcctgtcatgagctgggtgtgaatttg
agcagaagttcgatggagaagcaaaccctggagctgaagatgtcctctgagatagatgac
ctttctcgcaccaagaggaacctggaagagagacttattgaacttataagggagaaagat
gctttgtggcagaagtcagatgcgctagagtttgagcagaaacggagggccgtagatcag
acaggccgagaccttgcatactgtctcagctgccgcaaccacttcagctggatactgcgc
agacacaactgcaggttatgtgggcgtcccttttgttacaactgctgcaagtatgctgtg
agtggccagcagggcggcactaaagagcgatgctgtaaggactgctacactcagcaaagc
cacccacagacagatccaggtagtcctttacatccaccctacagcacagtctcaagtcct
accagaaccagcacacctggagtcaaaggggagctgaagaccccccagccggacgatacg
gtgtttgacatcatatctgaagatgaagtgagcggtatccatgataattcgctgtacacc
actgcactctctgagactggacatcttgacatcacaagcacagaggaatcggacgagctg
attggctctgttcaggatgcagaaatctgcctgctgaaatctggagagatgacgttgtca
gcgtcgtacagtctggaggacgtggttcagtttggcgaagggttcagagaactcttcatc
aagtccagctgttacagtgttgttctcataactgctgctcatcccggtcctaccatcagc
tggatcttctcttctgatcccaagagcattgccttcagcgtggtgtacagagagaacacg
ggcacggctctggaacaggataaggttctcatctctctgacaagatgcaactctcataag
gaaaccattcagggacaggtgaaggtcaggaaccctggagaattcactctcatcttcgac
aactccttctccaggttcgtttcgaagaaagtcctgtacaaactgagtatagagacacca
gaggtctgcaatggaagtgattctccttaa
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