Triplophysa dalaica: 130419012 Help Entry 130419012         CDS       T09616                                  Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism tdw  Triplophysa dalaica Pathway tdw04010   MAPK signaling pathway tdw04137   Mitophagy - animal tdw04141   Protein processing in endoplasmic reticulum tdw04210   Apoptosis tdw04217   Necroptosis tdw04621   NOD-like receptor signaling pathway tdw04622   RIG-I-like receptor signaling pathway tdw04920   Adipocytokine signaling pathway tdw05132   Salmonella infection tdw05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:tdw00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     130419012  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     130419012  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     130419012   09143 Cell growth and death    04210 Apoptosis     130419012    04217 Necroptosis     130419012  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     130419012    04622 RIG-I-like receptor signaling pathway     130419012   09152 Endocrine system    04920 Adipocytokine signaling pathway     130419012  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     130419012   09171 Infectious disease: bacterial    05132 Salmonella infection     130419012  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tdw03019]     130419012    04121 Ubiquitin system [BR:tdw04121]     130419012 Enzymes [BR:tdw01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      130419012 Messenger RNA biogenesis [BR:tdw03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      130419012 Ubiquitin system [BR:tdw04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     130419012 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_2 ATG16 zf-RING_6 zf-C3HC4_4 Sina_ZnF Motif Other DBs NCBI-GeneID:  130419012 NCBI-ProteinID:  XP_056601325 LinkDB All DBs Position 4:16150143..16158573 Genome browser AA seq 588 aa AA seqDB search MAAQEPSPPSSMENNKPGFPKKILANKLEDKHLCNCCQNILRRPFQAQCGHRFCSYCFNR TVGSGPQKCSACIKEDIFEEPTSILKQGCAFPDNAARREVENLPAVCISEGCCWKGSIKD YELNHEGKCEFMILACSLCKELIRLNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE ICPKYPMICEGCAKKKIPREKYFDHIKFCSKFRTPCRYHVVGCDMLVEKEKIHEHERACA HDHLNLLLHCIMGMKVSLEGLQPQNLELAGHKALELHKALRDLEARVSQLCAIPGPSGPP VQGVPSSSSSTPSSSASASGQPPPPLPTSFTPLPSTVGAALELQLHSEKTKVAELARRCQ EIEVKAGTFEDVVCVLNREVERFATTIEASNRQHRLDQDKIEALSNKVRQLERQVGVKDL TVAEMEGRLREMSATTFDGVFIWRISDFTKKRQDAVAGRAPAMFSPAFYTSKYGYRMCLR IYLNGDGTGRGSHLSLFFVVMRGMSDALLKWPFNQKVTLMLLDQSNREHIIDAFRPDITS SSFQRPVSEMNIASGCPLFCPLSKLEGKNSYIRDDTIFIKAIVDLTGL NT seq 1767 nt NT seq  +upstreamnt  +downstreamnt atggctgctcaagaaccgtctccaccctcctccatggagaacaacaagccagggtttccc aaaaagatcctggccaataaacttgaagacaaacatttatgcaactgttgtcaaaacatt ttgaggagaccgttccaagctcagtgcggccatcgcttttgctcttactgcttcaaccgg actgtgggatctggaccacagaagtgtagtgcttgtatcaaagaggacatctttgaagag cctacatcaattctcaaacaaggctgtgcgtttccagacaacgcggctagaagagaggtg gaaaatctcccagccgtctgcatcagtgagggatgctgttggaagggaagcatcaaagat tatgagctgaaccatgaagggaaatgtgagttcatgattctggcctgttccctgtgtaaa gagctcatcagactgaacgaacaggaacgtcacaatgaacgtgaatgccccgagagaacc ctcaactgtaaatactgtaaagagccatttcacttcaaaaacatcaaggcacatgatgaa atctgtcccaaataccccatgatctgtgaaggatgcgccaagaagaaaatcccaagagaa aaatattttgatcacatcaagttctgcagtaaattcaggacaccatgcagatatcatgtg gtcggctgtgatatgttggtggaaaaggagaagatccacgagcacgagcgagcctgcgcc cacgaccatctcaacctgctgctgcactgcatcatgggaatgaaggtcagtctggagggt ctgcagcctcagaatctggagctggcgggtcacaaagcgctcgagctccataaggctctg agagacctggaggccagagtcagtcagttgtgcgccatcccgggcccgtccggacctccc gtgcagggggtcccctcatcttcgtcctccacaccgtcgtcctctgcgtctgcctccggg cagccccctcctcctctgcccacctccttcactcctctgcccagcacagtaggcgccgcc ctggagcttcagctgcacagcgagaagaccaaagtggcagaactggcccggcgctgtcag gagattgaggtgaaggcggggacgtttgaagatgtggtgtgcgtactgaaccgtgaggtg gagcgcttcgccacaaccatagaagcaagcaaccggcagcacagactggatcaagacaaa atagaggctcttagtaacaaggtgcgtcagctggagagacaggtgggtgttaaggatctc acggtggccgagatggagggcagattacgcgagatgtctgctaccacttttgatggcgtc ttcatctggcgaatatcagacttcactaaaaagagacaagatgctgtcgctggacgagct cctgccatgttttcaccagcattctataccagtaaatacggctataggatgtgtttgcgc atctatttgaatggagacggaacgggccgcgggtctcatctatctctgttcttcgtggtc atgcgggggatgagtgacgctcttctcaaatggccattcaaccagaaggtcaccctgatg ctgctggaccaaagtaacagagagcacatcatcgacgctttccggcccgacatcacctcc tcttcattccagaggccggtcagcgagatgaacattgccagcggatgtcctctcttctgt ccgctgtccaagctggagggcaagaactcttacatccgcgacgacaccatcttcatcaaa gccattgtggacctcaccggcctttag

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