KEGG   Triplophysa dalaica: 130419591
Entry
130419591         CDS       T09616                                 
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
tdw  Triplophysa dalaica
Pathway
tdw04010  MAPK signaling pathway
tdw04137  Mitophagy - animal
tdw04141  Protein processing in endoplasmic reticulum
tdw04210  Apoptosis
tdw04217  Necroptosis
tdw04621  NOD-like receptor signaling pathway
tdw04622  RIG-I-like receptor signaling pathway
tdw04920  Adipocytokine signaling pathway
tdw05132  Salmonella infection
tdw05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    130419591 (traf2b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    130419591 (traf2b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    130419591 (traf2b)
  09143 Cell growth and death
   04210 Apoptosis
    130419591 (traf2b)
   04217 Necroptosis
    130419591 (traf2b)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    130419591 (traf2b)
   04622 RIG-I-like receptor signaling pathway
    130419591 (traf2b)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    130419591 (traf2b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    130419591 (traf2b)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    130419591 (traf2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdw03019]
    130419591 (traf2b)
   04121 Ubiquitin system [BR:tdw04121]
    130419591 (traf2b)
Enzymes [BR:tdw01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     130419591 (traf2b)
Messenger RNA biogenesis [BR:tdw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     130419591 (traf2b)
Ubiquitin system [BR:tdw04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    130419591 (traf2b)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_2 zf-RING_5 zf-RING_4 zf-C3HC4_4 Paramyxo_NS_C zf-U11-48K zf-RING_6
Other DBs
NCBI-GeneID: 130419591
NCBI-ProteinID: XP_056602415
EnsemblRapid: ENSTDLG00000013366
LinkDB
Position
4:complement(7034139..7060484)
AA seq 536 aa
MLSTGDTVSKWKAMAHPSLPSSLDSTLPGISRDVLSVSMESKYQCQQCKEILRKPYQAQC
GHRFCVFCFKQLTSTGPTPCEACRAEGIFEESTSMLDITVAFPDNAARREIDSLPAKCPN
EGCSWNGLLKDYEGQHEGRCEFERVKCEACQALIMLSEKDRHNERECEARTLNCKYCKVT
FNFKEIKAHDEICQKFPMQCKDCGKKKIPREKFQEHVKSCPKSKSACQFSEIGCRAVLDN
GKQQEHEQMSVMEHLRLMLGVLSSVRLRPETGGEWQEDSGLGLYRGPEDAPLVGAHAAPH
NVGRGGSPSVQHKVTALENIVCVLNREVERSALTLEALSRQHRIDQDKIENLSTKVRQLE
RTLTMRDLQLAESEQSLREMQFCTYDGVFIWKISDFSRRRQDAVGGRAPAMFSPAFYSSK
YGYKMCLRLYLNGDGTGRGTHLSLFFVVMRGKYDALLKWPFSQKVTLMLLDQNNREHIID
AFRPDVSSTSFQRPISEMNIASGCPLFCPLAKLAGKSSYLRDDTIFIKAIVDLTGL
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgctcagcactggcgacactgtaagtaaatggaaggctatggctcatccatctttaccc
tcctctttggactccacgttgcctggaatatctcgggatgtgctgtcggtgtccatggaa
tcaaaataccaatgtcaacagtgtaaagagatcctgcggaaaccgtaccaagcacagtgt
ggacatcgcttctgcgttttctgtttcaaacaactcaccagcacagggccgacaccctgt
gaagcctgccgtgccgagggtatttttgaggagtcgacttctatgcttgatataacagtg
gcatttcctgacaacgcagcacgaagagaaattgatagcttgcccgcaaaatgtccgaat
gaagggtgcagttggaatggactgctgaaagactatgagggtcagcatgaaggtcgctgt
gagtttgagcgtgttaaatgtgaagcatgtcaagcactcatcatgctcagcgagaaagac
cgtcacaatgaacgcgaatgtgaggccagaacgctcaactgcaaatattgcaaagtcaca
ttcaacttcaaagaaattaaggcacatgatgaaatttgtcagaagtttcctatgcagtgt
aaagattgtggcaaaaagaaaattccaagagaaaagtttcaagagcatgtcaagtcctgt
ccaaagtccaagtcagcgtgtcagttcagtgagatcggatgcagagcagtgttggacaat
ggtaagcagcaggaacatgagcagatgagcgtcatggagcacctgcgtctcatgttgggg
gttttgtcctctgtgcggctacgtcccgaaacaggcggagaatggcaagaagactctggg
ctgggattatatcgtggacccgaagacgcgcccctggtgggagctcacgccgcaccacat
aatgtgggacgaggaggcagtccgagcgtgcagcacaaagtcaccgcactggagaacata
gtatgcgttctgaatcgagaggtggagcgatctgcgctcacactggaggcgctgtcacgg
caacatcgaatagatcaggacaagatcgagaacttgtcgactaaggttagacagctggag
cgtactttaactatgcgagatctgcagttagcagaatccgagcagtctctgcgggagatg
cagttctgcacttacgatggagttttcatatggaaaatatcagatttctctcgccgcaga
caagacgctgtggggggccgagcacctgctatgttctcaccagccttctactccagtaaa
tatggctataagatgtgtctgagactctatctgaatggcgatggcactggcagaggcact
catctctctctcttctttgtggtcatgagaggcaaatatgacgccctgctgaagtggccc
ttcagccagaaggtgacattaatgcttttggaccagaacaacagagagcacatcattgat
gctttcagacctgacgtgagttcaacatccttccagaggcccattagtgagatgaacata
gccagcggatgccctcttttctgccccctcgccaagctagcgggcaaaagctcttacctg
agagatgataccatattcatcaaagccatagttgatctcacaggcttgtaa

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