Triplophysa dalaica: 130419591
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Entry
130419591 CDS
T09616
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw04010
MAPK signaling pathway
tdw04137
Mitophagy - animal
tdw04141
Protein processing in endoplasmic reticulum
tdw04210
Apoptosis
tdw04217
Necroptosis
tdw04621
NOD-like receptor signaling pathway
tdw04622
RIG-I-like receptor signaling pathway
tdw04920
Adipocytokine signaling pathway
tdw05132
Salmonella infection
tdw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130419591 (traf2b)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130419591 (traf2b)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130419591 (traf2b)
09143 Cell growth and death
04210 Apoptosis
130419591 (traf2b)
04217 Necroptosis
130419591 (traf2b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130419591 (traf2b)
04622 RIG-I-like receptor signaling pathway
130419591 (traf2b)
09152 Endocrine system
04920 Adipocytokine signaling pathway
130419591 (traf2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130419591 (traf2b)
09171 Infectious disease: bacterial
05132 Salmonella infection
130419591 (traf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130419591 (traf2b)
04121 Ubiquitin system [BR:
tdw04121
]
130419591 (traf2b)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130419591 (traf2b)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130419591 (traf2b)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
130419591 (traf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-C3HC4_2
zf-RING_5
zf-RING_4
zf-C3HC4_4
Paramyxo_NS_C
zf-U11-48K
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
130419591
NCBI-ProteinID:
XP_056602415
EnsemblRapid:
ENSTDLG00000013366
LinkDB
All DBs
Position
4:complement(7034139..7060484)
Genome browser
AA seq
536 aa
AA seq
DB search
MLSTGDTVSKWKAMAHPSLPSSLDSTLPGISRDVLSVSMESKYQCQQCKEILRKPYQAQC
GHRFCVFCFKQLTSTGPTPCEACRAEGIFEESTSMLDITVAFPDNAARREIDSLPAKCPN
EGCSWNGLLKDYEGQHEGRCEFERVKCEACQALIMLSEKDRHNERECEARTLNCKYCKVT
FNFKEIKAHDEICQKFPMQCKDCGKKKIPREKFQEHVKSCPKSKSACQFSEIGCRAVLDN
GKQQEHEQMSVMEHLRLMLGVLSSVRLRPETGGEWQEDSGLGLYRGPEDAPLVGAHAAPH
NVGRGGSPSVQHKVTALENIVCVLNREVERSALTLEALSRQHRIDQDKIENLSTKVRQLE
RTLTMRDLQLAESEQSLREMQFCTYDGVFIWKISDFSRRRQDAVGGRAPAMFSPAFYSSK
YGYKMCLRLYLNGDGTGRGTHLSLFFVVMRGKYDALLKWPFSQKVTLMLLDQNNREHIID
AFRPDVSSTSFQRPISEMNIASGCPLFCPLAKLAGKSSYLRDDTIFIKAIVDLTGL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcactggcgacactgtaagtaaatggaaggctatggctcatccatctttaccc
tcctctttggactccacgttgcctggaatatctcgggatgtgctgtcggtgtccatggaa
tcaaaataccaatgtcaacagtgtaaagagatcctgcggaaaccgtaccaagcacagtgt
ggacatcgcttctgcgttttctgtttcaaacaactcaccagcacagggccgacaccctgt
gaagcctgccgtgccgagggtatttttgaggagtcgacttctatgcttgatataacagtg
gcatttcctgacaacgcagcacgaagagaaattgatagcttgcccgcaaaatgtccgaat
gaagggtgcagttggaatggactgctgaaagactatgagggtcagcatgaaggtcgctgt
gagtttgagcgtgttaaatgtgaagcatgtcaagcactcatcatgctcagcgagaaagac
cgtcacaatgaacgcgaatgtgaggccagaacgctcaactgcaaatattgcaaagtcaca
ttcaacttcaaagaaattaaggcacatgatgaaatttgtcagaagtttcctatgcagtgt
aaagattgtggcaaaaagaaaattccaagagaaaagtttcaagagcatgtcaagtcctgt
ccaaagtccaagtcagcgtgtcagttcagtgagatcggatgcagagcagtgttggacaat
ggtaagcagcaggaacatgagcagatgagcgtcatggagcacctgcgtctcatgttgggg
gttttgtcctctgtgcggctacgtcccgaaacaggcggagaatggcaagaagactctggg
ctgggattatatcgtggacccgaagacgcgcccctggtgggagctcacgccgcaccacat
aatgtgggacgaggaggcagtccgagcgtgcagcacaaagtcaccgcactggagaacata
gtatgcgttctgaatcgagaggtggagcgatctgcgctcacactggaggcgctgtcacgg
caacatcgaatagatcaggacaagatcgagaacttgtcgactaaggttagacagctggag
cgtactttaactatgcgagatctgcagttagcagaatccgagcagtctctgcgggagatg
cagttctgcacttacgatggagttttcatatggaaaatatcagatttctctcgccgcaga
caagacgctgtggggggccgagcacctgctatgttctcaccagccttctactccagtaaa
tatggctataagatgtgtctgagactctatctgaatggcgatggcactggcagaggcact
catctctctctcttctttgtggtcatgagaggcaaatatgacgccctgctgaagtggccc
ttcagccagaaggtgacattaatgcttttggaccagaacaacagagagcacatcattgat
gctttcagacctgacgtgagttcaacatccttccagaggcccattagtgagatgaacata
gccagcggatgccctcttttctgccccctcgccaagctagcgggcaaaagctcttacctg
agagatgataccatattcatcaaagccatagttgatctcacaggcttgtaa
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