Triplophysa dalaica: 130424942
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Entry
130424942 CDS
T09616
Symbol
ptprfa
Name
(RefSeq) protein tyrosine phosphatase receptor type Fa isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw04514
Cell adhesion molecules
tdw04520
Adherens junction
tdw04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130424942 (ptprfa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130424942 (ptprfa)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
130424942 (ptprfa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tdw01009
]
130424942 (ptprfa)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130424942 (ptprfa)
Enzymes [BR:
tdw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
130424942 (ptprfa)
Protein phosphatases and associated proteins [BR:
tdw01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
130424942 (ptprfa)
Cell adhesion molecules [BR:
tdw04515
]
Immunoglobulin superfamily
Type II RPTP family
130424942 (ptprfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
fn3_2
ig
Interfer-bind
Tc-R-P
PTP-SAK
V-set
DSPc
Fn3_VIN3
Y_phosphatase3
C2-set_2
PTPlike_phytase
PTP-NADK
Fn3_PTPRU
Fn3_ELFN
MRH_ELAPOR1_9th
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
130424942
NCBI-ProteinID:
XP_056606913
LinkDB
All DBs
Position
6:complement(4093360..4261163)
Genome browser
AA seq
1919 aa
AA seq
DB search
MVPHARQASPRASATRLLLLLCLAVPIHADSMPSFIKIPEDQTGISGGVASFVCQAVGEP
KPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSVGEINTST
KLTVLEEDQIPHGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEISWFKDFLPVDINSS
NGRIKQLRSGGTPIRGALQIENSEESDQGKYECVAVNSAGTRYSAPANLYVRDQREVRRV
PPRFSIPPTNHEVMPGGSVNLTCVAVGAPMPYVKWMRGEVELTKEEEMPIGRNVLELTNI
RQSANYTCVAISSLGMIDTTAQITVKALPRPPTSLIVTETTATSVTLTWDSGNPEPVSYY
VIQYRAKISDNGFQEVDGVASTRYSIGGLSPYSEYEFSVMAVNNIGRGPPSVAVETRTSE
QAPSSPPLRVQARMLSATTMLVQWEAPEEPNGQIRGYRVYFTSDLHLPLSTWQKHNTEDG
SLTTISGLVPDITYGLRVLAFTSVGDGPPSDVLQVKTQQGVPAQPTSFEAEAELDTRIML
SWLWPVQDQIIKYELAYWEAGSDNKQHITFNPAGSYAVEGLKPDTLYKFSLAARSEMGLG
VFTQPIEARTAQSTPSAPPQQVHLLSLSSTSIQVSWAAPPVDSRHGHIVSYSLAYQATSG
EDQERHEVQEIPADVSSYVLEGLEKWTEYSVWVKAHTDVGPGPESSSTRIRTQEDVPGAP
PRRVEVDNVNSTALRVSWKPPLQQKQHGQIRGYQVVYSRLENGEPRGQPIIIDMELPEAQ
EAFITGLLPETTYSVTVAAYTTKGDGARSKAKVVTTTGAVPGKPTMIISTTIGNTALIQW
QPPKEMVGELMGYRLRYKREEDETYTARDFKRTDDHFTVTGLHKGATYIFKLCAKNRAGN
GEEYTKEISTPDDVPSSYPQNLRVVGLTTTTTKLAWDPPPLPERNGKIVRYVVVYRDINS
LQNQTNGTAETQMTIHGLQPDTTYDIRVRAFTGKGGGPLSPSIQSRTMSTSMPEFTKNFG
VKAVMKTSVLLTWEVPETYKSQVPFKILYNQQSVEVQGDLKRKLITRLQPDTDYSFVLMS
RGNSAGGLQQQVSIRTAPDLFITKPVLYKQDPEEGGKLTITLPKVHNSALVRWFYVVVVP
VTTSTLRRWENPEDMDLDELLEGGGDSDVRKRRRRQTQDFLQPYIAAKLDLLPETFVLGD
EKSYNSYYNKPLPGQQQYRTFIMAELKDRDSMFTVSPYSESMMVKLHNGMSRHVEDPEML
WVMGPVLAVVLIIIIVIAILLFKSKQERKRTSPSAKDEHSAGVKDHLLANSSDPVEMRRL
NYQTQGSSAFSCPDTPRMREHPPVSVCALADHIERLKANDGLCFSQEYESVDPGQQFTWE
NSNLEVNKPKNRYANVIAYDHSRVVLNPIDGVPGSDYINGNYVDGYRKQNAYIATQGPLP
ETLSDFWRMMWEQRTNTIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTVLDTVELATY
SVRTFALYKNGSSEKREVRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHC
SAGVGRTGCFIVIDAMLERMKHEKLVDIYGHVTCMRAQRNYMVQTEDQYIFIHEALLEAA
TCGNTEVPARSLYTHIQKLTQIPTGDAVTAMELEFKKLANSKAHTSRFISASLPCNKFKN
RLVNIMPFESSRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLW
EHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDAR
DGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGV
FITLSIVLERMRYEGVVDMFHTIKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atggtgccacatgcccgacaggcctctccccgtgccagtgccacacgcctcctgctgctc
ctctgcctggccgtgccaatccatgcagacagcatgcccagttttattaagattcctgaa
gatcagacaggcatctctggaggggtggcttccttcgtgtgccaggcggtcggagagcct
aagccacgcatcacctggatgaagaagggaaagaaagtcagctcgcagcgctttgaggtg
atagaatttgacgacggctcgggttcagtgctgaggattcagcccttgcgaacgcatcga
gatgaggccatttacgagtgcacggccaccaacagcgttggagaaattaacaccagcact
aaactcactgtactggaagaggaccagatcccgcacgggttccccaccatagacatgggc
ccacagctgaaggtggtggaacgaacgagaacggccaccatgctttgtgctgcgagcggc
aaccccgacccggagatctcctggtttaaagacttccttccggtcgacattaacagcagc
aacggcagaatcaaacagctccgttcaggtggtacaccaatcagaggggcgctacagatt
gagaacagtgaggaatccgaccagggcaagtatgagtgtgtggcggtgaacagcgcagga
acgcggtactcggctcctgccaacctctacgtcagagaccaacgggaagtccggcgggtt
ccgccacgcttctcaatcccgcccaccaatcacgaggtgatgccgggcggtagcgttaac
ctcacctgcgtggcggtgggtgcgcccatgccctacgtgaagtggatgaggggtgaggtg
gagctcactaaagaagaggagatgcctatcggacgaaacgtgctggagctcaccaacatc
cgccagtcagctaactacacctgcgtggctatttcctctctgggtatgattgatacaaca
gctcagatcactgttaaagctctgccccgccctcccacctctctcattgtcacggaaacc
actgccaccagcgtgactctcacgtgggactccggaaaccccgaacccgtgtcatactac
gtgatccaataccgggccaaaatctcagacaacggctttcaggaagtggacggcgtggcc
tccacgcgctacagtatcgggggtttgagcccatactccgaatacgaattcagtgtcatg
gcggtcaataacatcggccgtggcccacccagcgtggcggtggagaccaggaccagcgag
caggccccctcgtctcctcccctacgggtccaggctcggatgctcagcgccacaaccatg
ctggtgcagtgggaggcacccgaagagcccaacggacagatacgtggatatcgagtgtac
ttcacgtccgatctgcacttgcccctcagcacttggcagaaacacaacacggaagacggc
agcctgaccacaatctccggcctggtgcctgacatcacatacgggttacgtgtgctagcg
ttcacctcggtgggcgacggaccgccttcagacgtactgcaagtcaaaacgcagcaagga
gtcccggcccagcccaccagctttgaagcagaggctgaacttgacacacggatcatgttg
tcttggctgtggcccgtacaagaccagatcatcaaatacgagcttgcgtattgggaagct
ggatctgacaacaagcagcacatcacttttaacccagcgggttcttatgctgtcgaaggg
ttgaagccagacaccctctacaagttctcattggccgctcgctctgaaatggggctcggt
gtgttcacacagcccatagaggctcggacagcgcagtccaccccgtccgccccaccacag
caagtgcacctgctcagtctctcctccaccagcatccaggtgagttgggcggctccaccc
gtcgatagtcgtcacggacacatcgtcagctactcacttgcctatcaggccacgtcgggt
gaagaccaagaacggcacgaggtgcaagaaatcccagctgatgtgtccagctacgttctg
gaggggttggagaaatggacggagtactcggtttgggtcaaagcacacacagatgttggg
cccggtcctgagagcagcagcacccgcatcagaacgcaagaggacgtgcctggcgctcct
ccacgcagagtcgaggtggacaacgtgaactccacggccttgcgcgtgtcctggaagcct
cctctgcagcagaagcagcacggacagatccgtggctatcaggtggtgtactcacggctg
gagaacggggagccacgtgggcagcccatcatcatagacatggaattgccagaggcacag
gaggctttcatcactggtctgttgcctgaaacaacatattctgttaccgtggcagcctac
accactaaaggagatggagcaagaagcaaagccaaagtggtgaccactacaggggcagtg
cctggcaagcccaccatgatcatcagcaccaccatcgggaacacagctcttatccagtgg
cagccccctaaagagatggtgggtgaattgatgggctacagattgcggtacaagcgtgag
gaagatgagacctacaccgcccgtgacttcaaacgcacagacgatcacttcaccgtcaca
ggcctgcacaagggtgccacatacatctttaagctctgcgccaagaaccgagcgggaaat
ggagaggagtacaccaaagagatcagcaccccagatgatgtacccagcagctacccccag
aatctcagagtggtgggcctgacgaccactaccaccaaactggcgtgggaccctccgcct
ctacccgagaggaatgggaagatcgtgcgctacgtggtggtgtaccgtgacatcaacagc
cttcaaaaccagaccaacggtaccgcggagacgcagatgaccatccacggtctgcagccg
gacacaacctatgacatcagagtgagagcgttcacaggaaagggaggtggtccgttgagc
cccagcattcagagcagaaccatgtctacctccatgcctgagttcaccaaaaactttggt
gttaaagctgtgatgaagacctcagttctgctcacgtgggaggtgcccgaaacctacaag
tctcaagtgcccttcaagatcctttataaccagcagagcgttgaggtgcagggcgatctg
aagaggaagttgatcacgagactacagccggacaccgattactcttttgtgttgatgagt
cgaggaaacagcgccggtgggcttcagcagcaggtctccattcgtaccgccccagacctc
ttcatcaccaaacccgtcctttacaaacaagacccagaagaaggaggcaaactcaccatc
acactgcccaaagtgcacaacagcgccctcgtcaggtggttttatgtagtggtggtacca
gtaactacatccacgctacgccgctgggaaaacccagaagacatggatctggatgagctt
ttggagggcggtggagactcagacgttaggaagagaaggagacggcaaactcaggacttc
ttgcagccgtacatcgctgccaagttggatttacttccagagacctttgtgttaggagat
gagaagagttacaacagttactataacaaacctctacccggccagcaacagtaccgcaca
tttatcatggcagaactgaaagatcgggactcgatgtttaccgtgagtccatactctgaa
tccatgatggtgaagctccacaacgggatgtcccgtcacgtggaagacccagagatgctg
tgggtgatgggacctgtgctggccgtcgttctcatcatcatcattgttatcgccattttg
ctcttcaagagcaaacaggagaggaagcgcacctcaccttcggcgaaagacgagcactca
gctggagttaaagatcatttattggctaattcttctgacccagtggaaatgaggagactc
aactaccagacacaaggatccagtgccttcagctgccccgacaccccaagaatgcgagaa
caccctccagtttctgtctgcgctttggctgaccacatagagcgactgaaagccaacgac
ggcctgtgtttctctcaggaatacgagtctgttgatcctggtcagcagttcacctgggaa
aattccaacctagaagtcaacaaacccaagaaccgatatgcaaatgtcatcgcttacgat
cactcccgagtcgtgctgaaccccattgatggcgtaccaggaagtgactacatcaatggc
aactacgtcgacggctaccgcaagcagaacgcctacattgccactcagggtccactgcca
gagacgctcagtgacttctggaggatgatgtgggagcaaaggaccaacaccatcgtcatg
atgaccagactggaggagaagagcagggtgaagtgtgaccagtactggcccagtcgtggg
actgaaacatacggcatgattcaggtgaccgtgctggacaccgtggagttggccacctat
agcgtccgaaccttcgctctgtataagaacggttccagtgagaaacgggaagttcggcag
ttccagtttatggcctggccggatcatggagtccctgaatacccaacccccattttagcc
tttctgcgcagagtaaaggcctgcaatccacctgacgctggacccatggtggttcactgc
agtgctggcgtgggtcgaacgggctgtttcatcgtaatagatgccatgctagagcgaatg
aagcacgagaagttggttgacatctacggtcacgtgacctgcatgcgggctcagaggaac
tacatggtgcagacggaggatcagtacatcttcatccacgaagctctgctggaggcggcc
acctgcggcaacacggaggtcccggcacgcagtttatacacacacatccagaaactcacg
cagattccgaccggagatgctgtaaccgccatggagctggagtttaagaaactggccaac
tcaaaagcacacacctcaagattcatcagcgccagtctgccctgcaacaaattcaagaac
cgactggtcaacatcatgccatttgagtccagtcgtgtgtgtctgcagccaatcagagga
gtggaggggtccgactacattaatgccagtttcattgatggatacaggcagcagaaggct
tatatagcaacgcagggtcctctggctgaaaccaccgaagacttctggaggatgctttgg
gagcacaattccaccatcgtggtgatgctgacgaagctcagagagatgggacgggagaag
tgtcatcagtactggcctgctgaaagatctgcacgctaccagtactttgtcgtggacccc
atggctgaatacaacatgccccagtacatcttaagggagtttaaagtcacggacgcccgg
gatggccagtctaggacgatccgccaatttcagttcaccgattggccggaacaaggtgtg
ccaaagacaggagagggctttattgatttcattggccaagttcacaaaaccaaggagcag
ttcggacaggacggaccaattactgttcactgcagtgctggtgtgggccgaacgggcgtg
ttcatcactctgagcatcgtgctggaacggatgaggtatgaaggtgtggtggacatgttc
cacaccatcaaaacgctgcgcactcagagacctgccatggtacagacggaggatcagtat
cagctgtgttacagagcagctttggagtacctaggcagctttgatcactatgcaacgtaa
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integrated database retrieval system
