Triplophysa dalaica: 130425514
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Entry
130425514 CDS
T09616
Symbol
pdgfbb
Name
(RefSeq) uncharacterized protein pdgfbb
KO
K04359
platelet-derived growth factor subunit A
Organism
tdw
Triplophysa dalaica
Pathway
tdw04010
MAPK signaling pathway
tdw04020
Calcium signaling pathway
tdw04510
Focal adhesion
tdw04540
Gap junction
tdw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130425514 (pdgfbb)
04020 Calcium signaling pathway
130425514 (pdgfbb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130425514 (pdgfbb)
04540 Gap junction
130425514 (pdgfbb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130425514 (pdgfbb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tdw04052
]
130425514 (pdgfbb)
00536 Glycosaminoglycan binding proteins [BR:
tdw00536
]
130425514 (pdgfbb)
Cytokines and neuropeptides [BR:
tdw04052
]
Cytokines
Growth factors (RTK binding)
130425514 (pdgfbb)
Glycosaminoglycan binding proteins [BR:
tdw00536
]
Heparan sulfate / Heparin
Growth factors/receptors
130425514 (pdgfbb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
Epimerase_2
PDGF_N
Motif
Other DBs
NCBI-GeneID:
130425514
NCBI-ProteinID:
XP_056607689
LinkDB
All DBs
Position
7:complement(7122604..7130593)
Genome browser
AA seq
519 aa
AA seq
DB search
MRSRIPLLLAVLAAACLQFGSAEGDPLPAAVVDLVKSGSVSSVQDLQFLLSIEVEPDDHS
YNDSSNRLPRSLDAQPAQQAVCKVRTEVIEVTRSMLDRSNTHFMLWPPCVEVQRCSGCCN
TKSLQCVPVLTHTRYLQVMKIQYVNKRPLYDKAVVSVLDHVDCRCQPVPRTTQRKKSSTN
KQEPRDRSGKSHSKVELHQRDEFKPNQRLSLEDLLSHSWIPKERLHESGPPDAFLPSGDI
KLHTGRDGWGLNETQYGGGKGHHHYPVDAQRHHGSTNDTGVTGPLPNHTEKAEIEDVDSL
NNLTKAVERERSNAQNNANRSTTNRTTEYKITPTELTNKTLRHQSNLKHEINHTGSKEVD
QLQRHNLNFAGTNQTDQIVSESAEKAKQHQGDLFRPLEVNNKTSDVEKREDEKEDDKMSP
EQKPKDKEMEDLLLLHKLLEDEEKQKHHLKAQQTNREQDEKLQHLHHKQHTTTQQTGTIS
PPLQRSPPRTPPRPPPQPPNRRRKQRKRISKSAMRALLM
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagatcgcggatcccgcttcttctcgcggtgctggcggcggcgtgtctgcagttcggc
agcgcggagggcgatcctctcccggctgctgtggtcgatctggtaaagagtggatctgtg
tcgtctgtgcaggatttgcagtttctattgtccatagaggttgagccagatgatcacagt
tacaatgacagcagtaaccgtctgccacggagtctcgatgctcagcccgctcagcaagcc
gtctgtaaggtccggacggaggtcattgaggtcacacgctccatgttggaccgtagtaat
acacatttcatgttgtggcctccatgtgtggaagtccagaggtgttcaggctgctgtaat
accaaaagtttgcagtgcgttcctgtactcacacacacacgataccttcaggtgatgaag
atacaatacgtgaacaagcggccgctctatgacaaggctgtcgtctctgtcctcgatcac
gtagattgccgctgtcaaccggttcctcgcaccacccagcgcaagaagtcgtccaccaac
aaacaggaaccacgcgatcgttcaggaaaatctcactctaaagttgagctccaccagagg
gacgaattcaaacccaaccagaggctcagcttggaggacctgctcagccacagctggata
ccaaaagagaggctccacgaatcgggaccaccagatgcttttctaccctctggggatatc
aagctccacacaggccgtgacggctggggtctgaacgagacgcagtatggcgggggcaaa
ggtcatcaccattaccctgtcgatgcacagagacatcatggcagcacaaatgacacgggg
gtgacgggtccgttaccgaatcacacagagaaggcagaaattgaggacgtagattctctg
aacaatttaacaaaggctgttgaaagagaacgatcaaatgcacaaaacaatgccaaccga
agtacaaccaatcggacaacggaatataagattacgccaacggaactgacaaataaaact
ttgaggcatcagtcaaatctcaaacacgaaatcaatcacacaggaagtaaagaagtggat
cagttacaaagacacaatctcaattttgcagggaccaatcaaacggatcagattgtctcc
gaatcggcagagaaagccaaacaacatcaaggagatttgtttcggcctcttgaggtgaac
aataagacttcagatgttgagaagagagaggatgagaaggaagatgacaagatgagccca
gaacaaaaaccaaaggacaaggagatggaggacctgctgttactgcacaaacttttagaa
gatgaagaaaaacagaaacatcacctcaaagctcaacaaacgaacagagaacaggatgag
aaactacagcacctccaccacaaacaacacacaaccacacaacaaacaggaaccatatct
cctccattgcagcgttctcctccgcgcacacctccccgacctccgccacagccaccgaat
cgcagaagaaaacagcgtaaacgcattagcaaatcagccatgagagctcttctcatgtag
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