KEGG   Triplophysa dalaica: 130426882
Entry
130426882         CDS       T09616                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
tdw  Triplophysa dalaica
Pathway
tdw03420  Nucleotide excision repair
tdw04110  Cell cycle
tdw04114  Oocyte meiosis
tdw04120  Ubiquitin mediated proteolysis
tdw04141  Protein processing in endoplasmic reticulum
tdw04310  Wnt signaling pathway
tdw04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    130426882 (rbx1)
   04120 Ubiquitin mediated proteolysis
    130426882 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    130426882 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    130426882 (rbx1)
   04350 TGF-beta signaling pathway
    130426882 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    130426882 (rbx1)
   04114 Oocyte meiosis
    130426882 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tdw04121]
    130426882 (rbx1)
   03400 DNA repair and recombination proteins [BR:tdw03400]
    130426882 (rbx1)
Enzymes [BR:tdw01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     130426882 (rbx1)
Ubiquitin system [BR:tdw04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   130426882 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     130426882 (rbx1)
   Cul2 complex
     130426882 (rbx1)
   Cul3 complex
     130426882 (rbx1)
   Cul4 complex
     130426882 (rbx1)
   Cul7 complex
     130426882 (rbx1)
   Cul8 complex
     130426882 (rbx1)
   Cul9 complex
     130426882 (rbx1)
DNA repair and recombination proteins [BR:tdw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      130426882 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      130426882 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 130426882
NCBI-ProteinID: XP_056609839
LinkDB
Position
7:6803630..6805407
AA seq 108 aa
MAAAMDVDTPSGANSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggccgcgatggatgtagacaccccaagtggagctaacagcggagctagcaagaag
cgttttgaagtaaaaaagtggaatgcagtggcactgtgggcttgggacattgtggtggac
aactgtgccatttgcagaaatcacattatggatctttgtatagagtgtcaagctaaccaa
gcctcggctacatcagaagagtgcacagtggcctggggagtctgcaatcacgcttttcat
ttccattgcatctctcgctggctgaagaccagacaggtgtgtcccctggacaacagagag
tgggagtttcaaaagtatggccattag

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