Triplophysa dalaica: 130427828 Help Entry 130427828         CDS       T09616                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism tdw  Triplophysa dalaica Pathway tdw04010   MAPK signaling pathway tdw04120   Ubiquitin mediated proteolysis tdw04140   Autophagy - animal tdw04144   Endocytosis tdw04620   Toll-like receptor signaling pathway tdw04621   NOD-like receptor signaling pathway tdw04622   RIG-I-like receptor signaling pathway tdw05132   Salmonella infection tdw05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:tdw00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     130427828 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     130427828 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     130427828 (traf6)    04140 Autophagy - animal     130427828 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     130427828 (traf6)    04621 NOD-like receptor signaling pathway     130427828 (traf6)    04622 RIG-I-like receptor signaling pathway     130427828 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     130427828 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     130427828 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tdw04131]     130427828 (traf6)    04121 Ubiquitin system [BR:tdw04121]     130427828 (traf6) Enzymes [BR:tdw01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      130427828 (traf6) Membrane trafficking [BR:tdw04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     130427828 (traf6) Ubiquitin system [BR:tdw04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     130427828 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 TRAF3_RING RING_XB3-XBAT31 U-box DM zf-RING_11 zf-TRAF_2 Motif Other DBs NCBI-GeneID:  130427828 NCBI-ProteinID:  XP_056611505 LinkDB All DBs Position 1:11480768..11484677 Genome browser AA seq 542 aa AA seqDB search MACSDTEKSSLGAACCDSDYSSCAAAMQKESERERESYLSPTENPSTISIPPDQQGYDVE FDPPLESKYECPICLMGLRSAVQTPCGHRFCQSCITKSIRDTGQKCPVDNEVLLEEQLFP DNFAKREILSLTVRCPNVGCDDKMELRQLEKHLSLCKFATEQCTQCHESVRIIYLDEHKT QQCLKRFMTCPDCAGSFVYADRQIHEQMCPFASTVCNYCGMELIRDQLAVHCDTDCLKAP VACSFSTFGCREKMARNYLAQHMQEFTQMHMRYMAEFLRTQTLNSSLTPPVISHFPMDER NASSRVPEPCQCSQELVILRETVLELEGRLVRQDQQIRELCIHNETQKTQLTEVRLKLCS LEEATRELEAQQYQGVYVWRLENFSAHLQNQEAGQSVVLHSPPFYTGRPGYKLCLRLHLQ TPNAPRCSNYISLFLHTMQGQFDSQLSWPLQGSIRLAVLDQVEGQHHVEVMETKPDLQAF QRPTVQRNPKGFGYVTFLHLQALRQRGFVKEDVLLVRCEVTPQSDASLRREGVQPRGPEP SP NT seq 1629 nt NT seq  +upstreamnt  +downstreamnt atggcttgcagtgacacagagaagtccagccttggtgctgcttgctgtgatagcgactac tccagttgcgccgcagctatgcagaaagagagcgagagagagagggagtcatatctcagc ccaactgagaacccctcgaccatcagtatcccaccggaccaacaaggttatgatgtagag tttgaccctccgctagaaagcaagtatgaatgtccgatctgtctgatgggtctcaggtcg gcagtacagacaccgtgtggacatcgattctgccagtcgtgcatcacaaagtccatcaga gacactgggcaaaaatgtccagttgacaatgaggtgctgctagaagaacagctttttcct gataactttgccaagcgagagatcctctcactgacagtccgctgccctaatgtaggttgc gatgataaaatggagttgaggcaattggaaaaacatttatctctgtgtaaatttgccaca gagcagtgcactcagtgtcacgagtctgttcgtataatctatctggatgagcataagacc cagcagtgcttaaagcgcttcatgacctgtcctgactgtgccgggagttttgtgtatgct gacagacagattcatgaacagatgtgtccttttgctagtacagtgtgcaactattgtgga atggagcttattcgagatcagttggcagtgcattgtgacacagactgtctaaaagctcct gtagcctgttccttcagcacctttggttgtcgtgaaaagatggcaagaaattatctggcc cagcacatgcaggaatttacacagatgcacatgcgttacatggccgagtttttgcgcacc cagacactcaatagctcccttacgccgccggttatcagccacttcccgatggatgaacgt aacgcctcctcacgggtgccagagccttgccagtgcagccaggagttggtgatcttgcgt gagacagtcttggagttagagggccgattggttcgtcaagaccaacagatccgagagcta tgcattcacaacgagacgcagaaaacccaactcactgaggtccgtcttaagctttgctca ttagaagaggccacacgagagctggaggctcagcagtaccaaggcgtctacgtgtggcgc ctggaaaacttctctgcccatctgcaaaaccaggaggctggccagtctgtggtccttcat agcccacctttctacacgggtcggccagggtacaaactttgccttcggctgcacttgcaa acccccaacgctccccgctgttccaactacatctcgctttttttgcacactatgcagggg cagtttgacagccagctctcctggcctttacagggctcaattcggctggcagtgctggat caagtcgagggccagcaccatgtggaagtaatggagaccaagccagacctgcaggccttc caacggcccactgtacagcgcaaccccaaaggttttgggtacgtcacttttcttcatcta caggctttgcggcagcgtggctttgtgaaagaggacgtgctgcttgtgcgatgtgaggtc acaccacaatccgatgccagcctcaggcgtgagggggtccagcctcggggaccagaacct tcaccttga

DBGET integrated database retrieval system