Triplophysa dalaica: 130428587
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Entry
130428587 CDS
T09616
Symbol
tiam1b
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw04530
Tight junction
tdw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130428587 (tiam1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130428587 (tiam1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_2
PDZ_6
DH_Alsin
Motif
Other DBs
NCBI-GeneID:
130428587
NCBI-ProteinID:
XP_056612720
LinkDB
All DBs
Position
9:complement(21159231..21215674)
Genome browser
AA seq
1594 aa
AA seq
DB search
MGNTESHSSSHGYYGDGQRHLSRKHMSRSLRLSNKQTYCSRRTPSGKPEHRNSETSTRSS
STPSIPQSLADHGLEPFNDSDMLPDFSGPIWVDRVAMNLRPMSFHNHPAQSPATTRNVPS
KQPAKETDKPPEDHAQQTRDGSQEGASFKKKRSKSADMWREDSLEVSLSDLSQEHLTSTE
EIGDTPDEKDFADLQSSPQGLESMDSNRANSLDELYGPKSPACRPTHGRYAKWHKAGAAG
RDCEDDKLLSLCEDDGAAYGAYTLPCRRSHCLSEGPTNHQGVMQGRRAQTIQDVTAGDGS
DYEDSGIDGLTGESEASQHQVRRYKTMSVSFSAYSTSTGGAFAGSDSGSSSGAGTGPSEA
TLGVYENFRQELEQSASPAELPEERSSAFSDEQSHVTLSSAYHTDPLLTVAAQGTVRKAG
RLAVKNFLVHKKNKKVELATRRKWKSYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWAE
NSIVQAVPEHPKKDFVFCLSNSLGDSFLFQTCSQTELENWITAIHSACAAAVARQHHRED
TVRLLRAEIRKLEQKIDMDEKMKKMGDMQLSAVTDTKKRKTILDQIFLWEQNLEQFHMDL
FRFRCYLSSLQGGELPNPKRLLAFASRPTKLAMGRLGIFSVSSFHALVAARTETGVRRRT
HAMSRSTSKRKSRFSSLWGLDTHSKRKSKAHPTITQVFAEGEDPVKSPMEGLFEGSARES
TKETKTPVKGLPRPSTEQDLWSKDHLTPSWVCLPNDQPVLAIIQPGETALDMLETICKAH
QLDPTKHYVWLKFLIENQVQFYIPKPEEDIYDLLYKEIELCCKIRKVIQFDRDESCMIGY
GFSISVVEEDGIQQLYITDVRAGGLAFAKGLNAGDEILQLNRKDAHTLTFNDMKVAFAQV
SLSLTVNTLPPVDRRQLCFLPPRRSDAVDNLYTDIFSQSQEEILDDSVGLIVETSGDSLE
DDTELFAEFDDYGKSTEQVAAFCRSLHEMNSSSEGVSSSSGQEYSSLPPSNTTPRQLSDA
DKLRKVICELVETERTYVKDLNCLIGRYLTPLQQESFLTQDELDVLFGNLPEMLEFQVEF
LKTLEDGTRLVPDLEKLERVGEFKKILFSLGGSFLYYADRFKIYSAFCASHTKVPKVLVK
AKTDAAFKAFLEERNPKQQHSSTLESYLIKPIQRVLKYPLLLRELHSLTDPDSEEHYHLD
VAMKAMNTVASHINEMQKIHEEFGAVFDLLISEQTGEKKEVADLSMGDLLLHSSVTWINP
SSTLGKCKKEPQLATFVFKTAVVFICKDSKQKKKMGGSHRASVSGEERDPFRFRHMIPTD
ALQVRTLSSTDGESAAVCEIIHVKSESEGRPERVFQICCSSPESKKDFLKTVHSVLRDKQ
RRQLLKTESLPLSQQYVPFGGKRLCALKGARPAMNRAVSAPTRTLGRRKLVRNRFTIDTD
IVFDTEPDSDSPDSQHSQQQGGDPAGDTDRWVEEQFDLQRYEDQEQDVKESDVLSDDDEF
CQSALSPDAEGPLSALSLEGDTAEEEEEEEQGGDEESKKEVKDYKSQHAKLSDVGKQSAM
SVASVDEQAVSDEVIWVRRDHSSTENETADEQES
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacacagaaagtcacagcagcagccatggttactatggcgatgggcagcgccac
ctctcccgtaagcacatgtcccgttctctccgtctgtccaacaagcagacatactgttcc
cgccgcacaccgtctggaaaaccagagcaccgcaactccgaaacaagcacgcgctcaagc
agcactcccagcatccctcagtcgctggccgaccacggcctggagcccttcaatgactca
gacatgctgcccgacttcagcggacccatatgggtggaccgtgtggccatgaacctcaga
cccatgtcctttcacaaccatccggcccaatcgcccgccacgacccgtaacgtcccctcc
aaacagcctgcgaaggagacggacaaaccaccagaggaccatgcccaacagacacgggac
ggttctcaagagggcgccagctttaaaaagaaacgctccaagtctgcagatatgtggaga
gaagactctctcgaggtgtctttgtcagatctgagccaggagcatctgaccagcacggag
gagattggagatacgcccgatgagaaggactttgcagacttgcagtcgtctcctcaaggt
ctggagtcgatggactccaaccgtgccaattctttagacgagctgtacggaccaaagagt
cctgcctgcaggccgacgcatggacgatacgccaaatggcataaggccggcgctgcaggt
agagactgtgaagacgataaattattatcactgtgtgaagacgatggtgccgcttatgga
gcgtacacactgccctgtcgccggtcacactgtctgtctgagggaccgaccaatcatcaa
ggagttatgcagggaaggcgggcacaaaccatacaggatgtcacggcaggagacggcagt
gactacgaggacagcggcatcgatggcctgacaggagagagcgaggcgtctcagcaccag
gtgcggcgctacaagaccatgtcagtgtcgttttctgcttactccacgtcaacagggggc
gccttcgccgggagcgacagcgggagcagcagcggtgcggggacgggaccctccgaggca
acactgggcgtctacgagaactttcgtcaggagctggagcagagcgctagtcctgcggag
ttgcccgaggaacgaagctccgccttcagcgacgagcagagtcatgtgaccctgagctcc
gcctaccacacggaccccctgctcaccgtggctgcacagggcaccgtgcgcaaagccgga
cgcctcgccgtcaagaacttcctggtgcataagaaaaacaagaaggtggaactcgccact
cgcaggaagtggaagagctactgggtgtctcttaaagggtgcactttgtttttctacgag
acggacgggcggtccggcatcgatcacaacagcgtccctaaacacgcagtgtgggcagaa
aatagcattgtgcaggccgtccccgaacaccccaaaaaagattttgtcttctgtctaagt
aactcgctgggagactctttcctttttcagacctgcagtcagacagagttggaaaactgg
atcacggctatccactcggcctgcgccgcagccgtggcccgtcaacaccaccgtgaagac
acggtacgtctcctgcgagcggagatccgtaagctggagcagaagatcgacatggacgag
aagatgaagaagatgggagacatgcagctgtcagctgtaaccgacaccaagaagaggaag
accatcctcgatcagattttcctgtgggagcagaatttagagcagttccacatggattta
ttccgattccgctgttacctgtccagcctgcagggcggcgagcttcccaaccccaaacgc
ttgctggctttcgcatctcgtccaaccaaactggccatgggacgactgggcatcttctcc
gtctcatcctttcatgctctggtggcggctcgcactgagacaggcgtgaggcgacggacg
catgcgatgtcacgttccaccagcaaacgaaagagtcgcttctcgtcactgtggggctta
gacacccactccaaaagaaagagcaaagcacaccctactattacccaggtttttgcagaa
ggtgaagacccggttaaaagccctatggaaggtctgtttgaagggtctgccagagaatca
acaaaagaaaccaagacgccagtgaaaggactgccaagacccagcacggagcaggacctc
tggtccaaagaccacctcactccatcatgggtgtgtctgccaaatgatcagcccgtgtta
gccatcatccagcccggagaaacggctctagatatgctggaaaccatctgcaaggctcac
caactggatcccacgaaacactacgtgtggcttaagtttctcattgagaatcaagtgcag
ttctacatccctaaaccagaagaggatatttatgatctgctgtataaggagatcgagctg
tgctgtaagataaggaaggtgatccagtttgatcgagatgagtcgtgtatgattggatat
ggtttctctatatctgttgttgaagaggacggcatacagcagctctacatcactgatgtc
agagctggaggattagcgttcgctaaagggctgaatgctggagatgagattctgcagttg
aacagaaaggacgctcacacactgaccttcaatgacatgaaggtggccttcgctcaggtc
tcgctctctctcaccgtcaacacgctgccccctgttgaccgccgacagctttgctttctt
cccccgagacgctcggatgccgtggacaacctctacacggatatcttctcgcagagtcag
gaggagattcttgacgacagtgttggtctgatcgtggagacgtcaggagatagtttagag
gacgacactgagctcttcgctgagttcgatgactatggaaagagcacagagcaggtcgct
gctttctgccgcagtctgcacgagatgaattcttcatccgagggcgtctcttcctcatcc
ggacaggagtattcctcgctgcctccgagcaacaccacccctcgacagctctctgatgcc
gacaaactccgcaaagtcatctgcgaattggtcgaaacggagcgcacctatgtcaaagat
ctgaactgtctgatcgggcgatatttaacccctctacagcaggagtccttcctcactcag
gatgagctggacgtgttgtttggaaacctgcccgagatgctggaatttcaggtggagttt
ctgaagacgctggaggacggaaccagactggtgccagatctggagaaactggagcgagtg
ggagagttcaagaaaatcctcttctctctgggcggctctttcctgtattacgccgatcgc
ttcaagatctacagcgctttctgcgccagtcacaccaaagtacccaaagtgttagtcaaa
gccaagacagacgcggccttcaaggcgttcctggaagaacgcaaccccaaacagcagcat
tcatccacgctggagtcgtacctgatcaaacccatccagagagtgttgaaatatcctctt
ctgctgagagagctgcactcgctcactgacccggacagcgaggaacattaccatctcgat
gttgcgatgaaggccatgaacacagtggccagtcacatcaacgagatgcagaagatccac
gaggagtttggagccgtgtttgatcttctcatttccgaacagactggagagaagaaagag
gttgccgacttgtcaatgggagatttactcctccacagcagcgtgacatggatcaacccg
tcctccacactggggaagtgcaagaaagagccacagctggccacgttcgtgttcaaaact
gcggttgtgttcatctgtaaagactccaaacagaagaagaaaatgggtggctctcacaga
gcatccgtctcgggtgaagaaagagacccgtttcgtttccgtcacatgatccctaccgat
gcgcttcaagtgcgcaccctgtcgagcacagatggagagagcgcagccgtgtgtgagatc
atccacgtgaagtctgaatctgaggggagaccagaaagagtatttcaaatctgctgcagc
tctccagaaagcaagaaagactttttgaagacggttcactccgtactccgagataagcag
cgtcgtcagttgttgaagaccgaaagtcttcctttgagccaacaatacgttcctttcgga
ggaaagcgtctgtgtgctcttaaaggagcccgtcccgctatgaacagagcagtttctgcc
ccgactcgcactctgggccgaaggaaactagtgcgcaaccgcttcaccatcgacacggac
attgttttcgacaccgaacccgacagcgactcgccagattcccagcattcccagcagcag
ggcggagatccggccggagacacggaccgctgggtggaagaacagttcgacctgcagcgc
tacgaggaccaggagcaagacgtgaaagaatcggacgttctgagcgacgatgacgagttc
tgtcagtccgctttgagcccggacgcagaagggccgctctccgctctctcgctggagggg
gacacggccgaggaagaggaggaggaagagcagggaggagatgaggagagcaagaaagag
gtcaaggactacaaatcccagcacgcgaagctgtctgacgtaggaaagcagtctgccatg
tcggtggccagcgtagacgagcaggcggtgtctgatgaggtcatctgggtgcgacgggac
cacagcagcacagagaacgagacagcagacgaacaggaaagctga
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