Triplophysa dalaica: 130429436
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Entry
130429436 CDS
T09616
Symbol
si:ch1073-335m2.2
Name
(RefSeq) msx2-interacting protein isoform X1
KO
K25100
Msx2-interacting protein
Organism
tdw
Triplophysa dalaica
Pathway
tdw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130429436 (si:ch1073-335m2.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130429436 (si:ch1073-335m2.2)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
130429436 (si:ch1073-335m2.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
130429436
NCBI-ProteinID:
XP_056613971
LinkDB
All DBs
Position
10:complement(54859..73470)
Genome browser
AA seq
3141 aa
AA seq
DB search
MVRETRHLWVGNLPEHVREEKIVEHFKRYGRVESVKVLRKRGSEGGVAAFVDFVDIKSAQ
KAHNAVNKMGDRDLRTDYNEPGSVPSAVRGLEDSSPSSSHGREVAGFSRGSVGPVYGPPV
SLHTREGRYERRLDGSSDSRERAYEHSPYGHHERGGSFDRPRHYNTDYYRDRSMFASAVS
SSPGASSISGGFDTPESHFESRIRDSFTLSSSARRDPYREDRGRRADRTYHHRRSRSSHS
SQSRHPSPQRSTGQNPKAPPSPKRTPVSPGRGPRSRSRSQSSSSDSVSSTSSTGSGSSDS
NSSSSEGSRARSVQSAATHAPPPPPTLALDPDEPRRSFGIRVQNLPTRSTDTSLKDGLFH
EFKKYGKVTSVQIHGALEERYGLVFFRQQEDQEKALGVSKGKLFFGMQIEVTAWNGPETE
SENEFRPLDGRIDEFHPKATRTLFIGNLEKTTNYQQLLDVFQRFGEIVDIDIKRVNGVPQ
YAFVQYSDIASVCKAIKKMDGEYLGSNRLKLGFGKSMPTACVWLDGLTSNITEQYLTRHF
CRYGPVVKAVFDRLKGMALILYNNADFAQAAVRETKGWKIGGNKIKVDFASQESQMAFYR
SMQASGQDIRDFYEIPTERRDDRRASYHDFAAERAYYENVRTPGIYTEDPRRDYSGRSRD
RYAELDHYQGDHYDPRYNEDPREYRDYRDPFEDIRKYSYIQRERERERERFEADRSRWSP
SQPRRTISPSASPSPSDRVSRDAERQVYRHSSERSGSCSSLSPPPPPPPPPSQFEKTEKS
PVDFKVEEPERELEQTEAERVSATENRKRGRRKEKADREKGEKAKQRRGKVQSPSASHSE
ADREACPDLSGKLKVSDVEREERPKHKGDNELSPTDNVARVELQKGERLDQGKSESLDRD
GKGKTKKHFKAESGSDGKDSLFDSNRLEARKRRFGDPSGKAVRHKKGRLDEDPGSSDFGP
NPGFTKESDADVKTEKEAQKREHSKVKMTSHYSHREELDSSLRGTSQGPLVHPGESSEME
PIDSRSHPGQSLSRRTSTDVTSEKDQKARDEYLDNIDLSQSYRKQMEQNRRLRQQLQEPD
KPGKPETLGLDAEDLEHRSLVHEVGKPPEDVTDNSSPIKSKKQEVFELDMSAKRERIYRT
FRQKSEDPEWHNTNSPRFQHAPQQREEEYMDAHSQLIAKEPSRPDDNIQPDPELPDKPMH
APQMSKISTSQQDEQQRRWETRLKQDLLPDFSRSLEKRSLNPKFLDYGLWPDLEPGEVRS
DSEEDRENKPNSPLPSTSVSFTGRHRTDRLTESKPTFPLERNKFRSFADDQAITPDTKAL
LERAKSLSSSREDNWSFLDCDSHFASLRSRKDTEKVEAAPRPTPSWYLKKKKIRSESDDK
LDERKVDPKPEEQERRELFASRFLHSSIFEQDSRRLQHLERKHEEPEQHGVGCLYSQQGS
AEGQPEPEPVVLFHSRFLEFTRLQQQKTKEQSHQVFKQGESTDETKLDKIEEEELEAQQP
NATEANVIHQTEVKSIGSVHAPETSPVQAPLASPHLVAPRESLATVEMEISDVASHILPE
PTVKEEPQEPEEPSAQPPHPLIEQNVDLNSSDCLEAKTPVEEMKSSPKTNEVDCGHEEVT
EQLTNDDEQPKIELSLKSPEPLNSSPLQVLAEEPETELVQSVVEAEPNSADEQKGTEHCA
VEEAVSPPPKSRTKKAKTSPTVPAAAAILPATPDKQSTRKSERIDKEKLKRSSSPRGEVS
KAMPDSKSLNKSPVHSLDLEQGTEQTSLPVRARRRNVRSVYATPIEDESAPQSVKDAESP
RVARKRGADKDAGSDAAESLVAPTTSKRGRPPKNRRHAEDALVGKVERSKSTETKEFDST
DEVVSKVCKGRHSPHTQKGLSPVNVSLASGLEKMSESSKLITEESSLFLKNLRIQLDVTE
VKAMLQTSEDEPGRIDDSVKKSSPGVSFKDQLQETTFGSDVIDEDVKSEKVASPVLSKTT
EPQGPLLSRELELEQAVENIAKLTEDSSPLPFKSTPAKAQRQVGGLAEEPQRDLEEKPAN
PSSETELAAAIDSITSETTPCSVPQEQIIRSVVDSDPDVRTPGPNLKIADPRVKTAGVQE
EPTATTPKKGSKGRAKASKRPKGQKAAGSKKEPIKDAVLDAESTSVKSPEVIPAELPTLT
ERSPTSTTVVITSSSKPSASLTAPNSDPVVPESDIPKSSLAISRSPSSSRNQPYSYDSSS
PSLSPTRICLGKNLSPHPSRLSVSPSDRCIPPKEAAVLSPPLTSVAPMESPTLPTDTSVH
DAHPGDVRKILSKPRAVPLPEIPSSGNSHAPPVREIEMTPDVITNKSAAQDNRQASVTAP
PVVRQPASIPSPETKQIFSEKSVISVIASTPTSVISRVCNPSDSEEKPNAPIGNPFLDKQ
PPKQIYQPSLAESSTYHGPAVGEEGGNAGRYIVESTSLSTGSSAGLRVQTSEGVVVLSHS
GQKMEGPQRISAKISQIPPASAVDIESQQLGSMPQIKQDLYSASQPPASKSLPSDHGHSI
KPQLNLSIKQDSALDKLESPYTPVQSGVVKRLQQTAGPSQVMGYHHAEYPMVMKHPKKGD
ESLSVDERVTPAWVPTISPALTPHLPSAAGNHVGFMSGTPTDRAPSLIQSKQEPRSPRKS
GHPHSPFAKVSSPIGSSSPKGVSMVHPSGMPSLPQYVHHSEQSVIMPPHNAHGSIGRMSP
HRVGPIGHLTQGEVRVNTPPLSMMNYGIHSESLGSSWPPGQQRPTSPQAVGNREMVLKVN
PANARSLDGGEDEARRFHPTLGRPPAAQLKAESIPAEYRGALHSGLPLDRFNIAPRDMRV
LMHHQQSDRPAAELHQGHMPPENQPASSTPTSMAASLSPRPQMLSKGVSEKDAAKISELK
RAASPSAKEGMMAIRGAMPPIASPQRVQLMAAGGGASFNEYSPVYKNLRPAHSQFPDSSS
LGISVPPSQGVQEPETNQSQAEAKVEPGGHQPVNMVQLLNKYPIVWQGLLALKNDTAAVQ
LHFLCGNKALGLRSLPVPESGGILRIVQRMRLEAQQLEGVTRRMTGETDFCLLLAMPCGL
NQEDVLNQTQALKSAFINYLQAKLAAGIINVPNPGSNQPAYVLQIFPPCEFSEGHLSRLA
PDLLSQISSISPHLMIVITSV
NT seq
9426 nt
NT seq
+upstream
nt +downstream
nt
atggttcgggaaaccagacacctctgggtgggaaatttacccgaacatgttcgcgaggag
aagatcgtggagcattttaaacgctatggccgtgtggagagcgtcaaggttttgcggaag
cgcggttcggagggtggcgtcgcagcattcgtggattttgtggacataaaaagcgctcaa
aaggcccataatgcagtcaacaaaatgggggacagggacctccgcactgattacaatgaa
ccgggttcagtgcccagcgccgtgcggggtctggaagacagctccccgtctagcagccac
ggacgggaggttgcggggttctcgaggggctccgtggggccggtgtacgggcccccggtg
tccctccacaccagagaggggcgctatgaacgcagactagacggcagctctgacagtcgg
gagcgagcgtacgaacacagtccttacggacatcatgaacgtggcggcagtttcgacagg
ccgcggcattacaacacagactattatcgggaccgttctatgtttgcctctgcagtcagt
tctagccctggtgctagttctattagcggtggctttgacaccccagagtctcactttgag
tcgcgaattcgtgattcctttacactttccagctctgcacgccgtgacccttatcgtgaa
gaccggggccggcgtgcagatcggacgtaccatcaccggcggagtcgatcctcacactct
tcccagtctcgacacccgtcgccccagaggagcacagggcagaaccctaaagcacctccc
tcacctaaaagaacccctgtttcacctggccgaggcccgcggtcacgttcacgcagtcag
tcttcgagctctgattctgtcagcagcaccagcagcactggaagtggaagcagtgattcc
aacagcagctccagtgaagggtctcgagcacgctctgtgcagtctgcagcgactcatgca
cctccgccgcctcctacactcgctttagatcccgatgagccacggagaagttttggtatc
agagtccagaaccttcccacacgatccacagacacaagcttgaaagatgggcttttccac
gagtttaagaaatatgggaaagtgacatcagtgcagattcacggcgcattggaggagcgc
tacggcttagtcttcttcagacagcaggaggaccaggagaaagctctcggcgtttctaaa
ggaaaacttttcttcgggatgcagatcgaggtcaccgcctggaacggccctgaaacagaa
agtgaaaatgagtttcggcccctggatggacgcatcgatgaatttcatccaaaggccacc
cgtacgttgtttataggaaatctagagaagactacaaattatcagcagttacttgatgta
ttccagcgttttggagagatagtggacattgatatcaagagggtcaatggtgttccccag
tatgcatttgttcagtactctgatattgcaagtgtttgtaaagccatcaagaaaatggac
ggagagtatctcggatcaaacagactgaagcttggcttcgggaagagtatgccaacagct
tgcgtgtggttagatggattaacctccaatattacagaacagtacctcacacgacacttc
tgtcgttacggacctgttgtcaaggctgtgtttgataggttaaaaggaatggctcttatt
ctgtacaacaacgcagattttgctcaagcggctgtcagagaaaccaaaggatggaagatt
ggagggaacaaaattaaggtggattttgccagtcaggagagtcagatggctttctatcgt
tctatgcaggcatcaggacaggacatccgcgacttctatgaaattcctacagagaggaga
gatgaccggagagcttcatatcatgactttgcagcagaaagggcatattatgagaatgtg
cggacccctggcatttatactgaagaccctcgacgagactactctggtcgcagccgtgat
cgctatgcagagctggaccattaccagggagaccattatgatcctcggtacaacgaggac
ccacgtgaatacagagattatcgagacccatttgaggatatcaggaagtacagctacatc
cagcgagaacgggagcgggagcgtgaacgctttgaggcagatcgaagcagatggagccca
tcacagccacgccgcaccataagtccctctgcttcaccctcaccatctgatcgtgtgtca
cgggacgctgaaagacaagtgtacaggcactcttctgaaagatctggaagctgcagctct
ttatctccacctcctccaccaccaccaccaccatctcagtttgaaaagacagaaaagtcc
ccagtagatttcaaagtggaagagccggagcgggaactggagcagactgaggcagagcgt
gtgagtgcgactgaaaacaggaagcgtggcagacgcaaggaaaaggctgacagggagaaa
ggagagaaagccaaacaaaggagaggaaaagttcaatcgcccagcgcatctcattcagaa
gctgatagagaggcttgtccagatttaagtggaaaattaaaagtttcagatgtggagaga
gaagaaagaccaaagcataaaggagacaacgagctctcccccactgacaatgtggctcgt
gttgaactgcaaaagggagaacgacttgatcaagggaaaagtgagtcattggatcgcgac
ggcaaaggaaagacaaagaaacacttcaaagctgaatctggtagcgatggcaaagattcc
cttttcgattctaacagacttgaagcaagaaagagacgctttggtgatcccagtgggaaa
gctgtaaggcacaaaaaaggacgcttggacgaggatccaggttcttcagactttggtcct
aacccagggttcacaaaagagtctgatgctgatgtaaaaacagagaaagaggctcagaaa
agagaacactccaaagtcaagatgacgtctcattatagtcacagggaagagcttgatagc
agtctgagaggaacgtctcagggcccattagtacacccaggtgaatcctctgagatggaa
cctatagactccagatctcaccctggacaaagtctgtctaggcggacttcaactgacgta
acctcagaaaaagatcaaaaagcaagggacgagtatctagataatattgacttgtctcag
agttatcgcaaacagatggagcagaataggcggctacggcaacagctgcaggagcctgat
aaaccgggaaaaccagaaactctgggattagatgcagaagaccttgaacatcgtagcctg
gtgcatgaagtaggtaaacctccagaagatgttactgataattcttccccgattaagagc
aagaagcaagaggtatttgaactagatatgagtgctaagagggaacggatttaccgaacg
ttcaggcaaaagagcgaagacccagaatggcataacacaaactctccacgatttcagcat
gcccctcaacaaagagaagaagaatatatggacgctcatagtcaattgatagctaaagag
ccatctagacctgatgataatattcagccagatccagagcttccagataaacccatgcat
gcaccacaaatgtcaaagataagcacatctcaacaagatgagcaacaaagacgctgggag
actcgactaaagcaagacttgttgccagacttttctagaagcttagagaaaagaagtctc
aatccaaaattcttggattatggactttggcctgatttagaacctggagaagtccgctca
gactctgaagaggatcgtgaaaataaaccaaactctcctttgccctcgacttctgtatcc
ttcacaggaagacatcgtacagacagactgacagagtcaaagccaacattccctcttgag
agaaacaagttccgctcattcgcagatgatcaagctatcacaccagatactaaagctttg
ttagaacgtgcaaagtctttgtcttcctcaagagaagataactggtctttcctcgattgc
gactcgcactttgccagtttaagaagccgaaaggacaccgaaaaagtagaggcggcacca
cggcccacaccctcttggtatttgaagaaaaagaagattcgaagcgagtctgatgacaaa
ttggatgagagaaaagtagatccaaagccagaagaacaagagcgacgtgagctgtttgca
tcacgctttcttcacagttctatttttgagcaagattcaagacgcctccagcatttggaa
agaaagcacgaggagcctgaacaacacggtgttggatgtttgtactctcaacaaggctct
gctgaagggcagccagagccggaaccagttgtgctttttcacagccgctttttagagttt
acaaggttgcagcaacagaagacaaaagaacaatcccatcaagttttcaagcaaggcgaa
agcacagatgagaccaaattagataaaatagaagaggaagagctagaagcacagcaaccg
aatgccactgaagctaatgttatccatcaaacggaggtcaaatcgattggttccgttcat
gcaccagagactagtccagttcaggcccctctagcatccccacatcttgtagcacctaga
gaatctttggcaacagtagaaatggaaatatctgatgttgcatcccatattttgcctgag
cctactgtgaaagaggaacctcaagagcctgaagaaccctcagctcagccaccacaccct
ttgattgagcaaaatgttgacttaaattcctcagattgcctagaggcgaaaactccagtt
gaggagatgaaatcatcacctaagactaatgaagtggactgtgggcatgaagaagttaca
gaacagctcacaaatgatgatgaacaaccaaaaattgagctgtcattgaaatcacctgaa
ccacttaactcctctcccctgcaagtccttgctgaagaacctgaaacagaacttgtgcag
tctgttgtagaagctgaacctaacagtgcagatgaacagaaaggaactgaacactgtgct
gttgaagaagccgtttcgcctcctccaaagtcaagaactaaaaaggctaaaacctcaccc
actgtaccagcagcagctgccatcctgcctgctactccagacaaacaaagcacccgcaaa
agtgaacgtatagacaaagaaaaactgaaacgctcatcttctcccagaggtgaggtatct
aaggcaatgcctgattcaaagtcactcaacaaatctccagtgcacagcttggatctggag
caaggtacagagcaaacatcactgccagttagggcaaggcgtaggaacgtacgttctgtc
tatgctacaccaattgaagatgaatctgctcctcaatctgtaaaagatgcagaatctcct
cgtgttgcaaggaaacgtggcgcagacaaagatgctggatcagatgcagcggagagcctt
gttgccccaacaacttccaaacggggtcgtcccccaaagaataggcggcatgcagaggat
gcgctggtgggaaaagtagaacggtcaaaatcaactgagaccaaggaatttgatagcact
gatgaggtagtttccaaagtgtgtaaaggcagacattcaccccatacacagaagggacta
agtccagtgaatgtgtcactggcatctggattggaaaaaatgtcagaaagttctaaactc
attactgaagaaagctcgctttttcttaaaaaccttcgaatccagcttgatgtgaccgag
gtgaaggcaatgcttcaaaccagtgaagatgaaccagggagaattgatgattctgtcaaa
aagagttcacctggtgtttccttcaaagaccagttacaagaaactacatttggaagtgat
gtgatagacgaggatgttaaaagtgaaaaggtggcttcgccagttctgtcgaaaactact
gagccacaaggacctttactgtctcgagagctggagctggagcaagctgttgagaatatt
gccaagctgacagaagattcttctcctcttccgtttaaaagtacccccgcgaaggcacaa
cgtcaagtaggtggacttgctgaagaaccacagcgtgacttggaagaaaagcctgctaat
ccgtccagtgagactgagctagccgctgctattgattccattacatcagagaccacgcct
tgcagtgtaccacaggaacaaatcattagatctgttgtagattcagatcctgacgtccga
acaccagggcctaatctgaaaattgcagacccccgtgtcaaaacagctggtgttcaggag
gagcccaccgcaactactcccaaaaagggcagcaagggcagagctaaagcctcgaagaga
cccaaaggtcagaaggcagctggaagcaaaaaggaacctatcaaagatgcagttttggat
gctgagagcacctctgtgaagtcacctgaggtcatacctgcagaacttccaacattaaca
gagagatcgcccacgagcaccactgttgtcattacttcctcttccaagccaagtgcgagt
ttaacagctcctaattcagatcccgtggtgccagagtctgatattccaaaatcctctcta
gccatcagcagaagtccctcttcatccagaaatcagccttattcatatgacagctcatca
ccttcattatctccaacaagaatctgtctcggcaaaaacttgtcaccacatccaagtagg
ctgtccgtgtccccatcagaccgttgtattccaccaaaagaagcagcggtcctctctcct
ccactgacctctgtagcacctatggagagcccaacattacccacagacacgtctgttcac
gatgctcacccaggtgatgtgcgcaaaatcctatccaaacccagggctgttccattgcca
gaaattccatcatctgggaacagtcatgctcctcctgtgagagaaattgagatgacacca
gatgtgataaccaacaagagtgctgctcaagataacaggcaagcatcagttactgcccca
cctgtagtcagacagcctgcttctatcccatctccagaaacaaagcagatcttcagtgag
aagtcagtaatttcagttattgcttccactcccacctctgtaatcagtagagtttgcaat
ccttcagactctgaagagaagccaaatgctccaataggaaatccctttctggacaaacaa
cctccaaaacagatttaccagccgagcttagcagaaagcagcacttatcatggaccggca
gttggagaggaaggtggaaatgctggtcgttatattgttgagagtacgtctctgagtaca
ggctctagtgcaggacttcgagttcagacgtcagaaggagtggtggtgttgagtcattct
ggccaaaaaatggagggcccacagcgtataagtgccaaaatcagtcagatcccaccagct
agtgctgttgatatagagtcacagcaactgggatccatgccacagatcaagcaggacctc
tacagtgcctcccagccaccggcttccaaatcccttccctctgatcatggccattctata
aaaccacagctgaacctttctatcaagcaagactctgctctggacaaactagaatcccct
tacacgccagtccaaagtggggttgttaaaagattgcaacaaaccgctggtccatcgcag
gtcatgggctaccatcacgcagaataccccatggtgatgaagcatcccaagaaaggagat
gagtccctaagcgtggacgagcgtgtcacaccagcctgggtcccaactataagccctgct
ttaaccccacatcttccttcagctgcaggaaatcatgttgggttcatgtctggcacgccc
acagaccgagctccgtcactcattcagtcgaaacaagagccgcgatccccacgcaaatcc
ggacaccctcattctccgttcgccaaggtatcgtcccctattggctcttcgtctcccaaa
ggtgtgtctatggtccatccgtctggaatgccctctctgccccagtatgtccatcattcg
gagcaatctgtcatcatgcctccacacaatgctcatggcagcatcggcagaatgtcgccg
caccgcgtcggcccgataggacaccttactcagggcgaggtacgagtgaacacgcctcct
ctctctatgatgaactatgggattcactctgagagcctcggttcttcctggcctcctggc
cagcagcgtcccacttcccctcaggccgttgggaacagggaaatggtgctcaaggttaac
ccagcaaatgcgaggagtcttgatggaggggaggacgaggccagacgtttccatcccact
ctcgggagaccgcccgccgcacagctgaaagcagaatccataccagcagaataccgcgga
gcccttcacagcggccttccgctcgatcgcttcaacattgctccaagagacatgcgagtg
ctcatgcaccaccagcagagcgatcgtccagctgcagagttacaccagggtcacatgccc
cctgagaaccaaccagcttcttcaactcccaccagcatggcagcatctctttctccccgg
ccgcagatgttatcaaagggagtgtctgagaaggacgcagcaaaaatatccgaactgaag
agggcggcgtcaccgtctgctaaagaaggaatgatggccatccgtggcgcgatgcctccc
atagcctctcctcagagggtccagctgatggcagcaggaggcggggcgtcgtttaatgaa
tattcccctgtgtataagaacctacggcccgcccattctcaattccctgacagttcttca
ctgggaatcagcgtcccaccatcgcagggtgttcaagagccagagacaaaccaatcacag
gctgaagctaaagtagagccaggtggacatcagcctgtgaacatggtgcagcttcttaat
aagtaccccatcgtgtggcaaggcctgctggcgcttaagaatgacacggcagctgttcaa
ctgcactttctctgtggaaacaaagctctcggcctgaggtctttgcctgttccagaaagt
ggtgggattctgcgcattgtgcagaggatgcgactggaggcgcagcagttagagggagtc
acgcgcagaatgactggtgaaactgatttctgcctgctgttggcgatgccctgtggtctc
aatcaggaagacgtgttgaaccagacacaagcactcaaatccgccttcatcaattacctg
caggccaaactggcggcgggcatcatcaacgtccccaatcctggctccaatcagcctgcc
tacgttttgcagatatttccaccgtgcgagttttctgagggtcacctttcacggcttgcg
ccggatcttctcagccaaatctccagcatctctccacacctcatgattgtcatcacatct
gtttga
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integrated database retrieval system
