Triplophysa dalaica: 130431686
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Entry
130431686 CDS
T09616
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
tdw
Triplophysa dalaica
Pathway
tdw04060
Cytokine-cytokine receptor interaction
tdw04672
Intestinal immune network for IgA production
tdw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130431686 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130431686 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
130431686 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tdw04052
]
130431686 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
tdw00536
]
130431686 (cxcl12a)
Cytokines and neuropeptides [BR:
tdw04052
]
Cytokines
Chemokines
130431686 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
tdw00536
]
Heparan sulfate / Heparin
Chemokines
130431686 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
130431686
NCBI-ProteinID:
XP_056616824
LinkDB
All DBs
Position
11:complement(8334989..8342104)
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AA seq
98 aa
AA seq
DB search
MDMKVIVVCALMAVFIHAPISNAKPISLVERCWCRSTVNTVPQRSIRELKFLHTPNCPFQ
VIAKLKNNKEVCINPETKWLQQYLKNALNKMKKSQQQR
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaaagtaatcgtagtttgcgctctgatggcggtcttcattcatgcccccatt
tcaaatgccaagcctatcagcctggtggagagatgctggtgccgttctacagtcaacaca
gtccctcagaggagcattcgggagctcaagttcctgcacacaccaaactgccccttccaa
gtcattgcaaaactgaagaacaacaaggaggtgtgcatcaacccagagaccaaatggctt
cagcagtaccttaagaacgccctgaacaaaatgaaaaaatcccaacaacagagataa
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