Triplophysa dalaica: 130432211
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Entry
130432211 CDS
T09616
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
tdw
Triplophysa dalaica
Pathway
tdw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130432211 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130432211 (c9orf72)
Membrane trafficking [BR:
tdw04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
130432211 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Zn_ribbon_LysW
Motif
Other DBs
NCBI-GeneID:
130432211
NCBI-ProteinID:
XP_056617475
LinkDB
All DBs
Position
11:14236115..14242243
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AA seq
462 aa
AA seq
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MSAACPPQSPAVAKTEVLVDDWCPMLAATFAYWDNILGPRVRHIWAPRGQGFSLLCDGEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQS
ELSFYLPLHSVCVERLKHIIRKGRICMQKGYNIISVLSSEIVPIMELLTSMKKHSVPEEV
DIKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSMVVGSNPEKVNKIVLTLCLFLTPAE
RKCSRLCHPDGLFKYDTGLFVQGLLKDSTGSFVLPYRQVLYSPYPTTHIDVDINTVKQMP
PCHEHMYHQRRYMRSELSALWRAASEDDISPDNLINAQDSFTPDLNIFQDVMHRDTLVKS
FIDEVFLLKPGLSLRSVYLSHFLLLLNRKALTLLRYIEDETQKGKKTFRSLRNLKTDLDL
TVEGDLNIILAMAEKLRAGLHSFVFGKSFLTSMQERDLLMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagcctgtcctccgcaatctcccgctgtggctaagactgaggtgctggttgat
gattggtgtcccatgctggccgccaccttcgcctactgggacaacatcctgggaccccgc
gtacggcacatctgggcccccagaggtcagggattttcgctgctttgtgacggagaggtc
acgtttttagccaatcacactctcaacggggagattttgcgaagcgccgagtgcggtgcg
gtggacgtgaagtttttcgttctggcagaaaagggagtcatcatcgtctcgctcatcttt
gatggagaactcaaaggggataagaacacttgtgctctgtcgatcattttaccgcagtca
gagctaagcttctatctgcctcttcacagtgtgtgtgtggaaagactcaaacacatcatc
cgcaagggacgcatctgcatgcaaaagggttacaacatcatctctgtgttgtcatctgag
atcgttcccataatggagcttctcacctccatgaagaaacacagtgtacctgaggaggtg
gatataaaggacactgtgctcaatgatgatgatatcggggacagctgtcacgaagacttt
ttgcacaaggctatcagctctcatcttcagacctgcggctgttccatggtggttggcagc
aatcctgagaaagtcaacaagattgtgctcacgctgtgtttgttcctcacccctgccgag
agaaagtgttctcgactgtgtcatccggacggcttgtttaaatacgacactggcctgttt
gttcagggtctcctcaaggactccacagggagttttgtgttgccataccgccaggtgctc
tactccccctaccccaccacccacatcgatgtggacattaacacggtgaagcagatgccc
ccctgccacgagcacatgtaccatcagcgacgctacatgcgctcagagctcagtgcactc
tggagggccgccagcgaggatgacatcagtccagacaacctcatcaacgcccaggactcc
tttaccccagacctgaatatatttcaggacgtgatgcatagagatactctcgtgaagtcg
ttcatagatgaggtgttcctgttaaaaccaggtctgtctctacggagtgtgtacttgtcc
cacttccttcttctgctaaacaggaaggccctgacactgctcagatatattgaggatgag
acgcagaaggggaagaaaactttcagatctctacgcaatctgaaaactgatttggactta
accgtggagggcgatttaaacatcatcttggcaatggcggagaagctacgggcaggtctt
cactcgtttgtttttgggaagtctttcctgaccagcatgcaagagcgtgacctcctcatg
agcttctga
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