Triplophysa dalaica: 130436775
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Entry
130436775 CDS
T09616
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130436775 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tdw04990
]
130436775 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
tdw04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
130436775 (ltbp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_MSP1_1
EGF_TEN
EGF_Teneurin
EGF_2
DUF7506
Motif
Other DBs
NCBI-GeneID:
130436775
NCBI-ProteinID:
XP_056623702
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All DBs
Position
15:6533817..6593995
Genome browser
AA seq
1622 aa
AA seq
DB search
MDMAVLIWDIILALLISPALLSADQSGVRRLYVFQPGPSRTDRVHVSSISSFSGASGQPH
SYNVQLKANFGGQVRTRRTGHQSIPSIPIRQDTQPVRHTTSHHMKVSGVNVCGGQCCVGW
SKTPGSQRCTKPNCSPQCKNGGMCLRPHMCVCKPGSKGKSCEQTTLSPSSHPTGPLNGHT
KGGLPNGSHKNGYSNGHNVIPQRPIPQQRFPQGQGQVPLPLPGTSVGHMTLPMKPPNGPI
PYQPQGQNPVSMTMHQSKSQKFTIQQKNYHTHTQMHGVGPTLNRAIPLSVGHNPLHVGNH
TGRIKVIFTPTICKMTCINGRCQNSCEPGNTTTIISENGHATDTLTAPNFRVVVCHLPCM
NGGKCSARDKCQCPPNFTGKFCQMSNPNGHHGQQTVANGQKTQVHSTHTLPLTYGTGQNQ
GLVNVHVKHPPEASVQIHQVSPVDSNSQVKNSQSSHSFTYHISESSSSQSIQHGHSGAIY
PNQQTYLQYQPVTSKSQLGRCFQETTGMQCGKALPGLSKQDACCGTVGTSWGFHKCQKCP
KKTSIPLQRPTTMIECPPGYKRVNATRCVDVDECQIPGVCPNGQCINNMGSYKCFCNPGF
MPDPTLSTCIPETPAQHEEKGACFRLVGSRKQCLHPVSTQLSKQLCCCSVGKAWGPRCDH
CPLPGTAAFKEICPGGMGYHVTTPYIYKPKLPAGHVQTGGQGQGNPVIRHQAPVDPPMPF
PTLQQPIEALSITERQLPEVREKVSPPAPVEILPSHASQEIAPTQLAEVDECHINPDICG
PGFCINKPDSYICICDIGFRTDSEGTTCLDVDECAESQGVCANGHCQNTRGSFKCACEPG
FMSNEDGSSCSDIDECRDSQVCPSGICHNSLGSFRCIQCPDGFERRNGQCADINECLDES
VCAHGTCTNLEGYFVCTCDKGFTLTYDGKACTDIDECQDDSVCTQGHCQNTEGSFICNCE
PGFVLSSTGDQCDDVDECLALRQTCDGVGQCVNILGSYQCNCPQGYRQVNGTSCQDVDEC
QDDTQPCGPNGECLNIDGSFFCDCDAGFMSTRDQTGCEDVDECLDGSRCVNGTCLNTMGS
YFCQCEGGYRLDPTNQTCQDIDECAELGASICGVWDCQNTPGSYRCVASCPPGHSRGDFG
TCIDMDECTLNENTCGSHGVCQNTMGSFSCQCDPGFKDSQDGQGCVDVNECELLSDVCGE
ATCENQEGSFLCLCPDETQEFNTMTGKCLSSTPAPSVERKECYYRLNDENLCDNVLASSM
TKEECCCTIGAGWGDNCEVHPCPIPGTDQFSQMCPAGQGYVPTESVIPGASVADSFKDAD
ECVVFEKEICKDGFCINTPGGFECYCKSGLYYDENKLQCVDIDECEDESKCINGQCMNSY
GSYQCFCTPPFVLGPNNTHCISQPVAGQREAEVYEGVCWETVETQLTCTKPVADRETTFT
ECCCLYGEAWGMECALCPGKNTASYASMCNIRRPYGQDALVAGPIYEYEVSPEYDPRPLN
PDGTLPFYEDYDTARRPYDGFEGLRAEECGVLNGCENGRCVRVQEGYTCDCFDGYTLDMS
RMACVDINECSELNSKMSLCKNGKCINTQGSYKCVCLPGFVHSAQLNYCVAQIQNTTSSS
RE
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggatatggctgtactcatatgggacataatcttggcgttattgatctctccggctttg
ctttcggcggatcagagcggtgttaggagactctacgtgtttcaaccggggccgagccgg
accgatcgagttcacgtgagctccatttcatcgttctctggagcgtctggacaaccgcac
tcgtacaatgtacaactcaaagccaacttcggcggacaggtccggaccagaagaacgggt
caccagtcgatcccgagcattcccatccgtcaggacacgcagcccgtccggcacacaacc
agccatcatatgaaagtttcaggagtgaacgtctgtggggggcagtgctgtgtcggttgg
agcaagacacccggatctcagcgctgtaccaaacctaattgctcgccccagtgtaaaaat
ggaggaatgtgcttgcggccccacatgtgtgtgtgtaagccaggatctaaaggaaagtcc
tgcgaacagaccactctctccccatcctctcatccaaccggaccactgaacggacacaca
aaaggtggacttccaaacggcagtcataaaaatggatacagcaacggtcataatgtcatt
ccccagcgacccattcctcagcagagattcccacagggccaaggtcaagtgccattacca
ttgcccggcaccagcgtgggacatatgacgttgcccatgaagccacctaatggacccatc
ccttaccaaccacaagggcaaaatccagtttccatgacaatgcatcagagcaaaagccag
aaattcacgattcagcagaaaaactaccacactcacacgcagatgcatggagtcggaccc
actctcaaccgggccatcccactttcagtggggcacaatccacttcatgttgggaaccac
accggccggatcaaagtgatcttcactccaactatctgcaagatgacctgcattaacggc
cgctgtcagaacagctgcgagccgggcaacaccaccaccatcatcagcgagaacggacac
gccaccgacacgctcaccgcccccaacttcagagtcgttgtttgccatttgccctgcatg
aacggaggaaaatgcagcgctcgggacaagtgccagtgccctcccaactttaccggaaaa
ttctgccaaatgtcgaatccaaatggtcatcatgggcaacagacggtggcaaacggtcag
aagacacaagtgcactcaacacacacgcttcccctgacctatggcactggacaaaaccaa
ggtttggtgaatgtccacgtgaaacatcccccagaggcctcagtccagatccaccaggtg
tctcctgtggacagtaacagtcaggtgaagaactcgcagtccagccactccttcacctac
cacatctctgagtctagcagcagtcagagcatccaacatggacacagcggagccatttat
cctaaccaacaaacatacctccagtaccagccggtgacatctaagagccagctgggacgc
tgcttccaggagaccaccgggatgcagtgtgggaaagctctgcctggactctctaaacag
gacgcctgctgtgggacggtgggcacatcgtggggattccacaaatgccagaaatgcccc
aaaaaaacatcaattcctctgcagaggccaaccaccatgattgaatgtccaccgggctat
aagagggtgaatgccactcggtgtgtcgatgttgatgaatgtcagatcccgggtgtttgt
cccaatggacaatgcatcaacaacatgggcagctataagtgtttctgcaaccctggcttc
atgcctgaccccaccctctccacctgcatccccgaaacacctgctcaacacgaggagaag
ggtgcttgcttccgattggtcggttcaagaaagcagtgcttgcaccccgtgtccactcag
ctgagtaaacagttgtgctgttgtagtgtgggcaaagcttggggccctcgctgtgaccat
tgccccctacctgggacagctgcatttaaagagatttgtcctggaggaatgggttaccat
gtgaccacaccatacatttacaagcccaagctacctgctggacatgtccagacaggtggt
caggggcaaggcaatcctgtcatcagacaccaggcacctgtagatcctcccatgcccttc
cctaccctgcagcagcccatagaggctctcagcatcacagagagacagctacccgaggtg
agggagaaggtgtcgcctcctgctccagtggaaattctgccctcccatgcaagtcaggaa
atagcaccaacacaactggcagaggttgacgagtgtcatataaatcctgatatttgtggc
ccagggttctgtattaacaaacctgacagctatatatgcatctgcgacattggcttcaga
actgacagcgagggcacgacatgtttagatgttgacgagtgtgcggaaagccaaggtgtg
tgtgctaatggtcactgtcagaacacccggggcagtttcaagtgtgcatgtgagcctggc
ttcatgtctaatgaggacggcagcagctgctcggatatcgacgaatgccgggacagtcaa
gtgtgtccgtctggtatctgccataacagtctgggctcttttaggtgtattcaatgtccg
gatggatttgagagaagaaacggccagtgtgctgatataaatgaatgtctggatgaaagt
gtttgtgctcatggtacctgcaccaatctggagggatatttcgtctgcacgtgtgacaaa
ggcttcacgcttacttatgatggcaaagcctgcacagatattgacgaatgccaggatgac
agtgtgtgtacacaaggtcactgtcagaacacagaggggtcgttcatctgcaactgtgag
ccaggcttcgtactctcctccacaggagaccaatgtgacgatgtggatgagtgtttggcg
ctacgacagacgtgtgatggcgtgggccagtgtgtgaatatactgggctcataccagtgc
aactgcccacagggatatagacaagtgaatggaactagctgtcaggatgttgatgagtgt
caggacgacacacagccgtgtggcccgaatggagagtgtttgaacattgatggctcgttc
ttctgtgactgtgacgctggcttcatgtccacacgtgatcagacaggctgtgaagatgta
gatgaatgtctagatggcagcaggtgtgtaaatggtacctgtttgaacacgatgggctcg
tatttctgtcagtgtgaaggaggctaccgtttggacccgaccaatcagacatgccaggat
attgatgagtgtgctgaactgggggcatctatttgtggggtgtgggattgtcaaaacaca
ccgggctcttaccgatgtgtggcgtcctgcccccctggccattcacgaggcgattttggc
acctgcattgacatggatgagtgtactctgaatgagaatacctgcgggagtcacggtgtt
tgtcagaatacaatgggctccttcagctgccagtgtgatccggggttcaaagactctcag
gatggtcagggctgtgtggacgtgaacgagtgtgaacttctcagtgatgtgtgcggtgag
gcaacctgtgagaaccaagaaggatctttcctatgtttgtgtccggatgagactcaagaa
ttcaacactatgactggcaaatgcctctcttcaactccagcaccatcggtggagaggaag
gagtgctactacagactgaacgatgagaacctgtgtgataatgtgctggccagtagtatg
actaaagaggaatgctgctgtacaattggggccggatggggggacaactgcgaggtccat
ccctgccccataccaggaacagatcagttctctcagatgtgtccagcgggccagggttac
gttcctactgaatctgtgattccgggagctagcgtagcagacagctttaaagacgcagat
gaatgtgtggttttcgaaaaggagatttgcaaagacgggttttgtattaacacccccggt
ggatttgaatgttactgcaagtccggcctttactacgatgagaacaagctgcaatgtgtc
gacattgatgaatgtgaagatgagtctaaatgtataaatggtcaatgtatgaactcatat
ggctcatatcagtgtttctgcactcctccatttgttcttgggcctaacaacactcactgc
atttcacaaccagtggcaggacaaagagaagctgaagtgtatgagggtgtttgctgggag
acagtggaaacacaactaacctgcaccaagcctgtcgccgacagagaaaccacattcacg
gagtgctgctgtttatacggcgaggcctggggaatggagtgtgctctctgccctggcaaa
aatacagcttcctatgcctcaatgtgtaatatccgtcggccgtatggtcaggacgctctg
gtcgctggcccaatttatgagtatgaggtcagccctgaatatgaccctcgacctttgaac
cctgacggtacactgcccttctatgaagattatgacacagccagacgaccatatgatgga
tttgaaggattgcgagcggaggaatgtggcgtgctaaatggatgtgagaacggccggtgt
gtgcgggtacaggagggatacacctgcgactgctttgatggatacacgctcgacatgtcc
cgcatggcctgcgtggatattaacgaatgctcagagctgaattcaaagatgtccctctgc
aagaacggcaagtgcatcaacacgcaaggctcatacaagtgcgtctgtctgccaggattt
gtccactctgctcagctcaactactgcgtagcccaaatacagaatacaaccagctcaagc
agggagtga
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