Triplophysa dalaica: 130437873
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Entry
130437873 CDS
T09616
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw04010
MAPK signaling pathway
tdw04020
Calcium signaling pathway
tdw04510
Focal adhesion
tdw04518
Integrin signaling
tdw04519
Cadherin signaling
tdw04540
Gap junction
tdw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130437873 (pdgfrb)
04020 Calcium signaling pathway
130437873 (pdgfrb)
09133 Signaling molecules and interaction
04518 Integrin signaling
130437873 (pdgfrb)
04519 Cadherin signaling
130437873 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130437873 (pdgfrb)
04540 Gap junction
130437873 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130437873 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tdw01001
]
130437873 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tdw04090
]
130437873 (pdgfrb)
Enzymes [BR:
tdw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
130437873 (pdgfrb)
Protein kinases [BR:
tdw01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
130437873 (pdgfrb)
CD molecules [BR:
tdw04090
]
Proteins
130437873 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
V-set
Ig_VEGFR-1-like_5th
PKD
Ig_MYOM1
RIFIN
Motif
Other DBs
NCBI-GeneID:
130437873
NCBI-ProteinID:
XP_056625495
LinkDB
All DBs
Position
16:complement(142412..167173)
Genome browser
AA seq
1061 aa
AA seq
DB search
MTSFTLRLFQLTAMTIGVILLCSALEINPNVPEVILSTSSSLNITCSGWANVTWRFKREE
NVPLFHIKNQSPTSSVLSLQNVTWRHTGVYVCSENGTNDTRELTVFVPDPEVWFLDNDYV
MVTKTRKEGTIPCLVTDPQTNVTLLEKDSEMAVEGSYNPTVGYTAALEDRTYKCRGEQGG
QEKDSIIFYVFTVMTPEVLEPFINASRTVLKQGETLNVNCTVHDVELVFFSWDFPNKDVG
NIEPLTDVLSSLSMRSCLNITNVTLSSSGEYVCHAKEGIQNLRASANITITVLENGFVDL
RSHLDRNMSAQLDENVELKVEIDAYPKPSVHWTKDGGVIHGENTRQTHETRFISTLTLVR
IRLEQMGLYTVSVQNEDDFKNMTFDLEVKVPPQITQLSDHPLSGRRLAVICVADAVPSPS
IQWFSCDSMHKCSNRSAVWSPLVEDPESITIQTNITYNSTRKIHQTHSQVTFLRPQLLTI
RCEARNERGARARDIRLVNSTLFSQVAVLAAVLALVVIAIISIIILIAVWRKKPRYEIRW
KVIESVSLDGHEYIYVDPIHLPYDLTWEMPRDSLLLGRTLGSGAFGRVVEATAYGLGSSQ
TSTKVAVKMLKSTARKSETQALMSELKIMSHLGPHLNIVNLLGACTKQGPLYLVTEYCRY
GDLVDFLHRNKHSFLQYHTDKNHIANGNSGLLCSDADTATGKEYVSFASECDGGYMDMNK
DEEQTEYVPMQELTDTIKYADIQPSPYESPYQQDIYQEQGHRVDSSLIISDSTGMSYIDL
VGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDNNYISKGNT
FLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPELPMNELFYSALKRGYRM
TKPTYASDDIYEIMKNCWDEKFEKRPEFSFLVHSMGNLLSDGYKKKYSQVSDSFLKSDHP
AVVRVKPRVSSSFSGTVSPSGLPPGLLPDPTPRPQSDPHNEYIIPLPDPKLENDTEDVMG
PLESPLSSMSFDEETVSMETPSTEPELEHHSGTPDVEESFL
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtttcaccctccgtctgttccagctgactgccatgactataggtgtgattctg
ctctgttcggctcttgaaatcaatcccaacgttccagaggtcattctctccacatcatct
tctctcaacatcacctgctccggctgggcaaacgtcacctggcgcttcaaacgagaagag
aacgttcctctgttccacattaagaaccaaagtcccacttccagcgttctgagtctgcag
aatgtgacatggagacacacgggcgtgtatgtgtgttctgagaacggcaccaatgacaca
cgagagctgaccgtttttgtgcccgatcctgaggtttggttcctcgataacgattatgtg
atggtgactaagactcgtaaggagggaacgataccgtgcctggtcacagatccacagaca
aatgtcacactgttagagaaagacagcgagatggcagtggagggctcatacaaccccacc
gtgggctacaccgccgccctggaggacagaacctataaatgcagaggagagcagggcggc
caggagaaagactccatcatattctacgtcttcactgtcatgactcctgaggttctggaa
cccttcatcaacgcctccagaactgttctgaaacagggtgagacgctaaacgtcaattgt
accgttcacgacgtggagctcgtcttcttctcctgggattttcccaacaaagatgttggg
aatattgagcccttgacagatgttctgtcctcgctgagcatgcgctcttgtctcaacatc
acaaacgtcactctgtccagctctggagagtatgtgtgtcatgcaaaagagggtattcag
aacctgagagcttcagctaacatcaccataactgttctggagaatgggtttgtggatctg
agatctcatctggacagaaacatgtcagcgcagctcgatgagaacgtggagctgaaagta
gagatagatgcataccccaaacccagcgtccactggactaaagacggaggtgttattcac
ggggagaacactcgacagacacacgagaccaggttcatcagcacattgaccctggtgagg
atccgactggagcagatgggtctctacactgttagtgtccagaatgaagacgactttaaa
aacatgacctttgacctcgaggtgaaagttcctcctcagataacacaactctctgatcat
ccgctgtcggggaggagacttgcggtcatctgtgtagcagacgccgtgccgtctcccagc
atccagtggttcagctgtgacagtatgcacaaatgcagtaacagaagtgcagtatggagc
cctctagtggaggatccagagagcatcaccatccagaccaacatcacctacaacagcaca
cgcaagatccatcagactcacagtcaggtgactttcctccggccgcagctgctcaccatc
cgctgtgaagccagaaacgagagaggagctcgagccagagacatcagactggtgaacagc
acgttgttctcacaggttgctgttcttgctgctgttctggcactggtggtcattgccatt
atctccatcatcatcctcattgctgtctggaggaagaaaccgcgctatgaaatcagatgg
aaggtcattgaatcggtcagtttggacggacacgagtacatttatgttgaccccattcac
ctgccgtatgacctgacctgggagatgccacgagacagtctgttgctgggtcgtacattg
ggttctggtgcatttggacgtgtcgtggaggccacggcgtacggcctcggcagttctcaa
acctccaccaaagtggcagtaaagatgctgaaatcgacggctcggaagagcgagactcaa
gctctgatgtctgaactgaagatcatgagtcatcttggtcctcatctgaacatcgtgaac
ctgctgggcgcctgcaccaaacaaggtccgctgtacctggtaacagaatactgtcgctat
ggtgatctggtggatttcctgcacaggaacaagcacagcttcctccagtaccacactgac
aagaaccacatcgccaacggcaacagcggcctgctctgtagtgatgctgatacagcgaca
ggaaaagaatacgtgtcgtttgccagcgagtgtgatggaggttatatggacatgaacaaa
gatgaagaacagaccgagtatgttccaatgcaagagctcacggacactatcaagtacgct
gacatccagccatcaccatacgagtccccttaccagcaggacatctatcaggagcaaggt
cacagagtggacagctctctgatcatcagtgattctacgggtatgagttacattgatctg
gtgggtttcagttatcaggtggctaaaggcatggagtttctcgcatcaaagaactgtgtt
catcgagatctggcagctagaaacgttttgatctgtgaaggcaaactagttaagatctgt
gactttgggcttgccagagacatcatgcacgacaacaactacatctccaaaggcaacacg
tttctccctctgaagtggatggcaccagagagcatctttcataacttgtacaccacgctg
agtgacgtctggtcttacggcatcttactgtgggagatcttcactctcggaggaacaccg
tatccagaactgccgatgaatgaattattttacagcgctctgaagagaggttaccgcatg
accaaacccacatacgcctcagacgacatctatgagatcatgaagaactgttgggatgag
aagtttgagaaacgtccagagttctcctttctagtgcactcaatggggaaccttctgtcg
gacggatataaaaagaaatattctcaagtcagcgatagttttttgaagagcgatcaccct
gctgtggtccgtgtgaagccgcgggtttcctcatcgttttcaggcaccgtctctccttct
gggcttcctccaggacttctgcccgacccaactcctcgtccacaaagtgacccgcacaac
gaatacatcattccccttcctgacccaaagctagagaatgacactgaggatgtgatgggg
ccactggaaagccccctgagctcaatgagcttcgatgaggagacggtctccatggaaacc
cccagtactgaacctgagctggaacatcattccggaaccccagatgtggaagagagtttt
ctgtga
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