Triplophysa dalaica: 130437873
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Entry
130437873 CDS
T09616
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw04010
MAPK signaling pathway
tdw04020
Calcium signaling pathway
tdw04510
Focal adhesion
tdw04540
Gap junction
tdw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130437873 (pdgfrb)
04020 Calcium signaling pathway
130437873 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130437873 (pdgfrb)
04540 Gap junction
130437873 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130437873 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tdw01001
]
130437873 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tdw04090
]
130437873 (pdgfrb)
Enzymes [BR:
tdw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
130437873 (pdgfrb)
Protein kinases [BR:
tdw01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
130437873 (pdgfrb)
CD molecules [BR:
tdw04090
]
Proteins
130437873 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
C2-set_2
PKD
RIFIN
VEGFR-1-like_Ig-like
Motif
Other DBs
NCBI-GeneID:
130437873
NCBI-ProteinID:
XP_056625495
LinkDB
All DBs
Position
16:complement(142412..167173)
Genome browser
AA seq
1061 aa
AA seq
DB search
MTSFTLRLFQLTAMTIGVILLCSALEINPNVPEVILSTSSSLNITCSGWANVTWRFKREE
NVPLFHIKNQSPTSSVLSLQNVTWRHTGVYVCSENGTNDTRELTVFVPDPEVWFLDNDYV
MVTKTRKEGTIPCLVTDPQTNVTLLEKDSEMAVEGSYNPTVGYTAALEDRTYKCRGEQGG
QEKDSIIFYVFTVMTPEVLEPFINASRTVLKQGETLNVNCTVHDVELVFFSWDFPNKDVG
NIEPLTDVLSSLSMRSCLNITNVTLSSSGEYVCHAKEGIQNLRASANITITVLENGFVDL
RSHLDRNMSAQLDENVELKVEIDAYPKPSVHWTKDGGVIHGENTRQTHETRFISTLTLVR
IRLEQMGLYTVSVQNEDDFKNMTFDLEVKVPPQITQLSDHPLSGRRLAVICVADAVPSPS
IQWFSCDSMHKCSNRSAVWSPLVEDPESITIQTNITYNSTRKIHQTHSQVTFLRPQLLTI
RCEARNERGARARDIRLVNSTLFSQVAVLAAVLALVVIAIISIIILIAVWRKKPRYEIRW
KVIESVSLDGHEYIYVDPIHLPYDLTWEMPRDSLLLGRTLGSGAFGRVVEATAYGLGSSQ
TSTKVAVKMLKSTARKSETQALMSELKIMSHLGPHLNIVNLLGACTKQGPLYLVTEYCRY
GDLVDFLHRNKHSFLQYHTDKNHIANGNSGLLCSDADTATGKEYVSFASECDGGYMDMNK
DEEQTEYVPMQELTDTIKYADIQPSPYESPYQQDIYQEQGHRVDSSLIISDSTGMSYIDL
VGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDNNYISKGNT
FLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPELPMNELFYSALKRGYRM
TKPTYASDDIYEIMKNCWDEKFEKRPEFSFLVHSMGNLLSDGYKKKYSQVSDSFLKSDHP
AVVRVKPRVSSSFSGTVSPSGLPPGLLPDPTPRPQSDPHNEYIIPLPDPKLENDTEDVMG
PLESPLSSMSFDEETVSMETPSTEPELEHHSGTPDVEESFL
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtttcaccctccgtctgttccagctgactgccatgactataggtgtgattctg
ctctgttcggctcttgaaatcaatcccaacgttccagaggtcattctctccacatcatct
tctctcaacatcacctgctccggctgggcaaacgtcacctggcgcttcaaacgagaagag
aacgttcctctgttccacattaagaaccaaagtcccacttccagcgttctgagtctgcag
aatgtgacatggagacacacgggcgtgtatgtgtgttctgagaacggcaccaatgacaca
cgagagctgaccgtttttgtgcccgatcctgaggtttggttcctcgataacgattatgtg
atggtgactaagactcgtaaggagggaacgataccgtgcctggtcacagatccacagaca
aatgtcacactgttagagaaagacagcgagatggcagtggagggctcatacaaccccacc
gtgggctacaccgccgccctggaggacagaacctataaatgcagaggagagcagggcggc
caggagaaagactccatcatattctacgtcttcactgtcatgactcctgaggttctggaa
cccttcatcaacgcctccagaactgttctgaaacagggtgagacgctaaacgtcaattgt
accgttcacgacgtggagctcgtcttcttctcctgggattttcccaacaaagatgttggg
aatattgagcccttgacagatgttctgtcctcgctgagcatgcgctcttgtctcaacatc
acaaacgtcactctgtccagctctggagagtatgtgtgtcatgcaaaagagggtattcag
aacctgagagcttcagctaacatcaccataactgttctggagaatgggtttgtggatctg
agatctcatctggacagaaacatgtcagcgcagctcgatgagaacgtggagctgaaagta
gagatagatgcataccccaaacccagcgtccactggactaaagacggaggtgttattcac
ggggagaacactcgacagacacacgagaccaggttcatcagcacattgaccctggtgagg
atccgactggagcagatgggtctctacactgttagtgtccagaatgaagacgactttaaa
aacatgacctttgacctcgaggtgaaagttcctcctcagataacacaactctctgatcat
ccgctgtcggggaggagacttgcggtcatctgtgtagcagacgccgtgccgtctcccagc
atccagtggttcagctgtgacagtatgcacaaatgcagtaacagaagtgcagtatggagc
cctctagtggaggatccagagagcatcaccatccagaccaacatcacctacaacagcaca
cgcaagatccatcagactcacagtcaggtgactttcctccggccgcagctgctcaccatc
cgctgtgaagccagaaacgagagaggagctcgagccagagacatcagactggtgaacagc
acgttgttctcacaggttgctgttcttgctgctgttctggcactggtggtcattgccatt
atctccatcatcatcctcattgctgtctggaggaagaaaccgcgctatgaaatcagatgg
aaggtcattgaatcggtcagtttggacggacacgagtacatttatgttgaccccattcac
ctgccgtatgacctgacctgggagatgccacgagacagtctgttgctgggtcgtacattg
ggttctggtgcatttggacgtgtcgtggaggccacggcgtacggcctcggcagttctcaa
acctccaccaaagtggcagtaaagatgctgaaatcgacggctcggaagagcgagactcaa
gctctgatgtctgaactgaagatcatgagtcatcttggtcctcatctgaacatcgtgaac
ctgctgggcgcctgcaccaaacaaggtccgctgtacctggtaacagaatactgtcgctat
ggtgatctggtggatttcctgcacaggaacaagcacagcttcctccagtaccacactgac
aagaaccacatcgccaacggcaacagcggcctgctctgtagtgatgctgatacagcgaca
ggaaaagaatacgtgtcgtttgccagcgagtgtgatggaggttatatggacatgaacaaa
gatgaagaacagaccgagtatgttccaatgcaagagctcacggacactatcaagtacgct
gacatccagccatcaccatacgagtccccttaccagcaggacatctatcaggagcaaggt
cacagagtggacagctctctgatcatcagtgattctacgggtatgagttacattgatctg
gtgggtttcagttatcaggtggctaaaggcatggagtttctcgcatcaaagaactgtgtt
catcgagatctggcagctagaaacgttttgatctgtgaaggcaaactagttaagatctgt
gactttgggcttgccagagacatcatgcacgacaacaactacatctccaaaggcaacacg
tttctccctctgaagtggatggcaccagagagcatctttcataacttgtacaccacgctg
agtgacgtctggtcttacggcatcttactgtgggagatcttcactctcggaggaacaccg
tatccagaactgccgatgaatgaattattttacagcgctctgaagagaggttaccgcatg
accaaacccacatacgcctcagacgacatctatgagatcatgaagaactgttgggatgag
aagtttgagaaacgtccagagttctcctttctagtgcactcaatggggaaccttctgtcg
gacggatataaaaagaaatattctcaagtcagcgatagttttttgaagagcgatcaccct
gctgtggtccgtgtgaagccgcgggtttcctcatcgttttcaggcaccgtctctccttct
gggcttcctccaggacttctgcccgacccaactcctcgtccacaaagtgacccgcacaac
gaatacatcattccccttcctgacccaaagctagagaatgacactgaggatgtgatgggg
ccactggaaagccccctgagctcaatgagcttcgatgaggagacggtctccatggaaacc
cccagtactgaacctgagctggaacatcattccggaaccccagatgtggaagagagtttt
ctgtga
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