Triplophysa dalaica: 130439360
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Entry
130439360 CDS
T09616
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw00514
Other types of O-glycan biosynthesis
tdw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
130439360 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130439360 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tdw01003
]
130439360 (rfng)
Enzymes [BR:
tdw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
130439360 (rfng)
Glycosyltransferases [BR:
tdw01003
]
Glycan extension
O-Glycan
130439360 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
130439360
NCBI-ProteinID:
XP_056627937
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All DBs
Position
17:15571048..15581509
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AA seq
382 aa
AA seq
DB search
MHLSHVGTNKICFLLSVVFCGLLVLLIPSLQPPQRQGDLPQPRPHAKPTRAGHIHDLQRN
PSSAGHQRNDDAREDSFTHPYAFRDRSKDLQKVLERDAAHANSPRSRSKDSLDLRDIFIA
VKTTRKYHKSRLQLLAQTWVSKAKEQTFIFTDGKDKELRLKTGLNIINTNCSAAHTRQAL
CCKMSVEYDKFIESQKKWFCHVDDDNYVILPGLLELLSSYSHTQDVYLGRPSLDHPIEAA
ERVKSDGSVSVKFWFATGGAGFCISRGLALKMSPWASLGNFITTAEKIRLPDDCTIGYII
EALLEVPLTHTGLFHSHLENLQRLPTNNILKQVTLSYGGFQNRQNVVSVGGAFSLADDPS
RFKTVHCLLYPDTDWCPRKTHH
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcacttatcccatgttggaaccaacaaaatctgcttcctgctctctgtggtgttctgt
ggcctgctagtgctcctgataccctcactgcaacccccacagcgccaaggggatctgccc
caaccccggccccatgccaagcccactagagccgggcacatacatgacctccaaagaaac
cccagctcagctggacatcagagaaatgatgatgccagggaggacagtttcacccaccca
tatgctttcagggaccgatccaaagacttgcagaaggtgttagaaagggacgctgcgcat
gccaactcccccaggtcccgttccaaagactctttggatttaagagacatttttattgct
gtcaagacaacaaggaaatatcacaagtccaggttacagcttctggcccagacctgggtg
tccaaagcaaaagaacagacgtttatatttactgatgggaaggataaggagctcaggctg
aaaacagggcttaatatcatcaacaccaactgttctgcggcacacactcgccaagccctg
tgctgtaagatgtctgtggaatatgacaagttcatcgagtcacagaaaaagtggttctgt
catgtggacgatgataattatgtcatcctgcctggtttgctggagctactctcctcctac
tcacacacacaggacgtgtacctgggcagacccagtctggaccacccaatagaggcagct
gagagggtcaagagcgatggatcggtgtcagttaagttctggtttgctactggaggagcc
ggcttctgtatcagcagaggtttagcactcaaaatgagtccatgggcaagccttggaaac
ttcattacgactgcagaaaagattcgtctcccagatgactgtacgataggttacatcatt
gaggctttgcttgaagttcctctgacacacacaggcctcttccactcacacctggaaaat
ctccagagacttcccacaaacaacattctcaaacaggtgaccctcagttatggtggattc
cagaacagacagaacgtggtcagtgttggaggagctttctcattggctgatgatccatca
cggtttaaaacggttcactgcctactctacccagacactgactggtgcccacgcaagact
catcactga
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