Triplophysa dalaica: 130440070
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Entry
130440070 CDS
T09616
Symbol
ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
KO
K19656
intraflagellar transport protein 122
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tdw03037
]
130440070 (ift122)
Cilium and associated proteins [BR:
tdw03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
130440070 (ift122)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_IFT122_2nd
Zn_ribbon_IFT122
Zn_ribbon_IFT122_C
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Beta-prop_EML
TPR_IF140-IFT172
TPR_GEMI5
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
TPR_IFT80_172
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
eIF2A
Beta-prop_WDR75_1st
TPR_7
ANAPC3
Beta-prop_NWD2_C
TPR_2
Beta-prop_SPT8
TPR_COPA_B
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
130440070
NCBI-ProteinID:
XP_056628873
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Position
18:complement(20072091..20120462)
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AA seq
1188 aa
AA seq
DB search
MRAVPTWIDKVHDRDKVEQCIYDLAFKPDGTQLIVAAGNRVLVYDTADGTLIQPLKGHKD
TVYCVAYAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVAYNPVTHQLASCSSG
DFGLWSPEQKSVSKHKVSSKITCCGWTNDGQYLALGMMSGVVSIRNKNGEEKVKIERPGG
SSSPVWSIAWNPSKDEHNDILAVADWGQKLSFYQLSGKQIGKDRHLNFDPCCVSFFSRGE
YIVMGGSDKQASLYTKDGVRLGTIGEKNSWVWTCRVKPDSNYVVLGCQDGTIAFFQLIFS
TVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYRSRLAIQLPEKILIYE
LCSDDSSDMHYRVKEKICRRFECNLLVVCSQHIILCQEKRLQCLSFTAVKEKEWLMESLI
RYIKVIGGPAGREGLLVGLKNGAILQIFVDNLFAITLLKQNTSVRCLDMSTSRNKLAVVD
EHNTCLVYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGSGYLNIKASNFPVHQQKLHGF
VVGYNGSKIFCLHVYSMAAVEVPQSAPMYQYLERGMFQEAYQIACLGVTDNDWTDLATEA
LEGLDFNTAKKAFIRVRDLRYLELINSIEERKKRGENNNELFLADVYAYQGKFHEAAKLY
RRSGHDSRALSMYTDLRMFEYAKDFLGSADPKDTKLLIKKQADWAKNSKDPRAAADMYLT
AGEHLKAIEIIGENGWVDLLIDLARKLDKAEREPLSRCAVFFKKLNHHGYAAEIYNKMGD
LKALVELHVEARHWNEAFSLVEKQPQFRDDVYVSYAQWLAEHDRFEEAQKAFHKAGRQAE
AVRVLEQLTHNAVVESRFNDASYYFWMLSMQCLDIARDAKEKKDEMLKKFHSFQHLAELY
HVYHSVHHYMSEPFSSHMPEILFNISRFLFHNLTTDVPMGISKVDTLYALAKQSKVLGAY
KVARHAFEKLQGLKIPARYQDSMELSCLTVRSKPYHDSEDLIPMCYRCSTNNPLLNNQGN
SCINCRQPFIYSASSYEVLPLVEFYLEEDISDEEAVSLIDLEVPRVERKGAGWQEMTSEE
SQCLKLDERIEDPEDDPFTAKLSFEQGGSEFVPVVVSRAVLRSMSRRDVLIKRWPKPLSW
QYYRSLLPDVSITMCPSCFQMFHSEDYELLVLQHNCCPYCRRPIDESN
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgagagctgttcccacatggatagataaagtccacgatcgggataaggttgaacaatgt
atttatgatcttgccttcaaaccggacggcactcagctgatagtggcagctggaaacaga
gttctggtatatgacacagctgatggcacactgatacagccattaaagggacataaagac
actgtttattgtgtggcttatgctaaagatggaaaacgctttgcatcgggttcagcagat
aaaagcattatcatctggacctcaaaactagagggtatcctaaaatacactcacaatgat
tctattcagtgtgtagcttacaaccctgtcacacaccaactggcttcatgttcctcagga
gattttggtttgtggtctcctgagcagaagtctgtttccaaacacaaggttagcagtaag
atcacatgttgtggttggactaatgatgggcagtacttggctctgggcatgatgagtggg
gtggtcagcatcagaaataaaaatggagaagagaaagtgaagattgagcgaccaggcggc
tcttcctcgcctgtctggtccattgcctggaacccatccaaggatgaacacaatgatata
ttagcagtggctgattggggacagaagctgtctttctaccaactcagtggcaaacagata
gggaaggacaggcatttgaactttgacccatgctgcgtgagtttcttctcaagaggtgaa
tacattgtgatgggcggctcagataaacaggcctcgctctacactaaagatggtgttcgg
ctcggcaccatcggagaaaagaactcctgggtctggacgtgccgtgtgaagccagattcc
aattatgtggttttaggttgtcaggatggcacaatagcattttttcagcttatcttcagc
acagttcatggcttatataaggaccgctatgcctacagggacagtatgactgatgtcatc
gtacaacacctcatcactgagcagaaagtgcgaatcaaatgccgtgagcttgtgaagaag
attgctatctaccgcagcaggcttgctatccagctacctgagaagattctcatctatgaa
ctctgctctgatgactcctctgatatgcactaccgtgtcaaagagaaaatctgcaggcga
tttgagtgcaacctacttgtcgtctgctcccagcacatcatactatgtcaggaaaagaga
cttcagtgtttgtccttcacggctgtcaaagagaaagagtggttaatggagtctctcatt
cgctacatcaaagtgatcggcggcccagctggaagagaggggcttctggttggactgaaa
aatggagctattctacagatttttgtggacaatcttttcgccattacactgctgaagcaa
aacacatcggtgcgctgtctggacatgagcacgtcacgcaacaagttagcagttgtggac
gaacacaacacatgcctcgtgtatgacatccacacaaaagagctgctcttccaggaaccc
aatgcaaacagcgtggcgtggaacacacagtgtgaagacatgctgtgtttctctggcagt
ggatatctgaacatcaaggccagtaactttcctgtgcaccagcagaaactccatggcttt
gttgtgggctacaacggctccaagatcttttgcctgcacgtgtactctatggctgctgtg
gaagtaccacagtctgctcccatgtatcagtatctcgaacgtgggatgtttcaggaagca
tatcagatcgcttgtctaggtgttacagataatgattggacagatctggccacagaggct
ctggagggacttgacttcaacacagcaaaaaaagcgttcatcagggttcgagacctgcgc
tatctggagcttatcaacagcattgaggagaggaagaagagaggcgaaaataataacgaa
ctcttcctcgcagacgtttatgcctaccagggcaagttccatgaggctgccaaactgtac
aggagatctggccatgacagccgtgcgctcagcatgtacacagacctgcgcatgtttgag
tatgccaaggacttcctgggctcagcagacccaaaggacactaagctgttgataaagaaa
caggcagactgggccaagaacagtaaagatcctcgagcagcagcagacatgtacctgact
gcaggggaacatttaaaagccattgagatcatcggggaaaatggatgggtggacttgcta
atagatttggctcgtaagctggataaagcagagagggaaccattgtccagatgtgccgtg
ttcttcaagaaactgaatcatcatggctatgctgcagagatttataataagatgggtgat
ctgaaggctctggtggagcttcatgtggaggccagacactggaatgaggcgttttcttta
gttgagaaacagccacagttcagagatgatgtctatgtgtcatatgcccagtggctggca
gaacacgaccgcttcgaggaggcacagaaagccttccacaaagctggacgacaggcagag
gctgtgagagtactggagcagcttacccataatgctgtggtggagagcaggtttaatgat
gcatcttactacttctggatgctctccatgcagtgtcttgacatcgctagagacgccaaa
gagaaaaaagacgagatgctgaagaagttccacagtttccaacacctggctgaactctat
cacgtgtatcattctgtccatcattacatgtcagagccgtttagttcccacatgccagag
attctcttcaacatttcacggttcctgttccacaacttgaccacagacgttcccatgggc
atctccaaagtggatacactgtatgctctggcgaaacaaagtaaagttctgggggcgtat
aaagtagcacgacatgcctttgagaaactacaaggcttgaagatcccggcccgctatcag
gacagcatggaactcagctgtctgacagttcgctccaaaccttaccatgacagtgaggat
ctgattcccatgtgttatcgatgttctaccaacaaccctctgctgaacaaccagggcaac
tcttgtattaactgccgacaacctttcatatattctgcttcctcttacgaggtgcttccg
cttgtggagttttatttggaggaggacatctccgatgaggaggctgtgtctctcattgac
ctggaagtgcctcgtgtagaaaggaagggtgctggctggcaggagatgaccagcgaggaa
tctcagtgtctaaagctggatgagaggattgaagaccctgaggatgacccctttacagcc
aaactcagctttgagcagggtggcagtgagtttgtcccagtggttgtgagtcgagcggtt
ttgcggtccatgtccagacgagatgtcctgatcaagcgctggcccaaacctctcagctgg
cagtactaccgatctctgctccctgatgtcagcatcaccatgtgtccttcatgctttcag
atgttccatagtgaagactatgagttgctagttcttcagcacaattgttgcccgtactgc
aggagacccattgacgagtccaactaa
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