Triplophysa dalaica: 130440272
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Entry
130440272 CDS
T09616
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tdw01009
]
130440272 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130440272 (trpc5a)
Protein phosphatases and associated proteins [BR:
tdw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130440272 (trpc5a)
Ion channels [BR:
tdw04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130440272 (trpc5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
YVC1_C
LHD_TRPY1
Nup88
Motif
Other DBs
NCBI-GeneID:
130440272
NCBI-ProteinID:
XP_056629267
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Position
2:24291257..24343401
Genome browser
AA seq
1044 aa
AA seq
DB search
MNPMSHLYYKKSSYSPYRDRIPLQIVRAEVELSTEERSFLCAVEKGDYAGVQHALREAEV
YYNIDVNCVDPLGRSGLLIAIENENLEVMELLLDNGVNTGDALLYAIRKEVVGAVELLLS
HRKPSGEKQVPSLMMDAQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDDQSEELDPREGRDLAKLKLAIKYH
QKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVMCIIIGLLFPVFSIIYLLAPKSTLG
LFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHIQGPPPTVVEWMILPWVLGFIWA
EIKEMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTLI
AEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQ
LYFYYETKAADEPNHCKGIRCEKQNNAFSTLFETLQSLFWSIFGLLNLYVTNVRARHEFT
EFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTL
PPPFNIIPSPKSCWYLCQWVHKRLCGSEAALPEEPHKHENLKEFTEKHADRLIQNQHYQE
VIRSLVKRYVASMIRSAKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPPRRNYSSSS
EATFRDEVSDDGEASSNNCHHSDASSIGAKGVSFKTNTTSDRSYGVSALFCSISGVEVAT
ATAASPSYREGKPKINGLRKNPSPSSSLSSMGPPRPALSRTWRRLSRFSSSKKNSFRRLG
LLFSRMGSHLPQPAGVTAATYTISDGLLHPPGAWQDLGFTRGDGPVTRSETNLNRVDVAT
LNESDSVAMATNGQRANVRDVLLTLGPLSPPTSLHCASNFSASSSRLLDSSEDVFQGLAG
PCDGQMRDSSLWVTEQDDSVTTQL
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatgtcacacctgtactacaaaaagagcagctactctccataccgtgaccgg
atcccactccagatagtccgggcggaggtcgaactttctacagaagagcgttccttcctt
tgcgccgtggagaagggcgactatgcaggtgtccagcatgctctgcgagaggctgaagtg
tattacaatatcgacgtaaactgcgtggatccgttaggccgcagtgggctgctaatcgcc
atcgagaatgaaaacttagaggtgatggagcttctcctggataacggggtgaacaccggt
gatgccttgctttacgccatccgcaaagaagtggtgggggctgtggagttactgctgtcc
cacagaaaacccagcggcgagaaacaggttccatccttaatgatggacgcccagttctca
gaattcacgcccgacatcactcccattatgctggctgcccacacgaacaactacgagatc
atcaaactcctggttcagcgcaaggtcaccatccccaggccgcaccagatccgctgcgac
tgcgtggagtgcgtgtccagctccgaagtggacagcttacgtcactctcgatctcgcctc
aacatctacaaagccctcgccagcccttctctcattgccctctccagcgaagatcccatt
ttgaccgccttcaggcttggctgggaactcaaggagctcagtaaggtcgagaatgaattt
cgacaggagtacgaggaactttctcaacagtgtaagctctttgctaaagacctgctggac
caggcgcgtagctcccgtgagctggagaccatactcaatcaccgtgacgaccagagcgag
gagttggacccgcgagagggcagagatcttgccaaactcaagctggccattaaataccac
caaaaagagtttgtggctcagccgaactgtcagcagctcttggccacgttgtggtatgac
ggtttccccggctggcgtcgccggcactgggcggtgaagttggtcatgtgtattattatc
ggcctgctctttcctgtcttttccattatctacctgttggctcctaaaagcacattaggg
ctcttcatcaaaaaacccttcatcaaatttatctgccacacggcctcctacctcaccttc
ctcttcctcctcctgctggcctcgcagcacatagcacgcaccaacctacacatacagggc
cctccgcccactgttgtggagtggatgatactaccttgggtgctgggtttcatctgggct
gagatcaaagagatgtgggacggaggttttaatgaatatgtccatgactggtggaaccta
atggacttcgccatgaattctctctatttggccacaatatccctcaagatcgttgcctat
gtaaagtacaacagttctcgtcctcgagaggagtgggagatgtggcacccgacgctaatt
gccgaagctttgttcgctatcgctaacatcttcagctcactgcggctcatctcccttttc
acggccaactcacacctggggccgctgcagatctctctgggccggatgctgctggacatc
ctcaagttcctcttcatctactgtctggtgctgctggctttcgctaacggactaaaccag
ctttacttttactacgagaccaaggccgcagacgaacccaaccactgcaagggaatccgg
tgtgagaaacagaacaatgccttctctacgttatttgagaccctgcagtccctgttttgg
tcgatattcggcctactgaatctgtacgtgaccaacgtgagggcgcggcacgagttcacc
gaatttgtgggcgccaccatgttcggcacgtacaacgtcatctccctggtggttttgctt
aacatgctcattgctatgatgaacaactcgtatcagctcatcgctgaccacgctgacatt
gagtggaagtttgctcggaccaagctgtggatgagttacttcgacgagggcgggacactc
ccccctcccttcaacatcatccccagtcccaagtcatgctggtacctgtgtcaatgggtg
cacaagcgtctctgcgggtcagaggccgctctgcccgaagaaccccacaaacacgagaac
ctgaaggaattcacagaaaagcacgctgacagactgatccaaaatcagcattatcaggag
gtcattcgaagtctggtgaagaggtacgtggcgtccatgattcgcagtgctaagacgaac
gaaggccttacagaagagaactttaaggagttaaaacaggacatttccagcttccgctac
gaagttttggacctcctcggcaaccggaagccgccccggaggaactattcctccagcagc
gaggccacgttcagagacgaggtcagcgatgatggtgaggcgtcgagcaacaactgtcac
cacagcgacgccagcagcatcggagccaagggcgtgtctttcaaaaccaacacgacttcg
gatcgctcctatggcgtctccgccctcttctgctccatttcgggagtggaggtcgccacg
gcgacggcagcatcgccgtcgtacagggagggtaaaccaaagatcaacggattaaggaag
aacccctcgccctcctcttccctttcctccatgggtccgccaagacccgcactttcacgg
acttggaggcgcctttcacgcttctctagctccaagaagaactccttcagacgactcggc
ctgctcttctcacgcatggggagtcatcttccccagcccgcaggcgttacggccgcaacc
tacactatctcagatggattgcttcacccacctggggcttggcaggacttaggcttcacc
aggggtgacggtcctgtcacccgcagtgagaccaacctcaatcgggtggatgtggccact
ttaaatgagagcgacagtgttgccatggcaactaatggacagagagctaacgtgagggat
gttttgctgacattaggacctctttccccacccacctccctccactgtgcttccaatttt
tcggcttccagttcccgcctcctggactccagtgaagacgtgttccagggattggcaggg
ccttgtgacggacagatgcgagactcctctctctgggttactgaacaggatgattcggtg
accacgcagctatag
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