Triplophysa dalaica: 130440366
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Entry
130440366 CDS
T09616
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw00310
Lysine degradation
tdw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130440366 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130440366 (prdm6)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130440366 (prdm6)
Enzymes [BR:
tdw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
130440366 (prdm6)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130440366 (prdm6)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
130440366 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-H2C2_2
zf-C2H2_11
zf-C2H2_jaz
zf-C2H2_15
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
130440366
NCBI-ProteinID:
XP_056629435
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All DBs
Position
18:229364..254454
Genome browser
AA seq
544 aa
AA seq
DB search
MLKPSEPSGSAFLKVDPTYIQHWQHLFPQNPLKTAALENLRQRPNLISSTSSASLPAPSS
GPSVSSLAGLSQLAVPQIALFGQTESSGSGTGTGGSCQARELSNFQNDRASRLKLSSEEL
DFYLYGQQRMEIIPLNNHSGDVHNRCDMCADNRNGECPMHGPLHSLRRLVGTSSASAAVP
PPEVPEWLRDLPREVCLCTSTVPGLGYGICAAQRIPQGTWIGPFQGVSLPLDKAQSGSLR
NTRHLWEIYDQEGALQYFIDGNEPSKSSWMRYIRCARHCGEQNMMVVQYRSCIFYRACTD
IPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPTTVIEAMSRQETLQSFSKSPKSSSL
VLQRSLVFPQSPSSRSFSLLDKSGHNVTESVLNQMSSKNQRVLASPTSTSQLSSEFSDWH
LWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKC
GYCGRAFAGATTLNNHIRTHTGEKPFKCERCDRNFTQATQLSRHQRMPNECKPISESSES
IEVD
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccgagcgagcccagcggttctgctttcctcaaagtggacccgacttacatc
cagcactggcagcatctgttcccgcagaacccgctgaaaacagccgcgctggagaacctc
cgacagagacccaacctcatctcctcgacctcatcggcatcgttaccggcgccctcgagc
ggtccctccgtgtcgtctttagcgggtttgagtcagctcgcggtcccgcagatcgcgctg
ttcggacagacggagagcagcggcagcggcaccggcaccggcggctcgtgtcaggccaga
gaactttcaaactttcagaatgatcgcgcgtcccgtctgaagctgagctccgaggaactg
gacttctatctgtacggccagcagaggatggagatcatccctctaaacaaccacagcgga
gacgttcataaccgctgtgacatgtgtgcggacaaccggaacggggaatgccccatgcac
ggccccctgcactcgctgcggaggctggtggggaccagcagcgcctcggcggccgttccc
cccccagaggtcccggagtggctgagagatttgccccgtgaggtgtgtctgtgcaccagc
accgtcccgggtctgggctacggcatctgtgccgcccagcgcatcccacagggcacctgg
atcgggcccttccagggagtgtctctaccgctggacaaggctcagtccggttccctccga
aacacaagacacttatgggagatttatgatcaggagggagcgctgcagtacttcattgat
ggtaatgaacccagtaaatccagctggatgagatacatccgctgtgccagacactgtgga
gaacagaacatgatggtggtacagtacaggtcgtgtattttctaccgggcgtgtacagat
attcctcgtggaacagagcttctggtgtggtataatgacagctatacgtctttctttgga
attccgctacagtgcatcgctcaggatgaaaacttaaacgtgccgacaactgtaatcgag
gccatgagtcgacaggagacgcttcagtccttcagtaaaagtcccaaatcctcttcactg
gttctgcagcgttcactggtgtttccccagtcgccctcctcacggagcttctctctcctg
gacaagagcggacacaatgtcacagagtccgttttgaaccagatgagctctaaaaaccag
cgcgtgctggcgagtcccacatccaccagtcagctgagttcagagttcagtgactggcat
ctgtggaaatgcggccagtgcttcaaaaccttcactcaacgcattctgctgcagatgcac
gtgtgcacacaaaaccccgacagaccgtatcagtgtggacactgttctcaatccttctct
caaccctcggagctgaggaatcacgtggtgacacactccagtgaccggccctttaaatgc
ggctactgcggccgggcgttcgctggggccacgactctcaacaaccacatccgcacacac
acgggagagaagcctttcaagtgcgagagatgcgaccgcaatttcacgcaggccacgcag
ctcagcagacaccagcggatgcccaacgagtgcaaacccatcagcgagagcagcgaatca
atcgaggtggattaa
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integrated database retrieval system
