Taylorella equigenitalis ATCC 35865: KUI_0472
Help
Entry
KUI_0472 CDS
T02186
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
tea
Taylorella equigenitalis ATCC 35865
Pathway
tea03030
DNA replication
tea03410
Base excision repair
tea03420
Nucleotide excision repair
tea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KUI_0472 (ligA)
03410 Base excision repair
KUI_0472 (ligA)
03420 Nucleotide excision repair
KUI_0472 (ligA)
03430 Mismatch repair
KUI_0472 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tea03032
]
KUI_0472 (ligA)
03400 DNA repair and recombination proteins [BR:
tea03400
]
KUI_0472 (ligA)
Enzymes [BR:
tea01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
KUI_0472 (ligA)
DNA replication proteins [BR:
tea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KUI_0472 (ligA)
DNA repair and recombination proteins [BR:
tea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
KUI_0472 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KUI_0472 (ligA)
MMR (mismatch excision repair)
DNA ligase
KUI_0472 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KUI_0472 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
HHH
Nlig-Ia
PTCB-BRCT
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AFN35558
UniProt:
A0ABN4AUR0
LinkDB
All DBs
Position
509311..511356
Genome browser
AA seq
681 aa
AA seq
DB search
MSEGDFSDYEALKSLISVHDKAYYIDDNPQISDEEYDGLMRKLLDYEQAHPEWVTSDSPS
QRVGGVALKIFNSVRHAVPMLSLGNVFNPEELTAFYNRMVEAVGSDDFEFNCEPKFDGLA
ISIRYENGVLKTASTRGDGLTGEDVTAQVSTIRTVPLKLNVPSKEALPKIIEVRGEALML
RSDFDNLVKRQEEEGLQTFANPRNAAAGSLRQLDPKITAKRKLRFYAYGLGEFKSLGSEE
PKSQSQLLDYLSELGFAVTEYRSVKKGLDGLLNFFEHIKAKRDTLPFDIDGVVYKVDSFE
LQQKIGFVSKAPRFAIAHKFAAEQMQTKLLDIEVQVGRTGALTPVARLEPVFVGGVTVRK
ATLHNEDEIERKNLMIGDTVIVRRAGDVIPEVLESVIDLRPEDAVKFVMPTICPVCGSAV
EKPEGEAVARCTGGLVCGAQITQGIIHAVSRKALNIEGLGDKHIQKLVSTEKIKRLDDLF
KLTVDDLNILGRNAEDSKLEVLAPTLHARIQASKSTTLSRFLFALGIRHVGETTARDLAK
YFGDLYSIMQASTEELVSVPNVGEVMATSIHTFFNEPHNREVISNLLELGFVLNAEEEAI
QINPAIAGHSFVVTGTLENWKRDEISQVIISSGGRINSSVSKKTDYLLMGAEPGDSKVKK
AQEVGTKILSEAEFIQMLEQK
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaggtgatttttcagattacgaggcactcaaatctttaatatctgttcacgat
aaagcttactacatcgacgataatccacagatttcagatgaagaatatgatgggttgatg
cgtaagcttttggattatgaacaagcccatcctgagtgggttacttcagattctccatcc
caaagagttggaggagttgctcttaaaatttttaactcagtcagacatgcagtccctatg
ctttctttgggtaatgttttcaatccagaggaactaactgctttttataatcgcatggtt
gaagctgtgggctctgacgactttgagtttaattgtgaaccgaaatttgacggtttggct
ataagcattcgctatgaaaatggtgttttaaaaacagcatccacgcgaggagatggacta
actggtgaggatgttactgcacaagtaagtactattagaacggttcctttaaagttaaat
gtgccgagcaaagaggcattgccaaagataattgaagtcagaggtgaagccttaatgctt
cgaagcgactttgataatctagtgaagcgacaggaggaggaagggctacaaaccttcgca
aatcctagaaatgctgcagctggtagcctacgtcaattggacccaaaaattaccgcaaaa
agaaagcttagattttacgcatatgggttgggggaatttaaatctttaggttcagaggaa
cctaaatcacaaagtcagcttttagattatttgtcagagcttggatttgctgtcaccgaa
tatagatctgtaaaaaagggacttgacgggcttttaaatttttttgaacacattaaagct
aaaagagacacactgccatttgatatagatggagttgtatacaaagttgattcatttgag
cttcaacagaaaataggttttgtttctaaggctccacgttttgcaattgcacataaattt
gcagcagagcaaatgcaaaccaaacttttagacattgaagttcaagtgggtcggactgga
gcgttgacaccagttgcaagattagaaccagtgtttgtcggtggtgttactgttagaaaa
gctactcttcataatgaagatgaaatagagcgaaaaaatcttatgataggtgatacagtt
atcgtaagaagggctggtgatgttattcccgaagttttagagtctgttattgatctgcgt
cctgaagatgctgttaaatttgttatgcctacaatctgtcccgtgtgtggttcagcagtt
gaaaagcctgagggagaggctgttgctcgatgtacaggcggacttgtttgcggtgctcaa
attacacaaggtattattcatgcggtatcccgaaaagccttaaatatagagggtttgggt
gataaacatatccaaaagctcgtgagtactgaaaaaatcaaaaggcttgatgatctcttt
aaactaactgtagatgacttaaatatactcggtcgtaatgcagaagattcaaaacttgag
gttttagcccctactttacatgcacgcattcaagctagtaaatcaactactttaagtaga
tttttatttgcattaggtattcgtcatgtcggcgaaacaacagctagggatcttgctaag
tattttggtgatttatattctattatgcaggcaagtaccgaagaattagtttctgtacca
aatgtgggtgaagtgatggctacatcgattcatacatttttcaatgaacctcataatcga
gaagttatatctaatctacttgaacttggattcgttttgaatgctgaagaggaagcgatt
caaataaatcccgcaattgcaggtcacagttttgtggtaaccggcacacttgaaaactgg
aaaagggatgaaatctcgcaagttataatttcttcgggaggtcggattaattcatcagtc
tcaaagaaaactgattatcttttgatgggggcagagcctggcgatagcaaggttaaaaag
gctcaagaagtaggaaccaagatactatccgaagctgaatttatacagatgcttgagcaa
aaataa
DBGET
integrated database retrieval system
