Terrabacter sp. C0L_2: U5C87_12910
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Entry
U5C87_12910 CDS
T09725
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ted
Terrabacter sp. C0L_2
Pathway
ted00300
Lysine biosynthesis
ted00550
Peptidoglycan biosynthesis
ted01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ted00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
U5C87_12910
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
U5C87_12910
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ted01011
]
U5C87_12910
Enzymes [BR:
ted01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
U5C87_12910
Peptidoglycan biosynthesis and degradation proteins [BR:
ted01011
]
Precursor biosynthesis
Amino acid ligase
U5C87_12910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF1611
Motif
Other DBs
NCBI-ProteinID:
WVM94906
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Position
2823474..2825162
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AA seq
562 aa
AA seq
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MSPSPLRPASSGVLLRDLTARIGTGSRLRDAWPDGADGADVAVTGVTLDSRAVLPGDLYA
ALPGFNVHGARFAGDAVAAGAVTVLTDEAGLAELSTTVASDVPVIVADDPRAVLGAIAAE
VYGHPSEELTMVGITGTNGKTTTAYLVESALRAHGQRTGLIGTVETRIGDERIESVRTTP
EATDLHALLGLMRERDLDACVMEVSSHALELRRVDGVVYDVALFTNLSQDHLDFHPTMED
YFVAKASLFTPERSRAAVVCVDDAWGRRLAAQATVPTTTLGTKPEGGGESDWVADRVEER
DAPGAFSLREPATGRVLRLVSHLPGGFNVANTALAALGLLQIGLSPAEVEAAMSVAPDVP
GRMEVVAPGGPEGPRCVVDFAHTPDAVDAALAALRGSTPGRLIAVLGAGGDRDRGKRPAM
GAAAARRADVVVVTDDNPRSEDPGEIRAAVIAGAREAVRDAAQGASQDGSQVEGQVEGQD
EGPDRALGATEIIDGGPRSSAIAEAIALAVVDAGEDRPVDTVVVLGKGHEKGQEIHGVKH
PFDDRDAVRAALAAVTSSGVTS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaccttcccctctccgacccgccagctcgggcgtgctccttcgcgacctgaccgcc
cggatcgggaccggctcccgcctgcgcgacgcctggcccgacggtgccgacggtgccgac
gtggccgtcaccggtgtgacgctcgacagccgtgccgtcctccccggcgatctgtatgcc
gccctgcccggcttcaacgtgcacggcgcccgcttcgccggcgacgcggtggccgccggc
gccgtgaccgtcctcacggacgaggccggcctcgccgagctgtcgacgaccgtggcgtcg
gacgtgcccgtcatcgtggccgacgacccccgtgcggtcctcggcgccatcgccgccgag
gtctacgggcacccgtccgaggagctgacgatggtcggcatcacgggcaccaacggcaag
acgacgacggcctacctcgtcgagtcggcgctgcgcgcccacgggcagcgcaccggcctc
atcggcacggtcgagacgcggatcggcgacgagcgcatcgagtcggtgcgcacgaccccc
gaggcaaccgacctgcacgcgctgctcggcctcatgcgcgagcgagacctcgacgcctgc
gtcatggaggtctcgagccacgccctcgagctgcgccgggtcgacggcgtcgtctacgac
gtggcgctcttcaccaacctctcccaggaccacttggacttccatcccacgatggaggac
tacttcgtcgccaaggcgtccctcttcacgccggagcgctcccgcgccgcggtcgtgtgc
gtcgacgacgcctggggtcggcgtcttgcggcccaggccaccgtgccgacgaccaccctg
gggacgaagcccgagggtggcggcgagagcgactgggtcgccgaccgggtcgaggagagg
gacgcaccgggtgcgttctcgctgcgcgagccggcgaccggtcgcgtgctgcgactcgtc
tcccacctgcccggcggcttcaacgtcgccaacaccgcccttgccgccctcgggctgctg
cagatcggtctgtcaccggccgaggtcgaggctgcgatgtccgtggccccggacgtgccg
ggacgcatggaggtcgtcgcgccgggtggaccggagggtccgcggtgcgtcgtcgacttc
gcgcacacccccgatgcagtggacgccgccctcgcagcgctccgcggctcgaccccgggg
cggctcatcgccgtcctgggcgccggcggggaccgcgaccggggcaagcgccccgccatg
ggcgcggcggccgcgcgtcgggccgacgtcgtcgtcgtcaccgacgacaacccccgctcc
gaggacccgggtgagatccgggcagcggtgatcgccggggcacgcgaggcggtccgagac
gcggcacagggcgcgagccaggacgggagccaagtcgagggccaagtcgagggccaggac
gagggcccggaccgggcactgggggcgaccgagatcatcgacggtgggccgcgttcgagc
gccatcgccgaggccatcgcgctcgcggtggtcgatgcgggggaggaccgccctgtcgac
accgtcgtggtgctcggcaagggacacgagaagggtcaggagatccacggagtgaagcac
ccgttcgacgaccgcgacgccgtgcgcgccgccctcgcagccgtcacctcgtcgggggtg
acgtcgtga
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