Tessaracoccus palaemonis: KDB89_12020
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Entry
KDB89_12020 CDS
T08695
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tej
Tessaracoccus palaemonis
Pathway
tej03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KDB89_12020 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tej03400
]
KDB89_12020 (nth)
Enzymes [BR:
tej01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KDB89_12020 (nth)
DNA repair and recombination proteins [BR:
tej03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KDB89_12020 (nth)
Prokaryotic type
KDB89_12020 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QXT62462
LinkDB
All DBs
Position
2631209..2631898
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AA seq
229 aa
AA seq
DB search
MLSAPPAEINSALGRAYPDARCELDFRNPFELLVATVLSAQSTDRRVNAVSEVLFERWPT
ASELATAEPLDVESVITPVGFYRTKTASVIGLSRRIVDDFDGVVPGTLEELVTLPGVGRK
TANVVLGNAFDVPGVTPDTHLIRLANRFGWVASTKPDDVERAVGRLFPPCDWVMVCHRVI
WHGRRCCHARRPACGACPVADLCPSRHIGEQDPTRSSSTRFHIISPRNS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgctttccgcgccgccggccgagatcaactcggcgctggggcgggcctatcccgacgcc
aggtgcgaactggacttccggaacccgttcgagttgctcgtcgcgaccgtcctctcggcg
cagtcgacggatcgccgggtcaacgcggtatcggaggtacttttcgaacgctggcccacg
gcgtccgaactggcgacggccgagccgctcgacgtggagtcggtcatcacgcccgtgggc
ttctaccgcacgaagaccgcgtccgtcatcgggctgtcgcggcgcatcgttgacgacttc
gacggcgtcgtccccggcacgcttgaggagctcgtcacgctgcccggagtcggcaggaag
accgccaatgtggtgctcggcaacgccttcgacgtccccggcgtcacgccagacacccac
ctcatccggctggcgaaccggttcggctgggtcgccagcacgaagccggacgacgttgag
cgggccgtcggacggctgtttccgccgtgcgactgggtcatggtgtgtcaccgcgtcatc
tggcacggtcgacgctgctgtcacgccaggcggccagcctgcggcgcgtgtcccgtcgcg
gacctgtgcccgtcgcgccacatcggcgagcaggatcccacgcgctcctcgtcgacaaga
ttccacatcatctcaccacggaactcatga
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