Thermosynechococcus vestitus: tll0857
Help
Entry
tll0857 CDS
T00090
Symbol
lig
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
tel
Thermosynechococcus vestitus
Pathway
tel03030
DNA replication
tel03410
Base excision repair
tel03420
Nucleotide excision repair
tel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
tll0857 (lig)
03410 Base excision repair
tll0857 (lig)
03420 Nucleotide excision repair
tll0857 (lig)
03430 Mismatch repair
tll0857 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tel03032
]
tll0857 (lig)
03400 DNA repair and recombination proteins [BR:
tel03400
]
tll0857 (lig)
Enzymes [BR:
tel01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
tll0857 (lig)
DNA replication proteins [BR:
tel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
tll0857 (lig)
DNA repair and recombination proteins [BR:
tel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
tll0857 (lig)
NER (nucleotide excision repair)
GGR (global genome repair) factors
tll0857 (lig)
MMR (mismatch excision repair)
DNA ligase
tll0857 (lig)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
tll0857 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
Nlig-Ia
PTCB-BRCT
DNA_ligase_ZBD
BRCT_2
HHH
Motif
Other DBs
NCBI-ProteinID:
BAC08409
UniProt:
Q8DKK2
LinkDB
All DBs
Position
complement(875740..877809)
Genome browser
AA seq
689 aa
AA seq
DB search
MVLKEPPAERIQQLRRLLQRASYAYYALDQPIMEDEVYDQLYRELQELEAAYPEYITPDS
PTQRIGEAPVSQFESVSHRIPLYSLENAFTFADMVAWQERWQRYWRTLRQEEPLPPAEYV
CELKMDGVALALTYENGLLVRGATRGDGQRGEDVTSNVRTIRPIPLRLALDNPPPVVEVR
GEAFLPLERFHQLNQERQAQGEPPFANPRNAAAGTLRQLDPRIVAQRQLDFFAYALHLPE
GGSVPLGENQAGEPQSQRQVLYALQHLGFRVNPHHADCPDLEAVKAYYDRWQTARHQLPY
LTDGIVVKLNDLKLQQTLGFTQKFPRGSIAWKYEPEQAITDVLAITVQVGRTGALTPVAE
LAPVQLAGTTVSRATLHNADYIAELDLHIGDKVVIHKAGEIIPEIVRVFPELRPPTARPF
TMPTACPECHQPVVRPANEAVSRCGNPRCPAIVRGQIRHWASRDALDIQGLGEKLVQQLV
TKELVRTPADLYRLTAAQLLSLERMGQKSADKLLVAIANSKQQPWPRVLYGLGIRHVGSV
NAQLLADRFKSVEELATATVADLCGVDGIGEEIAQAVQEWFQDPDHQSLIADLQALGLQL
AAALHPAQKALTTEKSLNGKRFVITGTLPTLTREQAKALIQKHGGHVSESVSRQTDYLVV
GEKAGSKLRRAQELGIPCINETELIQMCR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggtcttgaaggaaccccccgctgaacgaattcaacaactgcggcgcttacttcagcgt
gcgagctacgcctactacgccctcgatcagccgatcatggaagatgaggtctatgaccaa
ctctatcgcgagcttcaggaattagaggccgcttatcccgagtacattacccccgacagt
cccacccagcggatcggtgaagcgcccgtcagtcaatttgagagtgttagccatcgcatt
cccctctatagccttgaaaatgcctttacctttgccgacatggtggcgtggcaggaacgc
tggcagcgctattggcgcaccctacggcaagaggagcccctccccccagcagaatatgtc
tgcgaactcaaaatggatggcgtggctcttgccttaacctacgaaaacggtttactcgtg
cggggagcgactcggggcgatggccaacgcggtgaggatgttaccagcaatgtgcgcaca
attcgcccaattcccctgcgcttagcccttgacaatccaccccctgtcgttgaggttcgc
ggcgaagcctttttgcctttggagcgattccatcaactcaaccaagaacgccaagcccag
ggggagccccccttcgccaatccccgcaatgccgcagctggtaccctgcgtcaactggat
ccccgcattgttgcccaacgccaattagacttttttgcctatgccctgcatttgcctgaa
gggggtagcgttcctttgggggagaaccaagcaggggaaccccaatcgcagcggcaagtg
ctctatgcactgcaacaccttggctttcgggtcaatccccaccatgccgactgccctgac
ctcgaggctgtgaaagcctactacgatcgctggcaaaccgcacgccaccaactgccctat
ctgaccgatggcattgtggtcaagctcaatgacttaaagctgcaacagacccttgggttt
acgcaaaagtttccccgaggttctattgcttggaagtacgaaccggagcaggccattacc
gatgtgctggcgattacggttcaggtgggacgcacaggggcccttactcccgtggctgaa
ctggcgccggtgcaattagcaggtaccactgtatcacgggcaacgttgcacaatgcagac
tacattgctgagttggatttgcacattggcgataaagtcgtcatccacaaagcaggggaa
atcattccagagattgtgcgggtgtttcctgaattgcgaccgccaacggctcgacccttt
acgatgcccaccgcctgtcccgaatgccaccagccagtggtgcgtcctgccaatgaggcg
gtgagtcgctgtggcaatcctcggtgtccagcgatcgtgcgcggccagatccggcactgg
gcaagtcgggatgccttggatattcaaggcctaggggaaaagctggtacagcaattggtg
acgaaggaattggtgcgcacccctgcggatctctatcgcctgacggcagcacaattgttg
agcctcgagcgtatgggtcaaaagtccgctgataaattgttggtggcgatcgccaactcg
aaacaacaaccgtggccacgggtgctctacggcttaggcattcgccatgtggggagtgtc
aatgcccaactgcttgccgatcgattcaagtctgttgaggaactcgccaccgccaccgtc
gccgatctgtgtggggttgatggcattggtgaggaaattgcccaagcagttcaggagtgg
tttcaagaccctgatcaccagtctctaattgctgatctgcaggcattgggactgcaactg
gcggcagcgcttcaccctgcgcaaaaggccctgacgacggagaaatccctcaatggcaaa
cgttttgtgattaccggcaccctgcccaccctcacccgtgagcaagcaaaagccctgatc
caaaaacacggcggccacgtgagtgagagtgtgagtcggcaaacggattatctggtggtg
ggcgaaaaagcagggagcaaattacgacgtgctcaagaattgggcatcccctgcatcaat
gaaacagaacttatacaaatgtgtcgttag
DBGET
integrated database retrieval system
