Tunturiibacter empetritectus: RBB75_02045
Help
Entry
RBB75_02045 CDS
T10212
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
temp Tunturiibacter empetritectus
Pathway
temp00300
Lysine biosynthesis
temp00550
Peptidoglycan biosynthesis
temp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
temp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RBB75_02045
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBB75_02045
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
temp01011
]
RBB75_02045
Enzymes [BR:
temp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RBB75_02045
Peptidoglycan biosynthesis and degradation proteins [BR:
temp01011
]
Precursor biosynthesis
Amino acid ligase
RBB75_02045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
XCB28635
UniProt:
A0AAU7ZJF0
LinkDB
All DBs
Position
complement(533764..535233)
Genome browser
AA seq
489 aa
AA seq
DB search
MDRYCTSVEVSGVEYDSRRVKSGHVFVAMRGEATDGNRYIEAAVAKGATAVVTDSREAYE
KLRHEHVGVGAALVERGRRALAEVSAAVMGHPERDLALSAVTGTNGKTTTAFLLEAMLRS
VGRTCVLIGTIETHVGDEVRVSPHTTPESRDVLEIFADGVKAGATEAVMEMSSHALEQER
VWGLPVDVAMFTNLTQDHLDYHGTMEKYFAAKARLFEGVGSTPPRIAVVNHDDEYGGLIE
KAAIGCSELWTYGFKKNYGGVPEFRAENVTLQAGETSFDWKTPMGTVEMRSSLTGRVNVY
NLLAASCAALARGLSLEQIAEAAGKLMPVPGRFETIANQLGFTVVVDYAHTDDALRNLIS
LARELVAERGARVITLFGCGGDRDKTKRPRMGRAAGEGSDLVVLTSDNPRSEDPMTIINE
ALVGVRETTARCIVEQDRAAAIEIAIRAAKVGDIVLIAGKGHEKVQILRDGTVPFDDVAV
AAEVLREIA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggatcggtattgcacttccgtcgaggtttcgggggtggaatatgactctcggcgggtg
aagagcgggcatgtgtttgtcgcgatgcggggtgaggcgacggatggaaatcgctatata
gaggcggctgtcgcgaagggggcgacggcggtggtgacggactctcgcgaggcttatgag
aagctgcgccatgagcatgtgggcgttggcgcggcgttggtggagcgggggaggcgggcg
ctggcagaggtaagcgctgcggtcatggggcatccggaacgtgatcttgctttgagcgca
gtgaccgggacgaacggaaagacgactacggcattcttgctggaggcgatgctgcgtagt
gtgggacggacgtgtgtgttgatcgggacaattgagacacatgttggagatgaggtgcgg
gtttctccgcatacgacgccagagtcgcgggatgttctggagatctttgcggatggtgtg
aaggcgggagctacggaggccgttatggagatgtcatcccatgcgctggagcaggagcgt
gtctgggggctgccggtggatgtggcgatgtttacgaatctgacacaggatcatctggac
tatcacgggacgatggagaagtactttgcggcgaaggcgcgactgttcgaaggagttggg
tcgactcctccgaggatagctgttgtaaatcatgatgatgaatatggcggcttgattgag
aaagcagctataggatgcagcgaactttggacttacgggttcaagaaaaactacggtggg
gttccagagtttcgcgcggagaatgtgaccctgcaagcaggtgaaacgtcttttgattgg
aagacgccaatggggacagtggagatgagatcttccctgaccgggcgagtgaatgtgtac
aacctgctagcagcatcttgtgctgccttggctcggggtttgagtttggagcaaattgcg
gaagctgctggtaagttgatgcctgttccgggacgctttgagaccatcgcgaatcaactc
ggctttactgtggtggtggactacgcgcacacggacgatgctttgcggaacttgatctcg
ctggcgagggagttggtggcggagcgcggggccagggtgatcactttatttggctgtggc
ggcgatcgggataagacgaagcgcccgcggatgggcagggcggcgggcgagggaagcgac
cttgtggtgcttacgagcgacaatcctcgaagtgaagatccgatgacaattatcaacgag
gctctggtgggggtgcgggagacgacggctaggtgcatagtagagcaggatcgagctgcg
gcgatcgagattgcgattcgcgcggccaaggttggagacattgttctgatcgctggaaag
ggccatgagaaggtgcagatcctgcgagatgggacggtgccgtttgatgatgtggcagta
gctgctgaagttttgagggagatagcgtga
DBGET
integrated database retrieval system
