Tauraco erythrolophus (red-crested turaco): 104374016
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Entry
104374016 CDS
T08611
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
teo04040
]
104374016 (SCN4A)
Ion channels [BR:
teo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104374016 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
104374016
NCBI-ProteinID:
XP_009978333
LinkDB
All DBs
Position
Unknown
AA seq
1840 aa
AA seq
DB search
MAGVPHIPGPENLRPFTPASLAAIEQRIAEAEALKVKRQQVELPEEEEIKPSSDLEAGKN
LPLIYGDPPLELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYLLGPFHPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTMSNPPVWSKNVEYTFTGIYTFESLIKILSRGFCI
DNFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPLNDTLLGDFGLDNDTLAN
VTLYGNFTDDIAGNFTGNFTSNSTFDFEAYINDEANFYFLEGALDALLCGNSSDAGKCPE
GYQCMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVVI
FLGSFYLINLILAVVAMAYAEQNDATMLEEQQKEEEFQQLMEQLKKHQEEQEKMLQERQS
SSGSLPSSTAGKERDSELNSDQDKAKDCNGQVVPKVVLERSATVVEFNPANEPEKSDHNH
LAVGNQDGPGLEKRAGSAISVISNTVEELEEAHQKCPSWWYKFAHMFLVWNCCPLWLKLK
EFVKLVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEMVLK
LIALDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNM
LIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYIECVCKISLDCTLPRWHMHDFF
HSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFSAD
SLAASDDDGEMNNLQIAIGRITRGIDFVKTSVLMLLRRLWKGKKVAPEEEQEPNKRDNSV
LNHVDTGQEPKSEYLDGVTGKEYFFMDDLDHMNFINNPNLTVQVPIASEESDLYEETSTQ
SDTEDAKNPLSSDNASSLCSTVDYKPPPPVEEEEAEEAEDSKEPEECFTEACVKRFPCLY
VDITSDRGKIWWNIRKTCFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIRTILE
YADKVFSYIFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLVSLTANWLGYSELGAIK
SLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY
YRCVNTTTGELFDISVVNNKSDCMALLNTNEVRWVNVKVNFDNVGLGYLSLLQVATFKGW
MDIMYAAVDSREIEEQPMYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFG
GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKFQGMVFDFVTKQVFDITIMILICLN
MVTMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRYYYFTIGWNIFDFVVVIL
SILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIG
LLLFLVMFIYSIFGMSNFGYVKKEAGIDDIFNFETFGNSIICLFQITTSAGWDGLLSPIL
NSGPPDCDPDLENPGTSVKGNCGNPSIGIFFFCSYIIISFLIVVNMYIAIILENFNVATE
ESSEPLCEDDFEMFYETWEKFDPDATQFIEYSALSDFVDTLQEPLKIPKPNKIKLITMDL
PMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTLKRKH
EEVCATKIQRAFRRYLLRRSVKQASYMYRHSKDEDALREDAPEKEGLIATKMHEMYGNSG
TEAETAPAFGLAPVPSSETRDGPGEAKAWDKERVVKESLV
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgtgccgcacatcccgggccccgagaacctccgccccttcacccccgcctcg
ctggccgccatcgagcagcgcatcgccgaggcagaggcactcaaggtgaagcggcagcaa
gtggaactgcccgaggaagaggagatcaagcccagcagcgacctggaagctggcaagaac
ctgcccctcatctatggcgacccaccactggagctcattgggacccccctggaggacctg
gaccctttctacaaggataagaagacattcatagtcctcaacaaagggaagtccatcttc
cgcttctcggcaacccctgccctctacctgctggggcccttccaccccatccgcagagga
gccatcaaagtgcttatccattcattattcagcatgttcatcatgatcacaattttaacc
aactgcgtgtttatgacaatgagcaaccccccagtgtggtccaagaacgtggaatacacc
ttcaccgggatatacaccttcgagtccctcatcaagatactgtcgagaggcttctgcatc
gacaacttcacattcctgcgcgacccgtggaattggctggacttcatggtcatctccatg
gcctacatcactgagtttgtggacctggggaacatctctgctctcagaaccttccgcgtc
ctccgtgccttgaaaaccatcaccgtgataccagggctgaagacgatcgtcggggctctg
atccagtcggtgaagaagctctcagacgtcatgatcctcaccgtcttctgcctgagcgtg
tttgccctcatcggtctccagctcttcatggggaacctccggcagaagtgcgtgcggtgg
ccccccctcaacgacaccctgctgggggacttcgggctggacaacgacaccttggccaac
gtaacgctctatggcaacttcaccgacgacattgccggcaacttcactggcaacttcacc
agcaacagcacctttgatttcgaagcctacatcaatgatgaagccaatttctactttctg
gagggagcgctcgacgccctgctctgtgggaacagcagtgatgctgggaagtgccctgaa
ggttaccagtgcatgaaggcggggaggaatccaaactacggctacaccagctacgacacc
ttcagctgggctttcctggccctcttccgcctgatgacgcaggactattgggagaacctg
ttccagctgacactgcgtgcagcggggaaaacatacatgatcttcttcgtggtggttata
tttcttggttccttctacctcatcaacctcatccttgcggtggtggccatggcttacgca
gaacaaaacgacgctacgatgctggaggagcagcagaaggaggaggaattccagcagctc
atggagcagctgaagaagcatcaagaggagcaagagaagatgttgcaggagcggcagtcc
agcagcggttccctgcccagcagcacggccgggaaggagcgcgactcggagctgaacagc
gaccaggacaaagcaaaggactgcaacgggcaagtggtccccaaggtcgtgctggagcgg
tcggctacggtggttgagttcaacccagccaatgagccagagaaatcggaccacaaccac
cttgccgtgggcaaccaagatgggccaggccttgagaagagagcagggagtgccatcagt
gtcatctccaacacggtggaagagctggaagaagctcaccagaagtgcccgtcttggtgg
tacaaatttgcccacatgttcctggtctggaactgctgtcctttgtggttgaagctgaag
gagtttgtcaagctggtggtaatggatcccttcgtggacctgggcatcaccatctgcatt
gtgcttaacacactcttcatggccatggagcattaccccatgacagaggagttcgagaac
gtgctgaccgtggggaacctggtctttacagggatcttcacagcagagatggtcctgaag
ctcatagctttggacccctatgagtatttccagcagggctggaacatctttgacagcatc
atcgtcaccttgagcctggtggagttgggcctggccaacgtgcaagggctctccgtgctc
cgctccttccgcttgctgagggttttcaagctcgccaagtcctggcccaccctcaacatg
ctcatcaagatcatcggtaactcagtgggcgccctggggaacctcacactggtgctggcc
atcatcgtcttcatcttcgccgtggtggggatgcagctttttgggaagagctacatagag
tgcgtgtgcaagatctccctcgactgcaccctgccccgctggcacatgcatgacttcttc
cactccttcctcattgtcttccgcatcctctgcggggagtggattgagaccatgtgggac
tgcatggaggtggccggccagaccatgtgcctcatcgtcttcatgatggtcatggtcatt
gggaaccttgtggtgctgaacctgttcttagctttgctgttgagctccttcagcgccgat
agcctggcggcatctgacgatgatggagagatgaacaatttgcagatcgctattggcagg
atcacgagggggatcgactttgtaaagacctctgtcctcatgctgctccgcaggctgtgg
aaggggaagaaggtggccccggaggaagagcaagagcccaataagagggacaactctgtg
ctaaaccacgtggacactggccaggagcccaagtcggagtacctggacggagtcactggc
aaagagtacttttttatggatgacctggaccacatgaatttcattaacaaccccaacttg
acagtgcaagtccccatcgcctcggaggagtctgacctctacgaggagacgagcacccag
tctgacacggaagatgccaagaatcccctttccagcgacaacgcctcgtccctgtgcagc
accgtggattacaagcccccaccgccggtggaggaggaggaggcagaggaggctgaggac
agcaaggagcccgaggagtgcttcactgaagcctgtgtgaagaggtttccctgcctctac
gtggacatcaccagcgacagagggaagatatggtggaacatccggaaaacctgcttccgc
atcgtggagcacgactggtttgagaccttcattgtcttcatgatcctgctaagcagtggg
gcgctggcttttgaggacatctacattgaacaacgaaaggtgatacgcaccatcctggag
tacgccgacaaggtcttctcctacatctttgtcattgagatgttgctcaagtgggtggcc
tacggcttcaaggtgtacttcaccaacgcgtggtgctggctggatttcctcatcgtcgat
gtttcccttgtcagcctgacagcgaactggctgggatactccgagctgggtgccatcaag
tccctgcggacactgagggctctgagaccactgcgtgccctgtccagatttgaaggcatg
agggtggtggtgaacgccttgctgggcgccatcccctccatcatgaacgtcctgctggtc
tgcctcatcttctggctgatattcagcattatgggggtgaacctctttgcagggaagtac
taccgatgcgtcaacaccaccacaggggaactcttcgacatcagcgtggtgaacaacaag
agcgactgcatggccctcctcaacaccaatgaggtcagatgggtcaacgtcaaggtcaac
ttcgacaacgtgggcttgggatacctctccttgctgcaggtggcaaccttcaaaggctgg
atggacatcatgtatgccgctgtggactcacgcgagattgaagagcagccaatgtacgag
atcaacctctatatgtacatctactttgtcatcttcatcatcttcggtgccttcttcacc
ctgaacctctttattggcgtcatcattgacaacttcaaccagcagaagaaaaagtttgga
ggcaaagacatcttcatgacagaagagcagaagaaatactataatgccatgaagaaactc
ggctccaagaaaccccagaagcccatccccaggccatcgaacaagtttcaagggatggtg
tttgactttgttaccaagcaagtgtttgacataaccatcatgatcctgatttgtcttaac
atggtgaccatgatggtcgaaacagacgatcaaagtgaactcaaaacctctgtcctctac
aagatcaatctggtcttcatcgtcatcttcactggagaatgtgtgctcaaaatgtttgcc
ttgcgctactactacttcactattggctggaacatctttgactttgtggtggtcatcctc
tccatcttaggtattgtcctctcggacatcatagagaagtacttcgtatcacccaccctc
ttcagggtcatcaggctggcaaggattggccgtgtcctccggctgatccgaggggcgaaa
ggcattcggactctcctctttgctctgatgatgtcgctgcctgccctcttcaacatcggc
ctcctgcttttcctcgtcatgttcatatactccatcttcgggatgtccaactttggctat
gtaaagaaggaagcagggatcgatgacatcttcaactttgaaacttttgggaacagcatc
atctgccttttccagatcaccacgtcagctggatgggacggcctcctcagtcccatcttg
aacagcggcccccccgactgcgaccctgacctggaaaaccctggcacttcggtaaaaggg
aactgtggcaatccatccatcggcatcttcttcttctgcagctacatcatcatttccttt
ctcattgtggtgaacatgtacatcgccatcatcctggagaacttcaacgtggccacggag
gagagcagcgaacccctctgtgaagacgattttgaaatgttttatgaaacctgggaaaag
tttgacccggatgccacccaattcattgagtacagcgccttatctgactttgtagacacc
ttacaggagccactcaaaattcccaaaccaaacaagatcaagctaatcaccatggatcta
ccaatggttgccggggacaaaatccactgtctggatatcctctttgcactaactaaggaa
gtgctgggagactcgggagagatggatgccttgaaggccaccatggaggagaagttcatg
gctgcaaacccctcgaaggtttcctatgaacccatcaccaccactctgaaaaggaaacat
gaggaagtctgtgcaaccaaaatccagagggctttccggaggtacctcctgaggcgctcg
gtgaagcaggcgtcctacatgtacaggcacagtaaggacgaggatgccctgagagaggac
gcgcccgagaaggaaggtctgattgccaccaaaatgcacgagatgtatgggaacagtggg
acggaggcggagacagcccctgcctttggtcttgcacccgttcccagctcagagactcga
gacggtcccggcgaagcgaaagcgtgggataaggaacgcgttgtgaaagagtcactggta
taa
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