Tessaracoccus flavescens: BW733_14095
Help
Entry
BW733_14095 CDS
T04703
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
tfa
Tessaracoccus flavescens
Pathway
tfa03030
DNA replication
tfa03410
Base excision repair
tfa03420
Nucleotide excision repair
tfa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BW733_14095
03410 Base excision repair
BW733_14095
03420 Nucleotide excision repair
BW733_14095
03430 Mismatch repair
BW733_14095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfa03032
]
BW733_14095
03400 DNA repair and recombination proteins [BR:
tfa03400
]
BW733_14095
Enzymes [BR:
tfa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BW733_14095
DNA replication proteins [BR:
tfa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BW733_14095
DNA repair and recombination proteins [BR:
tfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BW733_14095
NER (nucleotide excision repair)
GGR (global genome repair) factors
BW733_14095
MMR (mismatch excision repair)
DNA ligase
BW733_14095
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BW733_14095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
HHH
Nlig-Ia
PTCB-BRCT
DUF7575
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AQP51787
UniProt:
A0A1Q2D090
LinkDB
All DBs
Position
2882334..2884433
Genome browser
AA seq
699 aa
AA seq
DB search
MTEQTDAEKGVTSPELRRRWTELNTLLTEAQEAYYGVDSPTLSDADYDLAMRELEALEAD
HPSLVNPDSVTQKVGAARITEFTPVTHRRRMLSLDNVFSEEELSGWLARTPTSRYLCELK
IDGLAVDLVYLNGRLSVAATRGDGRVGEDVTPNVSTIRTIPHRLTGDVPEVLEVRGEVFF
PVAEFEELNASLVEAGKAPFANPRNAAAGSLRQKNPSVTASRPLRMLVHGIGEIDGVSFE
SQSEAYEMLKGWGLPTPDTFRVVETPQEVLAFVEHHGERRHDLSHEIDGIVIKVDNLAEQ
DRLGSTSRAPRWAIAYKYPPEEVNTVLRDIQVNVGRTGRVTPFGVMEPVFVSGSTVEMAT
LHNGYEVKRKGVLIGDTVVLRKAGDVIPEIVAPVVALRDGTEREFVMPTHCPSCGTELRP
EKEGDKDIRCPNSRTCPSQLRERLFGLASRGALDIEALGWEGAAALLESGRLADEGDLFS
LTADDLLQTDFYTRTAKPAELAGASVPIRDGRVLSTVGQKLLSNLESVKSQPLWRVLVAL
SIRHVGPTAARSLATHFGSLDAIRAASPEELAAVDGVGSVIAEAVLNWFTVDWHRDIVEK
WAASGVRMADEIDTSIERTLEGLTVVVTGSLDGFSRDGAKEAIISRGGKASGSVSKNTDY
VVIGANAGSKAKKAESLGLTVLDEAGFVTLLSEGPAGLE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcagaccgatgccgagaaaggcgtcacctcacctgagctccgccgacgctgg
accgagctcaacacgctgctgacggaggcccaggaggcctactacggtgtcgattcgccg
acgctttccgatgccgactacgacttggcgatgcgcgaactcgaggcgctcgaggcagac
cacccctcgctggtcaaccccgattccgtcacccagaaggtcggcgcggcccggatcacg
gagttcactccggtcacccaccggcgacggatgctcagcctcgacaacgtcttcagcgag
gaggagctctccggctggctggccaggaccccgaccagccgctacctgtgcgagctgaag
atcgacgggctcgcggtcgatctcgtgtacctgaacggacgactgagcgtcgcggcaacc
cgcggtgacggccgggtcggcgaggacgtcacgcccaacgtgtcgacgatcaggaccatc
ccgcaccggctcaccggggacgtgcccgaggtgttggaggtccgcggcgaggtcttcttc
ccggtcgccgagttcgaggaactcaacgcctcgctcgtggaggcggggaaggcgccattc
gcgaacccgcgcaacgcggcggccggatcgctgcgccagaagaacccctcggtgacggcg
tcgcgcccgctgcggatgctcgtgcacggcatcggcgagatcgacggggtgagcttcgag
tcccagtccgaggcgtacgagatgttgaagggctgggggcttcccacgcccgacacgttc
cgggtcgtggagaccccgcaggaggtgctcgccttcgtggaacaccacggcgagcgccgc
cacgacctgagccacgagatcgacggcatcgtgatcaaggtcgacaacctggccgagcag
gaccggctcgggtccacctcccgtgctccgcgctgggccatcgcctacaagtacccgccc
gaggaggtcaacaccgtcctgcgcgacatccaggtcaacgtcggacgcaccgggcgggtc
accccgttcggcgtgatggagcccgtcttcgtcagcggctccaccgtcgagatggcgacg
ctgcacaacggctacgaggtcaagcgcaagggcgtgctgatcggcgacaccgtcgtgctg
cggaaggccggagacgtgatccccgagatcgtcgccccggtggtcgccctgcgtgacggc
accgaacgcgagttcgtgatgccgacccactgcccctcctgcgggacggagcttcgaccg
gagaaggagggggacaaggacatccgctgccccaactcgcggacctgtcccagccagttg
cgcgagcggctgttcgggctcgcctcccggggagccctcgacatcgaggccctcggctgg
gagggcgcggcagccctgcttgagtcggggcgcctggcggacgagggcgacctgttctcg
cttaccgccgacgacctgctgcagaccgacttctacacccgcaccgccaagccggccgaa
ctggccggggccagcgtcccgatccgggacgggcgcgtgctgtccacggtcggccagaag
ctgctgtcgaacctggagagcgtcaagagccagcccctgtggcgcgtgctggtcgccctg
tcgatccgccatgtcggcccgacggctgcccgctcgctcgccacccacttcgggtcgctg
gacgccatccgggccgcctcgcccgaggagcttgccgccgtcgacggcgtcggctcggtg
atcgcggaggcggtgctgaactggttcacggtcgactggcaccgcgacatcgtcgagaag
tgggcggcatcaggggtgcggatggccgacgagatcgacacctcgatcgagcgcaccctc
gaggggttgaccgtcgtggtcaccggctccctcgacgggttcagtcgcgacggcgcgaag
gaggccatcatctcgcgcggggggaaggcgtccggctcggtgtcgaagaacaccgactac
gtggtgatcggcgccaacgccggttccaaggcgaagaaggcggagagcctgggactcacc
gtccttgacgaggccggattcgtcacgctcttgtccgaggggccggcagggctggaatag
DBGET
integrated database retrieval system
