Tachysurus fulvidraco (yellow catfish): 113634924
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Entry
113634924 CDS
T08119
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04110
Cell cycle
tfd04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
113634924 (rb1)
04218 Cellular senescence
113634924 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tfd01009
]
113634924 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113634924 (rb1)
Protein phosphatases and associated proteins [BR:
tfd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113634924 (rb1)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
113634924 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
Motif
Other DBs
NCBI-GeneID:
113634924
NCBI-ProteinID:
XP_026989918
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All DBs
Position
21:8667904..8692444
Genome browser
AA seq
894 aa
AA seq
DB search
MPPKKRSSGSGTPTSRESKCSNRKENSVLSPEKHKDKHPEFVTLCKDLSVSNSLCCQAWA
MWESITPDEIIESNKQLWGACVYVSAVDLDEIRFTFTEFQKAVGLSVKQFLTLMRKLDEN
LDTISHKVNSAVTRLAKKYEVSLALYQRFVKTCAKIYGVPDEVKGQELLRCNWTLFLLAK
GSVLQMEDDLVIAFQLLLCVLEFYIKRCPSSLLQPLYKSAISETTQSPPTRTSRRNKAKP
RPLEMDVQLLETLCKESDCSIDEVKNVYQSSFCAFLDSMGFSGLQELPAVETLSKSYEEL
YHKSKDFDARLFLDNDETLSPVKAEVTKVEMTPRKNPPGEENVSIPPQTPIRAAMYSIQQ
LRGELTSISDQPSGILMNYFENCTVNPSEDITKRVEHLGQVFSQKFAQAVGQCCEGLGKK
RFTLGVQLYYKVMESMLKSEEKRLSVQNFSKLLNNATFHTSLLACSLEVVLATYVGCSLK
NGGSKSPETNLCFPWILDVFQLHAFDFYKVIESFIKELTLKHDMLEHLSRCENQIMESIA
WKSDSLLFELLRQSREDGPGEQAEPPATLNQPLQHDHTAADLYLSPQRQSRRFAAAEVEV
PVIAPSQLPASGNRQHRSNSLSLFYKKLYRMAYLRLKTLFSELLTAHPELEAIIWTLLQH
TLQNEYELMKDRHLDQLMMSAMYAICKVKNVDLRFKTIVTAYKALSNTNQETFKRVLIRD
GQYDSIIVFYNQVFMQKLKTNILQYASTRPPPLSPIPHIPRSPYMYPSSPLRVPGGNVYI
SPLKSNRLTTAAMTPRTKFLVSIGESFGSSDKFQKINQMVNSTDRALKRSLAGDPNLKPH
KRLRFDVDGQDEADGSKSTGESTLDKKLAEMRSVRNRMQEQKMKEEAEKEDPEP
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaaaaagcgtagcagcggctccgggacaccaacaagcagagagtcgaaatgc
agcaacaggaaagaaaactcggtgctttctccggaaaagcacaaagataagcatccagag
tttgtaaccctttgtaaggacctctctgtctccaactcgctgtgttgtcaggcatgggcg
atgtgggagtcgattaccccagacgaaatcattgaatcaaacaagcaactctggggagca
tgcgtgtacgtctcagctgtggacttggacgaaatccggttcacctttacagaatttcag
aaggctgtcggtttgagtgtgaagcaatttctcacccttatgcgaaagctggatgaaaat
ctggacacaataagccataaagtaaattcagcagtgacgaggctggcaaagaaatacgag
gtgtccctggctctttatcagagatttgtgaaaacatgtgcaaaaatctacggtgtgcct
gatgaagttaagggacaagaacttttacgctgtaactggaccctattcctcttggctaaa
ggaagtgttctgcagatggaggatgacctggtgatagccttccagttacttttgtgcgtt
ctggagttctacatcaagcgatgtccctcttctctcctccagcctctttacaagtcggca
atcagcgagacaacacagagtccgccgactcggacctcgaggcggaacaaagccaagcct
cgtcctttagagatggacgtgcagctgctggagacactgtgtaaggagagcgactgcagc
atagacgaggtgaaaaatgtctaccaaagcagtttttgtgcctttctggactctatgggc
ttttcaggattgcaggagcttccagcggtggaaactctatccaaaagttatgaagagctc
taccataaaagcaaggattttgacgcacgactgttcttggacaacgatgagaccctcagc
ccagttaaagcagaagttacaaaagtagaaatgactcctagaaagaatccacctggagag
gaaaatgtctctattccaccacagaccccaatcagagctgcaatgtattctatccagcag
ctaaggggtgaacttacctcaatcagtgaccaaccttcaggcattctcatgaattacttc
gagaactgcactgtgaacccatcagaagacatcacaaagcgggtcgaacatctcggtcag
gtcttcagccagaaatttgctcaagctgttggacagtgctgtgaaggattgggcaaaaag
agatttactctaggtgtccagctttactacaaagtcatggagtcgatgctcaagtctgaa
gagaagcgactctccgtgcaaaatttcagtaaactactgaacaatgctactttccacacc
tcactccttgcctgttcactggaagtcgtcctagcaacttatgttggatgttccctgaag
aacggtggcagcaaatcacctgaaacaaacctgtgcttcccctggatcttggatgtcttc
cagcttcatgcctttgacttttacaaagtgatagaaagtttcatcaaagagctcactctg
aagcatgacatgctcgaacacttgagccgctgcgagaatcagatcatggagagcattgca
tggaaatcagattctctcctgttcgagctcctgaggcagtctcgtgaggatggtcccgga
gagcaagcggagcctcctgcgacactaaaccagcccctgcagcacgatcacacagcagct
gatctatatctatctcctcagcgccagagtcgccgattcgcagcagcggaggtggaggtt
cctgtcatagccccgtcacagctccctgcctcaggcaacagacagcatcgctcaaactcc
ctcagcctcttctataagaaattgtatagaatggcctacctgcgactgaaaacacttttc
tctgagcttctaactgctcaccccgagctggaggccatcatatggactctactccagcac
acactccagaacgagtatgagctaatgaaggaccgacaccttgaccagctgatgatgtct
gccatgtatgccatatgcaaggtgaaaaatgtggatttgcgcttcaagacaatcgtcact
gcatacaaagcgctttccaacacaaaccaagagacgttcaagcgcgtgttgatcagagac
ggccaatacgattccatcatcgtcttctacaaccaggtgtttatgcagaagttgaagaca
aacatcctgcagtacgcttctactcggcctcctcccctgtctcctattccacatattccc
cggagcccgtacatgtatcccagctcccccctcagagtgcctggtgggaatgtctacatc
tcccctttaaagagcaatcgtctgaccacagcagccatgacgccacggaccaagttcctt
gtatccattggagagtcgtttgggtcctcagacaagttccagaagatcaatcagatggtc
aatagcacagacagggccctgaagaggagtctagctggagaccccaatctcaaaccccac
aagcgattacgctttgatgtggatggacaggatgaagctgatggaagtaaatcaactggg
gagtctacactggacaagaagctggctgagatgcgttcagttcgcaaccgcatgcaggaa
cagaaaatgaaggaggaggctgagaaggaagacccagagccctaa
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