Tachysurus fulvidraco (yellow catfish): 113635687
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Entry
113635687 CDS
T08119
Symbol
cd40lg
Name
(RefSeq) CD40 ligand
KO
K03161
tumor necrosis factor ligand superfamily member 5
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04060
Cytokine-cytokine receptor interaction
tfd04514
Cell adhesion molecules
tfd04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
113635687 (cd40lg)
04514 Cell adhesion molecules
113635687 (cd40lg)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
113635687 (cd40lg)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tfd04052
]
113635687 (cd40lg)
04090 CD molecules [BR:
tfd04090
]
113635687 (cd40lg)
Cytokines and neuropeptides [BR:
tfd04052
]
Cytokines
Tumor necrosis fators
113635687 (cd40lg)
CD molecules [BR:
tfd04090
]
Proteins
113635687 (cd40lg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
DUF4381
Motif
Other DBs
NCBI-GeneID:
113635687
NCBI-ProteinID:
XP_026991057
LinkDB
All DBs
Position
17:complement(13345958..13350029)
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AA seq
342 aa
AA seq
DB search
MGKTENTTTTTTTTKKSLSQPKSVCEKKTHETHKSCSSLFESFRASRKLLSDVELCWWRP
FFRPVWVDLVFTSRNLLPANMSTMINTFHSSFNPPPVPPRPGHRGGPALPSNTPLVKFIS
VLLLLLMILTFGGFLYLFHRISTLQDRRTDNEINALKQLQQCAENLGSENLQHCNKLVEL
YKNLLKKVSEAEGKVALLIEPDSSTNPQARLVLSKEENKFNTLVWKKTHSVLEKITLSSS
GVLTIQYPGYYLIQSQVTFSKAHEKAPLYQAIWSQKSNDETPSELLKSFCSLPRGSMMPD
LCTASETGVFRLEKGHKLFVNVTDKSLVNLDATTFGLFRLQD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaactgaaaatacaacaacaacaacaacaacaacaaaaaaatcactatcacaa
ccaaagtctgtgtgtgaaaaaaaaacacacgagacacacaaaagttgttcttccctattt
gagtctttcagagcttccaggaagttgctttcagatgtagagttgtgttggtggaggcca
ttcttcagacctgtatgggtggatctggtgttcacgtcgcggaacctgctgcctgcaaat
atgtccacaatgataaacacctttcatagcagcttcaatcctccgccggttcctccacgg
ccaggccaccgaggaggtccagcgctgccatcaaacacaccgttagtcaagttcatatcg
gtgctgctgcttctgttaatgatactgacgtttggagggtttctctacctgttccataga
atcagcacgctgcaggacagacgcactgataacgagataaacgcactaaaacaactacag
cagtgtgctgagaacctaggatctgagaatttacagcactgcaacaagctcgtggaactc
tataaaaatctcctaaaaaaggtctctgaagctgaaggaaaagtggctttgttgattgaa
cctgattcctccaccaatcctcaagcaaggttggtgttaagtaaagaggagaacaaattc
aataccctggtatggaagaaaacccactctgtgctggagaagatcaccctcagctcatca
ggagtcctgaccattcagtaccctggatattacttgatccagtcgcaagtcaccttttca
aaagcacatgaaaaagcaccactctatcaagccatatggtcccaaaagtcaaatgacgaa
accccaagtgaactgctcaagtccttttgcagcttgcctcggggcagtatgatgcctgat
ctgtgcactgcctcagagacaggggtgttcagacttgagaagggtcacaaactatttgtt
aatgtaactgacaagagcttagtgaacctggacgctaccacttttggattgttcaggcta
caggactga
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