Tachysurus fulvidraco (yellow catfish): 113636089
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Entry
113636089 CDS
T08119
Symbol
tdg.1
Name
(RefSeq) thymine DNA glycosylase, tandem duplicate 1 isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113636089 (tdg.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113636089 (tdg.1)
Enzymes [BR:
tfd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
113636089 (tdg.1)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
113636089 (tdg.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
113636089
NCBI-ProteinID:
XP_026991794
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All DBs
Position
17:complement(20233791..20241060)
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AA seq
430 aa
AA seq
DB search
MDERSYGSLPHVPSDYVQHWVQSAQQHLQALHAQYSHMANGNVAHFMEGHGEEPGMMEMP
VQMPHSAALEPGPPQKAPTKGKRGRPASKEPKAKPGPKPKKAKAVKEGQPAEGTQEKIDE
SFKKVKRKIDRFKGMSEEEVMKRTLPDILTENLDYVIVGINPGLMAAYIGRWFPGPGNHF
WKCLFLSGFTDQLLNHMHDQSLPEKYGIGFTNMVARATPGSKDLSSKELREGGKILVEKI
KKFKPLIVVFNGKCIYEMFCREIFGKKPKSLEFGVQPLKIPDSDTALYLMPSSSARCAQF
PRAQDKVHFYIKLRELRDQLKGVAKPKEVEEINYSFDLGLAKEDAKRMAIKEENYDPGYE
AAYGGAYGEPGTEEANGHCAFTSGEAEAAAKEPRNQNAVGQIPDGKWMTNSFADQIPEIG
SSSQAQAEAV
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagaagttacggatctttgcctcatgtgccctcggattatgttcagcattgg
gttcagtcagcacagcagcatctccaagccctccacgcacaatattctcatatggctaac
ggtaatgttgcacacttcatggaaggacacggagaagaacctggaatgatggaaatgcct
gttcagatgccgcattctgcagcactggagcctggccctccccagaaagctcccactaaa
ggaaagcggggcagacctgcaagcaaagagcctaaagcaaaaccaggccccaagccaaag
aaggccaaggcggtaaaagagggccaaccagctgaaggaacccaggagaagattgatgag
tccttcaagaaagttaaaaggaaaatcgatcgcttcaagggcatgtccgaggaggaagtc
atgaaaaggactctgccagacatccttacagaaaacctggactatgtcattgttggaatc
aatccaggtctgatggctgcctacattggacgatggttccctggacccgggaaccatttt
tggaagtgcctgttcctatccggattcactgaccagctgctgaaccacatgcacgatcag
tctctccctgagaaatacggcattggcttcactaacatggtggcgagagcaacaccagga
agcaaagatctctcaagtaaagagcttcgagaaggtggcaagattttagtggagaagatt
aaaaagttcaaacctctcatagttgttttcaatgggaaatgtatatatgaaatgttctgt
agagagatatttggcaaaaagcccaaatctctggaatttggcgtacagccactcaagatt
cctgactcagacacggcgctgtatctgatgccctcctcgagtgcccgctgtgcccagttc
cctcgagctcaggacaaagtgcacttctatatcaaactccgagaactccgagaccaactg
aagggtgtggccaaacccaaggaagtcgaggaaatcaattactcattcgatcttggcttg
gctaaagaggatgctaagagaatggccattaaggaggagaattatgatcctggctatgag
gctgcatatggaggtgcatacggggaaccaggaaccgaggaagccaacggccactgtgcc
tttacttctggagaagcagaagcagcagcgaaggagcccaggaatcagaatgcagtgggg
cagattccagacggaaagtggatgaccaactccttcgccgatcagattcctgagatcggc
agctcctcacaagcccaagcagaggctgtatga
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