Tachysurus fulvidraco (yellow catfish): 113636662 Help Entry 113636662         CDS       T08119                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism tfd  Tachysurus fulvidraco (yellow catfish) Pathway tfd04010   MAPK signaling pathway tfd04120   Ubiquitin mediated proteolysis tfd04140   Autophagy - animal tfd04144   Endocytosis tfd04620   Toll-like receptor signaling pathway tfd04621   NOD-like receptor signaling pathway tfd04622   RIG-I-like receptor signaling pathway tfd05132   Salmonella infection tfd05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:tfd00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     113636662 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     113636662 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     113636662 (traf6)    04140 Autophagy - animal     113636662 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     113636662 (traf6)    04621 NOD-like receptor signaling pathway     113636662 (traf6)    04622 RIG-I-like receptor signaling pathway     113636662 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     113636662 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     113636662 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tfd04131]     113636662 (traf6)    04121 Ubiquitin system [BR:tfd04121]     113636662 (traf6) Enzymes [BR:tfd01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      113636662 (traf6) Membrane trafficking [BR:tfd04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     113636662 (traf6) Ubiquitin system [BR:tfd04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     113636662 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4 zf-C3HC4_2 TRAF6_Z2 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 zf-RING_5 TRAF3_RING Sina_ZnF DM U-box RING_XB3-XBAT31 SlyX Spc29 CAGE1 DUF4472 DUF7310 zf-RING_11 ATG16 DUF3450 ACBP4_C zf-TRAF_2 CCDC113_CCDC96_CC Motif Other DBs NCBI-GeneID:  113636662 NCBI-ProteinID:  XP_026992699 LinkDB All DBs Position 1:complement(8949031..8956291) Genome browser AA seq 538 aa AA seqDB search MASCSDMHKSNPDEYPSSRCMADMEKESYLSPTDSPSTISVSSNIQEQQGYDVEFDPPLE SKYECPICLMGLRSAVQTPCGHRFCNSCIKKSIRDTGQKCPVDNEVLTEDQLFPDNFAKR EILSLTVRCRNVGCSDIMELRHLENHLKLCKFATVPCPQCQRPVWKNSIEDHMNQDCLQR LITCPDCAEGIIYADKQFHEQMCPFVNTVCEYCGMDLIRGQLSSHCATDCLKAPVACTFN IFGCQEKMPRNNLALHMQEFTQMHMRFMADFLRNQSVNGILPAPKCGPSCSPPSEHGASS RVGEPCQCSQDMQQLRETVVELEGRLVRQDHQLRELSIRNDTQHTQITELRKKLASLEEK MHELEAQQYQGVYVWRLEGFSAHLQQQEAGQPVVLHSPPFYTGKPGYKLCLRLHLQTPSA PRCSNYISLFVHTMQGEFDSQLPWPLQGNIRLSVLDQAEGQHHTEIMETKPDLQAFQRPT MQRNPKGFGYVTFMQLQALRQRGFVRDDVLLVRCEVMPRFDTSLRREGMQPRGPEPSL NT seq 1617 nt NT seq  +upstreamnt  +downstreamnt atggcatcatgtagtgacatgcacaaatccaatccagatgagtatccatcatccagatgt atggctgatatggagaaggagtcgtatctaagccctacagatagcccatctacaattagt gtctcatccaacatccaggaacagcaaggctatgatgttgaatttgatcccccactggag agcaagtatgaatgtcccatctgcctgatgggtctacggtcagctgtgcagacaccatgt ggtcatcgcttctgtaacagttgtattaaaaaatccatcagggacacggggcaaaaatgt ccagttgacaatgaggtgctgacagaggaccagctttttccagataactttgccaagagg gaaatcctgtctcttactgtacgctgccgcaatgttggctgtagtgacataatggagctc aggcacctggagaatcacttgaagctatgtaaatttgctacagtgccttgtccccagtgt cagaggcctgtatggaagaatagtatagaggaccatatgaatcaggactgtttacagcgt ctgatcacatgccctgactgtgcagagggtatcatctatgctgacaaacagtttcatgag cagatgtgtccctttgtgaatacagtgtgtgagtactgtggaatggatttaattcggggt cagttgtcgtcacactgtgccacagactgcctgaaagctcctgttgcctgtacgttcaac atatttggctgtcaagaaaagatgccgaggaacaacctggcccttcacatgcaggagttt acacagatgcacatgcgtttcatggctgacttcctgaggaatcagagtgtgaatggcatt ctccccgctccaaaatgtggcccttcatgttcacccccatccgaacatggtgccagttcc agggtgggagagccatgtcagtgcagccaggacatgcagcagttacgtgagactgttgtg gaacttgagggccgcctcgtgcgccaggaccaccagttacgggagctgagcattcgcaat gatacacagcatacacagataacggagctacgcaagaagctggcatcgctggaagagaaa atgcacgagctggaagctcagcagtaccagggtgtttatgtatggcgattagagggattc tcagctcacctgcaacaacaagaagcaggacaaccagtagtgctccatagcccaccattc tacacaggaaagccagggtataagctgtgcctgcgactgcaccttcagacacccagcgcg ccacgttgctctaactatatctcattgtttgtgcatactatgcaaggagaatttgacagc cagctaccgtggccccttcagggcaacatccgattgtctgtgctggaccaggctgagggc caacaccacactgagataatggaaaccaaaccagaccttcaggccttccaaaggcccact atgcagcgcaaccccaaaggcttcggctatgtcacattcatgcagttgcaggcattgcgc cagcgtggttttgttagggatgatgtgctgctagtgcgctgtgaggtcatgcctcgcttt gacacaagccttagaagagagggcatgcaacctcgaggacctgaaccatctctctga

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