Tachysurus fulvidraco (yellow catfish): 113641349
Help
Entry
113641349 CDS
T08119
Symbol
chrna11
Name
(RefSeq) cholinergic receptor, nicotinic, alpha 11 isoform X2
KO
K04809
nicotinic acetylcholine receptor alpha-7
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04020
Calcium signaling pathway
tfd04080
Neuroactive ligand-receptor interaction
tfd04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113641349 (chrna11)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113641349 (chrna11)
04082 Neuroactive ligand signaling
113641349 (chrna11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113641349 (chrna11)
Ion channels [BR:
tfd04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
113641349 (chrna11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF5665
Motif
Other DBs
NCBI-GeneID:
113641349
NCBI-ProteinID:
XP_026999830
LinkDB
All DBs
Position
7:complement(12672365..12714180)
Genome browser
AA seq
537 aa
AA seq
DB search
MERPVANDSQPLTVVLTLSLVQIMDVDEKNQVLTTNIWLNMHWYDYYLQWNQSEYPGVKN
LRFTTDQVWTPDILLYNSADDDFDSTFKTNVLVNSSGYCTYLPPGIFMSTCNVDVRWFPF
DIQKCEMKFGSWTFDGWLLDLQMTDADISGYMPNGEWDLVGVPGTRNEVFYDCCKEPYPD
VTFVITIRRRTLYYALNLLIPCVLLSSMTLLIFVLPADSGEKISLGITVLLSLTVFMLLV
AEIMPATSDSIPLIGQYFASIMIIVGMSVIATVIVLQYHHHDPNGGNMPKWVQLVLLQWV
AWFLRMKRPGECEDPERPPCAPHLRRCSSGSHTGSLPNMVDQHHHMPTTLHPLHPQSLLQ
AAGHANHLPPQCNSANNNGSLLYTGFPSLDEASPPPLLADSAPRNSISAGVIRPGSSSPP
PHLPSHYSSPPPPPTPNLDAPGCPSTVSGGAGGCSCSAASGSGGDPQLQAILDEVRYIAE
RFRAQDENDSVAEQWKFAGAVIDRLCLVAFSVFNIICTISILMSAPNFVEAVSKDFI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggagcggccagtagccaatgattcccagcctctcacagttgtccttactctcagcttg
gtgcagatcatggatgtggatgaaaaaaatcaggttctcaccaccaatatttggcttaac
atgcattggtatgattattatctacagtggaaccaatcagaatatccaggagtgaaaaat
cttcgattcaccactgaccaagtttggaccccagacatcttgctttacaacagtgctgac
gatgactttgactcaacctttaagaccaacgtgctggtgaattccagtggctactgcacc
tatctgcccccaggtatcttcatgagcacctgtaatgtggatgttcgctggtttcctttc
gacatccaaaagtgtgaaatgaaatttggctcctggacatttgacggctggctgctggac
ctccagatgaccgacgctgatatttctggttacatgcctaatggagaatgggacctagtc
ggtgtccctggcacaaggaatgaggttttctatgactgctgtaaggagccgtacccagat
gtgacattcgtgataaccatccgcagacgaacactctactatgccctgaacctcctcatt
ccttgcgtactgctctcctccatgaccctcctgatctttgtgctgcctgctgactctgga
gagaagatctcactgggtattacagttctgctatcactaacagtctttatgttactagtg
gcagaaattatgcctgccacttctgactccattccactcatagggcaatactttgctagt
ataatgatcattgttggtatgtcggtcatagcaactgtgattgttctgcaatatcatcat
cacgatccaaatgggggaaacatgcccaaatgggtccagctggttctgctccagtgggtg
gcctggtttttgcgtatgaagcgccctggtgaatgtgaagaccctgagcgtcctccatgt
gctccccatcttcgccgctgctcttcaggctcccatactggcagccttcccaacatggtt
gaccaacaccaccatatgcctaccacactacacccactccacccccagagccttttgcaa
gcagcaggccatgccaaccatctgcccccacagtgtaacagtgctaataacaatggcagc
ctgctctacactggcttcccaagcttggatgaagcctcaccacctccactgttggctgac
tctgccccaaggaatagcatatcagctggtgtaattcgaccagggtcttccagcccgcca
cctcacttgccctcacattacagcagtccacctccaccaccaacgccaaacctagatgct
cctggttgtcccagtacagtctcgggtggtgctggtggttgttcatgctcagcggccagt
ggcagtggaggagatccacagcttcaggctatcctggatgaggttcgttatattgctgag
cgtttcagagcccaggacgaaaacgacagtgtagcagagcagtggaagtttgcaggggca
gttatcgaccggctctgccttgtggccttcagtgtctttaacatcatctgcaccatctcc
atcctcatgtcagcacccaactttgtcgaagctgtttccaaggatttcatttga
DBGET
integrated database retrieval system
