Tachysurus fulvidraco (yellow catfish): 113642782
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Entry
113642782 CDS
T08119
Symbol
ptprfa
Name
(RefSeq) protein tyrosine phosphatase receptor type Fa isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04514
Cell adhesion molecules
tfd04520
Adherens junction
tfd04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113642782 (ptprfa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
113642782 (ptprfa)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
113642782 (ptprfa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tfd01009
]
113642782 (ptprfa)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfd04515
]
113642782 (ptprfa)
Enzymes [BR:
tfd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
113642782 (ptprfa)
Protein phosphatases and associated proteins [BR:
tfd01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
113642782 (ptprfa)
Cell adhesion molecules [BR:
tfd04515
]
Immunoglobulin superfamily
Type II RPTP family
113642782 (ptprfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
PTP-SAK
Tc-R-P
Interfer-bind
DSPc
V-set
Y_phosphatase3
PTPlike_phytase
C2-set_2
PTP-NADK
Ig_C17orf99
Fn3_PTPRU
Insulin_TMD
DUF7482
DUF3465
Motif
Other DBs
NCBI-GeneID:
113642782
NCBI-ProteinID:
XP_027002219
LinkDB
All DBs
Position
5:15028577..15224841
Genome browser
AA seq
1936 aa
AA seq
DB search
MVPHHTRSSRFHSAASLLLLLLGLAIHIRGDTMPSFIKSPEDQTGISGGVASFVCQAVGE
PKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSMGEINTS
AKLTVLEEDQIPHGFPTIDMGPQLKVVERTRTATILCAASGNPDPEIFWFKDFLPVDING
SNGRIKQLRSGGTPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRDQREVRR
VPPRFSIPPTNHEVMPGGSINLTCVAVGAPMPFVKWMKGEMELTKEEEMPVGRNVLELTN
IRQSANYTCVAMSSLGMIETTAQIIVKALPRPPISLIVTETTATSVTLTWDSGNPEPVSY
YVIQYRAKHSDNGGFQEVDGVASTRYSIGGLSPFSPYEFRVMAVNNVGRGLPSTSVETRT
GEQAPSSPPLKVRARMLSSSTALVQWEPPEEPNGLIRGYRVYYTHDAHSYAPLSAWYKHN
TADAAQLATISNLVPSTTYSLRVLAFTAVGDGPPSHTLQIKTLQGVPAQPSELEAEAELD
TRIMLRWLWPVQDQIIKYELTYWEADSGHKNHLTFDPAGSYAVEGLKPDTLYKFTLAARS
RMGLGLYTQPIEARTAQSTPSAPPQDVHLLSLSSTSIKVSWVAPPVASRHGNIVRYSLAY
QAPSGEDQERHEVRDIPADSTSYVLEGLEKWALYHVWVKAHTDVGPGPESSSTWIRTQED
VPGAPPRRVEVDAVNSTALHVTWKPPLVQKQHGEIRGYQVVYSRVEDGEPRGQPTILDIA
LPDAQEAYITGLQAETSYSVTVAAYTTKGDGARSKAKVVTTTGAVPGKPTMIISTTVGNT
ALIQWQPPKETFGELLGFRLQYKCQDDDDNDDKDDNDEGSFITRHFMRTDDHFTVTGLLK
GSTYSFRLSAKNRAGHGEEHIKEITTPDDIPSGYPQNLSVVGLSSTSTTLSWAPPPLVQR
NGKIVRYDIVYRDINSVKNQTNITTETRISIGGLKPDTTYDIRVRAYTKKGPGPFSPSIQ
SRTMATSVPEFAKNFGVKAATKTSVLLTWEVPETYKPQVPFKILYNQQSVEVQGDLRRKL
ITRLQPDTEYSFVLMNRGSSAGGLQQQVSIRTAPDLLDKKPSRSAHESAVGGRVTLTLPT
VTASAAARIRWYFIVVLPMSQATSSHWESPEDIDLDELLEAGGDTTVMKRKKRQSDDSLK
PYIAARLHTLPESFTLGDERYYSGFYNRPLLAQTQYRTFIMAALQEHDSKTFATSPFSDP
IMVQVQMSRHAEDPEMLWVMGPVLAVVLIIIIVIAILLFKSKQERKRASPSVKDEHTAGV
KDHLLAHSSDPVEMRRLNYQTQGSSDPSCPDTPRMREHPPISVCDLAEHIERLKANDSLR
FSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVVLSPIDAIPGSDYINANYI
DGYRKQNAYIATQGPLPETVSDFWRMLWEQRSSTIVMMTRLEEKSRVKCDQYWPSRGTET
YGMIQVTLLDTVELATYSVRTFTMYKSGSSEKREVRQFQFMVWPDHGVPEYPTPILAFMR
RVKSCNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEQTVDLYGHVTLMRSQRNYMV
QTEDQYIFIHDALLEAAVCAHTEVPARSLYSHLQKLTNTPSGETVTAMELEFKKLANSKA
HTSRFISANLPCNKFKNRLVNIMPFESSRVCLQPIRGVEGSDYINASFIDGYRQQKAYIA
TQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAE
YNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQ
DGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDLFQTIKTLRTQRPAMVQTEDQYQLC
YRAALEYLGSFDHYAT
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atggtgccacatcacacacggtcgtctcgtttccacagcgcggccagcctgctgctgctg
ctgcttggactcgctatacatatacggggagacaccatgcccagcttcattaagtctcca
gaggaccagactggcatttctggaggcgttgcatctttcgtgtgccaggcagttggcgag
cccaaaccacgtataacatggatgaagaagggcaagaaagtcagctcacagcgctttgag
gtgattgaatttgatgatggctcggggtcagtgttaaggatccagcccctgaggacgcac
cgagatgaggcaatctacgagtgcacagccactaacagcatgggggaaataaacaccagt
gccaagcttactgtcctggaagaggaccagatcccacatggtttccccactatagacatg
ggtcctcagttgaaggtggtggagaggactcgcacagccaccatactgtgtgcagcaagc
gggaatcctgaccctgaaatcttctggtttaaagattttctccctgtcgacatcaacggc
agtaatgggcgaattaaacagctgcgctcaggtggtacaccaatcagaggtgcgctgcag
atagagaacagcgaggaatcagatcagggaaaatatgagtgtgtggcaacaaacagcgcc
gggacacgatactccgctccggctaatctttatgtcagagaccagcgggaagttaggcga
gttccaccacgcttctccattccccccaccaatcatgaggtgatgcccggtggcagtatc
aacctcacatgtgtcgccgtcggcgccccaatgccttttgtcaagtggatgaagggtgaa
atggagctgaccaaagaagaagagatgcctgttggacgcaacgtgctggagctcaccaac
attcgccagtcagcaaactacacctgtgtagcgatgtcctctctgggaatgatcgagacc
acggcacagatcattgtcaaagccctccctcggcctcccatctctctaatcgtgactgaa
accacagcgaccagcgtgactctgacatgggattctgggaacccagagccggtctcatac
tatgtcattcagtaccgtgccaaacactctgataacggtggtttccaggaagtggatggc
gtggcatcgacacgctacagcattggcggtctgagtccattttctccttacgagttccgt
gtcatggctgtgaacaacgtggggcgtggcctgcctagcacttctgtggaaacgcgaact
ggtgagcaagcaccatcctctcctccactgaaggtgcgggctaggatgctgagttcaagc
acagcgctggtacagtgggaacctcctgaggagccaaatggccttatcaggggctacaga
gtatattacacacatgatgcacactcatatgcgccactcagtgcctggtacaagcacaac
acggctgatgctgcacagctggccaccatctcgaacctggtgcctagcaccacctacagc
ctgcgtgtgctagcttttacagcggtcggagatggaccaccatcccacacactgcagatt
aaaacactacagggagttccagcacagccaagtgaattagaggcagaagcggagcttgac
actcggatcatgctgcgttggctttggcctgttcaggaccaaattattaaatatgagctc
acctactgggaagctgactctggacacaagaaccatttgacctttgacccagctggttcg
tacgctgtggagggcctgaagcctgacactctgtataaattcacactggctgctcgctca
agaatgggtttaggcttgtacacacagcccatagaggctcgcacagcccagtccacccca
tctgcccctcctcaggacgtgcacctgctcagcctctcttctaccagtatcaaggtgagt
tgggtggcacctcctgttgccagtcgccatgggaacattgtgcgctactccctggcctat
caagcaccctcaggggaggaccaggagcgtcacgaggtgagagacatccctgctgattcc
accagctatgtgcttgagggactggaaaaatgggcattgtaccatgtgtgggttaaggcc
cataccgacgtagggccgggtcctgagagtagcagcacctggattcggacccaagaggat
gtgcctggagctcccccacgcagggtggaagtggacgcagtgaactctacagcactccat
gtgacctggaaacctccactggtgcagaagcagcatggagagatccgcggttatcaggtg
gtttactcccgtgtggaggatggagaacctcgaggacagcccactatcctggacatagca
ctgcccgatgctcaggaggcctatatcacagggttgcaggctgagacatcatactctgtt
accgtggcagcgtacacaactaaaggtgatggagctcggagtaaagccaaggtggtgacc
actacaggggcagtgccaggtaagcccactatgatcatcagcactacagtgggtaacaca
gctctgatccagtggcagccaccaaaagagacgtttggcgagctgttgggctttagactg
cagtataaatgccaggatgacgatgataatgatgacaaagatgacaatgatgaaggctcg
ttcatcacacgccacttcatgcgcaccgatgaccatttcactgtcaccggactgctcaag
ggctccacttatagcttcagactgagtgccaagaaccgagcgggccatggagaggagcac
attaaagagatcacgacccctgatgacattcctagtggttacccacaaaacctcagtgtg
gtgggattgagctccacctcgaccactctatcttgggcacccccaccactggtgcagaga
aacggcaaaattgtgcgctatgatattgtgtaccgggacatcaacagtgtaaagaatcaa
accaacattacaacagagactcgcattagcatcggcggcctgaaacccgacactacctac
gatatcagagtgagagcctataccaagaaaggaccaggacctttcagccccagcattcag
agcaggaccatggccacatctgtgcctgaatttgccaaaaactttggggtgaaagcagca
acaaagacctcagtactacttacatgggaggtgcccgaaacctacaagcctcaagtgcct
tttaagatcctgtataaccagcagagcgtggaggtgcagggtgatctgcggaggaaactg
atcactcgtcttcagcccgataccgagtactcctttgtgctgatgaacagaggcagcagt
gccggcggactgcagcagcaagtgtccatccgtacagccccggacttgctggacaaaaaa
cccagccgttcggcccacgagtctgctgtgggtggacgagtcactctgacattgcccacg
gtgaccgccagcgcggctgcacgtatcagatggtacttcatagtggtgttgcccatgagt
caagctacatcaagccactgggaaagtccagaagatatcgaccttgacgagttgttagaa
gctggtggtgatacaactgtgatgaagaggaagaagaggcagagtgacgactccctgaag
ccatacatcgctgcgaggctgcacacactgccagagagcttcacactgggagacgagcgg
tattacagtggcttctacaacagaccactgctcgctcagactcagtaccgaaccttcatc
atggctgcactccaggagcatgactctaaaacattcgctacaagcccattctcagacccc
atcatggtgcaggttcaaatgtcccgacatgcagaagatcccgagatgctttgggtgatg
ggaccggtgctggctgtcgtcctcatcatcattattgtcatcgccatcctactcttcaag
agcaaacaggagaggaagcgagcatctccctcagtgaaggatgaacacacagccggagtg
aaggaccatctgctggcccactcgtctgatcccgtagagatgaggagactaaactaccaa
acacagggttccagtgacccaagttgtccagacactccaaggatgagagagcacccaccc
atctccgtctgtgacctggccgaacatattgagcggctcaaagccaatgacagcctccgc
ttctctcaggaatatgagtcaatcgatcccgggcagcagttcacctgggaacactccaac
ctcgaagtgaacaagccaaaaaaccgctatgctaatgtcatcgcatacgatcactccaga
gtcgtcttgtcacccatcgatgctatacccgggagcgactacattaacgcaaactacata
gacggatacaggaagcagaatgcctacatcgctacacagggccccctgcctgagactgtc
agtgatttctggaggatgctgtgggaacagaggagcagcaccatcgtcatgatgactcga
ctggaggagaagtcaagagtgaagtgtgatcagtactggccgagtcgggggacagagaca
tacggcatgattcaggtcacgctactggacacggtggagcttgccacatacagtgtcaga
acctttactatgtacaagagtggctccagtgaaaaaagagaggtgaggcagttccagttc
atggtgtggccggatcatggcgttcccgagtatcccactcccatcctagctttcatgcgc
cgagtcaaatcttgtaacccgcctgatgctggacccatggtggtgcactgcagtgcgggc
gtgggtcggacaggctgcttcatcgtgatcgatgccatgctggagcgcatgaagcatgag
caaacagtggacctgtatggtcatgtgaccctgatgcgctctcagaggaactacatggta
cagacagaggatcagtacatcttcatccatgacgcgctactggaggcagccgtctgtgct
cacaccgaggtcccagcacgcagcctttattctcacctccagaaactgacaaacacacct
tcgggggagactgtcactgccatggagctggagttcaagaaactggccaactccaaagca
cacacgtcccgcttcatcagcgccaacctgccgtgcaacaagttcaaaaaccggctcgtc
aacatcatgccattcgagtcgagccgagtgtgtctgcagcccatcagaggagtggaggga
tccgactacatcaatgccagcttcatcgatggatataggcagcagaaggcgtacatagca
acacagggtcctctggcggagaccacagaggacttctggagaatgctttgggagcacaat
tccaccatcgtagtcatgctgactaaactcagagagatgggaagggagaagtgccatcag
tactggccagctgagcgttctgcacgctatcagtactttgtagtggaccccatggctgaa
tacaacatgcctcagtacatcctgcgagagttcaaagtcactgatgccagggatggccaa
tctaggactatccgtcagtttcagttcactgattggccagagcagggtgtgccaaagaca
ggggaggggtttatcgattttattggacaggtgcataaaaccaaggagcagtttggccag
gatggaccaattactgttcactgcagtgccggtgtgggtcgtacaggggtgttcatcact
ctgagtatcgtactagagaggatgagatatgagggagtagtggatctgttccaaaccatc
aaaacactgcgcactcagaggccagccatggtacagaccgaggaccagtatcagctgtgc
taccgagcagctcttgagtacctgggcagctttgatcactatgcaacataa
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integrated database retrieval system
