Tachysurus fulvidraco (yellow catfish): 113642970
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Entry
113642970 CDS
T08119
Symbol
pbx1b
Name
(RefSeq) pre-B-cell leukemia transcription factor 1b isoform X2
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113642970 (pbx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113642970 (pbx1b)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
113642970 (pbx1b)
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GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
DUF7260
UCH
GAIN
LZ3wCH
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
113642970
NCBI-ProteinID:
XP_027002687
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Position
5:14571988..14659602
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AA seq
429 aa
AA seq
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MDEQPRMMHSHAGVGMAGHPGLPQHMQEGTGGADGDGRKQDIGDILQQIMTITDQSLDEA
QARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPPDAQLMRLDNMLLAEGVSGPE
KGGGSAAAAAAAAASGGAGADNSAEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMN
LLREQSRTRPISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFN
KQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEE
ANMYAARTAVNAASVSAHGSQANSPSTPNSAGSAGSFNMSNSGDLFMSVQSMNGDSYQGA
QVGANVQSQVDTLRHVISQTGGYSDGLTANQMYSPQGISANGGWQDATTPSSVTSPTEGP
GSVHSDTSN
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcagccgcggatgatgcactctcacgccggggtggggatggcggggcacccc
gggctgcctcagcacatgcaggagggtaccgggggagccgacggagacggcaggaaacag
gacatcggagacattttacaacaaatcatgaccattacagaccaaagtctggacgaagcg
caggccaggaagcacgcgctgaactgtcacaggatgaagcccgcgctctttaacgttctg
tgtgaaataaaagaaaaaacagtgctgagtatccgaggtgcccaggaagaagagcctccc
gatgcccagctcatgagactggacaacatgctgttggctgaaggagtgtcggggccagag
aaagggggtgggtcagctgcagccgcagccgctgcagcggcttcaggaggagccggagct
gataactcagctgaacactctgattatagagccaagctctcccagatccgccagatttac
cacaccgaactggagaaatatgaacaagcatgtaacgagtttaccactcacgtgatgaac
ctgttgcgagagcagtcgcgcacacggcctatctcacccaaagagatcgagcgcatggtc
agcatcatccaccgcaagttcagctccatccagatgcagctcaagcagagcacctgcgag
gcagtcatgatcctccgctcccgcttcctcgatgccaggaggaaaagacgaaacttcaac
aaacaggccaccgagatcctgaacgagtacttctactcccacctaagtaatccgtatccc
agtgaggaggccaaggaggagctggccaagaaatgctctatcactgtctcccaggtgtct
aactggttcggaaacaaacgaatccggtataagaagaacattggaaagtttcaggaggaa
gccaacatgtatgcagccagaactgcagtgaatgcggccagcgtgtcagctcacggcagc
caggcaaattccccctccacccccaactcagcaggttctgctggctcttttaacatgtcc
aactctggtgatttgtttatgagtgtgcagtctatgaatggcgattcataccagggggct
caagtgggagccaacgtgcagtcgcaggtggatacccttcgccatgttatcagtcagaca
ggaggatacagtgatggcctcacagccaaccagatgtacagtccgcagggcatcagtgct
aacggtggatggcaggatgctactaccccctcctcagtgacctcacccacagaaggaccc
gggagtgttcactctgacacctctaactga
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