Tachysurus fulvidraco (yellow catfish): 113644111
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Entry
113644111 CDS
T08119
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X2
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113644111 (dhx9)
03012 Translation factors [BR:
tfd03012
]
113644111 (dhx9)
Enzymes [BR:
tfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113644111 (dhx9)
5.6.2.6 RNA 3'-5' helicase
113644111 (dhx9)
Spliceosome [BR:
tfd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113644111 (dhx9)
Translation factors [BR:
tfd03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113644111 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
AAA_19
nSTAND3
ATPase
AAA_14
AAA_22
Motif
Other DBs
NCBI-GeneID:
113644111
NCBI-ProteinID:
XP_027004475
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All DBs
Position
1:21621864..21632957
Genome browser
AA seq
1255 aa
AA seq
DB search
MGDIKNFLYAWCGKKKLTPNYDIRAAGNKNRQKFMCEVRVDGFSYIGMGNSTNKKDAQAN
AARDFVNYLVRMGQMTASEVPALGASAPCVPDGGGGGGGGEGSGFGMLPGSGPLPPHLLV
KQEMDTEPSSIPVPGVTGLGYSGLNNPQWERGANLQDYYSRKEEQDAKATLESEEVDLNA
GLHGNWTLDNAKARLNQFFQKDKIQTDYKYNQVGPDHNRSFIAEMTIFVKQLRRNIFARE
HGSNKKLAAQSCALSLVRQLYHLGVIEAFTGLTKKKDGETLEVYNVNVSDELKHQLQSVI
PELGIQIPPVDPSGPVSLIQGKLAHFEPSQKQNTGGVVQWSPPQVNWNPWTSSNIDEGPL
AFCTPEQISSDLQNELHYQLEHDTNLQERLHEREQLPVKKFEEEIMNTINSNPVVIIRGA
TGCGKTTQVPQYILDQYVKGGRASECNIVVTQPRRISAVSVAERVAYERGEDVGKSCGYS
VRFESILPRPHASILFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLMVVLRDVIL
AFPDVRVVLMSATIDTTMFRDYFFNSPIIEVFGRTFPVQQYFLEDCIQMTQFVPPPSDKK
RKDKDEEGGEEEVNCNLLCGPEYGPETKRSMAQMNEKETPFELIEALLKYIETLQVSGAV
LIFLPGWNLIYSMQKHLEMNAHFGSHRYRILPLHSQIPREEQRLVFDPVPEGVTKVILST
NIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFS
FHLCSKARFEKLETHMTPEIFRTPLHEVALSIKLLRLGAIGHFLAKAIEPPPLDAVIEAE
HTLRELDALDTNDELTPLGRILARLPIEPRLGKMMIMGCILNVGDAVCTISAASCFSEPF
ISEGKRLGFVHRNFAGTRFSDHVALLSVFQAWDEVRMGGEEAEARFCEHKRLHMSTLRMT
WEAKVQLKEILINSGFPEECLMNQVFNNVGPDNNLDVVISLLTYGSYPNVCYHKEKRKIL
TTEGRNALIHKSSVNCPFSSQDPSYPSPFFVFGEKIRTRAISAKGMTMVSPLQLILFAAK
KITSNGEVVVLDDWINLRIEHELAGSIAGLRAAMEALVVEVTKNPEYIRSIDPTNERLLN
VIRFLSRPSSAGLNLMASNPRFGDGPRPPKMPRMDGGAGGFHGRGGYRGGGGYGGGGGYG
GGGGYGGGGYRGSGGYSGGGGYRGSGGYRGGGYGGNGGGGYRGGRGFNRGGYGGY
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgggggacataaaaaattttctgtatgcctggtgcggaaaaaagaaattgacccccaac
tatgatatccgtgcagctggaaacaagaacaggcagaaatttatgtgcgaggtgagagtt
gatggtttcagttacatcggaatgggaaactccaccaataagaaagatgcccaggccaat
gcagcaagagactttgtaaattatctggtccgcatgggacagatgaccgcttctgaagta
cctgctttaggtgccagtgctccatgtgtacctgatggtggtggtggtggcggtggtggt
gaaggaagtgggtttgggatgctgccaggcagtggtcctttgcctccacatttacttgtc
aaacaagagatggacactgagccaagctctattcctgttcctggagtgaccggactcggc
tactcgggcttgaataatcctcagtgggaacgaggcgctaaccttcaggactactactcg
aggaaagaggaacaggatgcaaaagctaccctggagtctgaagaagtagatttaaatgcc
ggtctgcacggaaactggactctggacaacgccaaggctcgtctaaaccagttctttcag
aaagacaaaatccaaacagactacaaatacaaccaagtggggccagaccacaacaggagc
ttcattgctgaaatgactatctttgtgaaacagctacgacgaaatatctttgctcgggag
cacggctccaataaaaagctggcggcccagtcgtgcgcgctctccttggtccgtcagctg
tatcacctgggtgtcatcgaggcttttacaggactgaccaagaagaaagacggagagacg
ttggaggtttataacgtgaacgtgagcgacgagctgaagcatcagctacagagcgtcatc
ccagagcttggcatccagattcctccagttgatcccagcggcccggtgtctctgattcag
ggcaagttggcgcactttgagccatcacagaagcagaatacaggaggtgtggtgcagtgg
tctcctcctcaggtcaactggaacccttggaccagtagcaacatcgacgagggacctctg
gctttttgtaccccggagcagatcagttcagacctgcaaaacgaactccactaccagcta
gaacatgacaccaacctgcaggagagactgcatgagcgagaacagcttcctgttaaaaag
ttcgaggaggagattatgaacaccatcaacagcaatccggtggtgatcatccgtggggcc
acgggctgcggaaagaccactcaggtgccgcagtacatactggatcagtacgttaaagga
ggacgagcctcagagtgcaacattgtcgtcactcagcctcggcggatcagcgcggtgtcg
gtggccgagcgcgtggcgtacgagagaggcgaggacgtggggaagagctgcggctacagt
gtgcgctttgagtccatcctgcccagaccgcatgccagcatcttgttctgcaccgtcggg
gttctcctgaggaagctggaagctggaattagaggaatcagccatgtgatcgtggacgaa
attcacgagcgagacattaatactgatttcctgatggtggtgttaagagacgtgatcctc
gctttccctgacgtccgcgtggtcctcatgtccgccaccattgacacgaccatgttcaga
gattacttcttcaactctcccatcatagaagtgttcggacgcactttccccgtgcagcag
tatttcctggaagattgcattcagatgacgcagtttgttccaccgccgtcagataagaag
agaaaagacaaagatgaggaaggtggcgaggaggaggtaaactgtaacctgttgtgcgga
cccgagtacggtcctgagaccaaacgctccatggcccaaatgaacgagaaggaaacgcca
tttgaactgatcgaggccctgttgaagtacatcgaaacattgcaggtgtccggagccgtg
ctgatcttcctgcctggctggaatctcatctattccatgcagaaacacttggagatgaac
gcacatttcggtagccatcgttacaggatcctgcctcttcattctcagatccccagagaa
gagcaacggctggtgtttgaccccgtacctgaaggagtgaccaaggttatactatcgaca
aatattgccgagaccagcatcaccatcaacgacgtggtctatgtcatcgactcctgcaag
cagaaagtgaagctattcactgcccataacaatatgaccaactacgccactgtgtgggca
tccaaaaccaacctagagcagagaaaaggcagagctggacgcgtcaggccaggcttctcc
ttccacttgtgcagcaaagcacgctttgagaaactggagacccacatgaccccagagatc
ttccgcacaccactgcatgaggtggcacttagcattaaactgctcaggctcggtgctatt
ggccattttctggcgaaagccatcgagcctcctccactggatgctgttattgaagctgaa
cacactctccgagagctagacgcgcttgacactaacgacgaactgaccccgctggggcgc
atcctggcccggctgcctattgagcctcgtctgggaaagatgatgataatgggctgcatc
ctaaacgtaggagatgccgtgtgcaccatttctgccgcctcgtgcttttccgagccgttc
atcagcgaaggaaagcgtttaggatttgttcacaggaacttcgcaggcacccgattctct
gaccacgtggccctactttctgtatttcaagcctgggatgaagtccggatgggtggagaa
gaggcagaagccaggttctgtgagcacaagcgtttgcatatgtccactttaaggatgacc
tgggaggccaaagtgcagctaaaggagatcctgatcaactctggttttcctgaagaatgc
ttaatgaatcaggtgttcaacaacgtggggccagacaataacctggacgtggtgatctca
ttgctgacctatggctcttaccccaacgtctgttaccacaaagaaaagaggaaaatcttg
actaccgaaggtcgaaatgcactcattcacaagtcttctgttaactgccccttctccagc
caagaccccagttatccgtcacctttctttgtctttggggaaaagattcggacccgagcc
atttcggccaaagggatgaccatggttagccctctccagctcattttgtttgccgccaag
aaaatcacgtctaacggggaggtggtcgtacttgacgactggatcaacctgcgtattgag
catgaactagctggcagcattgccggactaagagctgcgatggaggctttagtggtggag
gtgaccaaaaacccagagtacatcagaagtattgatcccaccaacgaacggctactgaat
gtcattcggttcctctccagaccctcgtctgctggactcaacctcatggccagcaatccg
cggtttggagatggtccacggcctccgaagatgccacggatggatggcggtgctgggggg
ttccatgggcggggaggatatcgaggtggtggaggatacggaggtggtggaggatacggg
ggtggtggaggatacgggggtggtgggtacaggggatccggcggttacagtggtggaggc
ggataccgggggtcaggagggtatcgtggaggtggatacggagggaatggtggaggtggt
tacaggggaggtcgtgggttcaacagagggggatatggaggatactag
DBGET
integrated database retrieval system
