Tachysurus fulvidraco (yellow catfish): 113645063
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Entry
113645063 CDS
T08119
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113645063 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113645063 (c9orf72)
Membrane trafficking [BR:
tfd04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
113645063 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
113645063
NCBI-ProteinID:
XP_027006170
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All DBs
Position
4:11813605..11822131
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AA seq
462 aa
AA seq
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MSTGCPPQSPAVAKTEVVMEGWCPLLAATFAYWDNILGPRVWHIWAPKGQGSMLLSDGEV
TFLANHTLNGEILRSAESGAVDVKFFVLAEKGVIIVSLIFDGELRGDKNTCALSIILPQS
ELDFYLPLHIVCVERLKHTVRKGRIYMQKGYGIIALLTSEIVPIMELLSSMKTHSVPEEV
DIKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSVVVGSNPEKVNKIVLTLCLFLTPAE
RKCSRLCRADGAFKYDTGLFVQGLLKDSTGSVVLPYRQVLSSPYPSTHIDVDINTVKQMP
PCHEHMYHQRRYMQAELSALWKTNSEDEISPDHLINIQESFTPDLNIFQDVMHKDTLVKS
FIDEVFLLKPGLSLRSVYLSHFLLLLHRKALTLLRYIEDETQKGKKPFRSLRNLKTDLDL
TVEGDLNIIMAMAEKLRPGLHSFVFGKSFFTSVQERDILMNF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctactggttgcccaccgcagtctccagctgtggctaaaacagaagtagtgatggaa
ggatggtgcccacttttggcagccacctttgcctactgggacaacattttgggaccccgt
gtatggcatatctgggccccgaaaggtcaggggtcgatgttactcagtgatggcgaggtg
acgtttttggcaaatcacacgctgaacggtgaaattctgcgtagtgccgagagtggtgcc
gtggacgtaaagttcttcgtcttggcagagaaaggagtgatcattgtgtcactgatattt
gatggcgaattgagaggtgacaagaacacgtgcgcgctgtccatcattctgccacaatct
gaactggatttctaccttccactgcacattgtgtgtgtggaaaggctcaagcacactgtt
cgcaagggacgtatctatatgcagaagggttatggcattattgctttattaacctctgag
attgttcctatcatggaacttctctcatccatgaagactcatagtgtgccagaggaagta
gatatcaaagacaccgtattgaatgatgatgatataggcgacagctgtcatgaggacttt
ctgcacaaagctatcagctcacatctacagacttgtggctgctccgttgttgttggcagt
aacccagaaaaagtcaataagattgtgctgacgctatgtctgtttctcactcccgctgag
aggaagtgctcacgactgtgccgagccgatggcgctttcaaatacgacaccggcctgttc
gttcaaggcctgctgaaggactccacagggagcgtcgtgttgccttaccggcaggtgctt
tcttctccctatccatctactcacatcgatgtggacattaacacagtgaagcagatgcct
ccttgtcacgaacacatgtaccatcaacgtcgctacatgcaggccgagctcagtgccctc
tggaagaccaacagcgaggatgaaatcagccctgaccacctcatcaacatccaagaatcg
tttactcctgacctgaatatatttcaggatgttatgcacaaagatacactggtgaagtct
ttcatagatgaggttttcctcttgaaaccaggtctaagccttaggagtgtatacttgtcg
cattttctcctactgctgcacaggaaggctctaacactgctcagatatatcgaggatgag
actcaaaagggaaagaagccattccggtcactgcgtaatctgaagaccgatctggatttg
actgtggaaggagacctgaacatcatcatggcaatggcagagaagctgaggccaggcctt
cactcctttgtgttcgggaagtccttcttcaccagtgtgcaggaacgtgatatcctaatg
aatttctga
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