Tachysurus fulvidraco (yellow catfish): 113645180
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Entry
113645180 CDS
T08119
Symbol
nectin4b
Name
(RefSeq) nectin-4 isoform X7
KO
K06593
poliovirus receptor-related 4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
tfd04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
113645180 (nectin4b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
113645180 (nectin4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfd04515
]
113645180 (nectin4b)
Cell adhesion molecules [BR:
tfd04515
]
Immunoglobulin superfamily
Nectin family
113645180 (nectin4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
V-set
Ig_2
ig
C2-set_2
LapA_dom
TMEM154
DUF6377
EphA2_TM
Protocadherin
RIFIN
7tm_7
MLANA
DUF3169
Lectin_N
Motif
Other DBs
NCBI-GeneID:
113645180
NCBI-ProteinID:
XP_027006394
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All DBs
Position
22:complement(5649434..5663103)
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AA seq
586 aa
AA seq
DB search
MKKMSHCFALILTAVTACVCGEFLQPPPSLTLLTFAEEETRLPCEFKPQDGEKVIQVTWS
VEKSSNDKEQIITRHMTEGLQEFPSFAGRVRFTSSDPMKDSTLLILSTRESDQATYTCHI
STFPSGNFERQISLTVWRIPISTLEPVVLEEGQSFRVAATCRAIGLPPPRLSWETDVPGQ
IQNRSSGDGVVTSQYSLHPLRSMNGRKLDCLVWHPALDQPRRLSNQLIVHFPPDAVVSGY
DHRWAVNRNGAELKCEGAGNPPPHNFTWTRKGGVLPKDVFVEGDRLRFTRPLNKSDEGVY
ECEARNSVGSVKTEVNVQIYASKSSQLEANFNNLLLIIVGGAAGVLVVVMTTIILLITCR
HRRKTRKLKQELSETKEEINNLSRQTSMRRLNSFSTDQRMRTEESMLLRMESPVRSSVYT
LEERSGIYDERDVDRDSIGRPALHLSCDSMRGSGRRKETEVEKQDRIQRVASYIKSSNMS
LDVELRRDPSYPPLSISSGATREGGKEKDVWGQREGMPEGEEGDSAFNSHQLLETLSKNF
QYTNGVLRPKPNPNAIMLNPRGQYIKREGQSDSPQHTIPAVFSGHQ
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatgtcgcactgttttgcactaatactgactgcagtaactgcctgtgtctgt
ggcgagtttcttcagccccctccgtccctgactctgctcaccttcgccgaggaggagact
cgactaccgtgtgagtttaaaccacaggacggtgaaaaagtaatacaggtgacctggtct
gttgaaaagagcagcaatgacaaggagcagatcatcaccagacacatgacagaggggctt
caagagtttcctagctttgcaggccgtgtgcgcttcacaagttctgatccgatgaaagac
tcaacattgttgattctgagcacaagggagtcagatcaagccacatatacctgccacatc
tccacttttccttcagggaacttcgagagacaaatcagccttactgtctggaggattccc
atctcaacactggaaccggttgtcctggaggagggtcagtcattccgtgtggctgccacc
tgccgagcgatcggcctgcctccaccgcggctttcctgggagaccgacgtgcccggtcaa
atacagaacaggagctcaggggacggggtcgtcacctcccagtattcgctgcaccctctg
cgcagcatgaatggccgcaaactggactgcttggtgtggcaccctgctctagatcaacct
cgcaggctgagcaaccaactgatcgtgcactttcctcctgatgctgtcgtttctggatac
gatcatagatgggccgttaatcggaatggagccgagctcaagtgcgagggtgctggaaat
cctcccccacacaacttcacctggaccaggaagggtggggttttgcccaaggacgtattt
gtggagggggacaggctccgtttcactcgcccattaaataaaagcgatgaaggtgtgtac
gaatgtgaggccagaaactctgtgggatcggtgaagacggaggttaatgtacagatctat
gcctctaaatcgtcccagctggaggctaatttcaacaacctcctccttataatcgtgggt
ggagcagccggggttttagtagttgtcatgacgaccatcatccttctgattacctgccgc
catagacgcaagaccaggaaacttaaacaggagctctcagagacgaaggaggagatcaat
aatctctcgaggcagacttctatgaggagacttaactcgttcagtactgaccagaggatg
cggactgaagaatccatgctactcaggatggaatctcctgtaagaagcagtgtctatacg
ctagaggagcgatcaggcatatatgacgagagagacgtcgatcgcgacagcatcggccgc
ccagccctccacctgtcctgtgactcaatgcgaggaagcgggaggaggaaagagaccgag
gtagagaaacaagaccgcattcaaagagtggcaagctacataaagagcagtaatatgtct
ctggatgtagagcttcggcgagacccgagctatcctccattgtccatcagctcaggggct
acaagagaaggagggaaagaaaaagacgtatggggacagagagaaggcatgccggaggga
gaggagggagacagcgccttcaactcgcatcagctcttagagacactctcgaaaaacttc
cagtacaccaacggagtcctgaggccgaaacctaacccgaacgctataatgctgaaccca
cgtggccagtacataaaacgagaaggccaaagtgattcgccacagcacaccatccctgca
gtcttttctggtcaccagtaa
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