Tachysurus fulvidraco (yellow catfish): 113645804
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Entry
113645804 CDS
T08119
Symbol
ifng1
Name
(RefSeq) interferon gamma 1 isoform X1
KO
K04687
interferon gamma
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03050
Proteasome
tfd04060
Cytokine-cytokine receptor interaction
tfd04217
Necroptosis
tfd04350
TGF-beta signaling pathway
tfd05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
113645804 (ifng1)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
113645804 (ifng1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
113645804 (ifng1)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
113645804 (ifng1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113645804 (ifng1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tfd03051
]
113645804 (ifng1)
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tfd04052
]
113645804 (ifng1)
00536 Glycosaminoglycan binding proteins [BR:
tfd00536
]
113645804 (ifng1)
Proteasome [BR:
tfd03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
113645804 (ifng1)
Cytokines and neuropeptides [BR:
tfd04052
]
Cytokines
Interferons
113645804 (ifng1)
Glycosaminoglycan binding proteins [BR:
tfd00536
]
Heparan sulfate / Heparin
Cytokines
113645804 (ifng1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFN-gamma
DUF2207_C
GCP_C_terminal
DUF7342
Myb_DNA-bind_4
Takusan
Motif
Other DBs
NCBI-GeneID:
113645804
NCBI-ProteinID:
XP_027007469
LinkDB
All DBs
Position
19:12608164..12610092
Genome browser
AA seq
179 aa
AA seq
DB search
MMTLSWRTYFVLFGMMVCSEAFLPENIKESFEHLNNHYVRKNPNPDKLYDGHSLFLDKMK
DKGFEEGEQKILMIFILDVYNKIFNQMENETQDENLKHDLHEVKEEINKLRKGYFSDKHD
NIKKYLTELLALKENDPRIQSKAIFELKTVYNKASILGTSSANNRRRRRHAKHSKRQRS
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgatgacactgtcctggagaacatattttgtcttatttggaatgatggtgtgctctgag
gccttcctcccagagaacatcaaggagtcttttgaacatctgaataatcactatgtaaga
aaaaatcccaaccctgacaaactatatgacggacactccctctttctagacaagatgaag
gacaaaggatttgaggagggtgaacagaagatcctcatgatttttattctcgatgtatac
aacaaaattttcaaccagatggagaatgagactcaggatgaaaacttgaagcatgacttg
catgaagttaaagaagaaattaacaaactgaggaaaggctacttctctgacaaacatgat
aacatcaagaaatatttaactgagctgctagctcttaaggaaaatgacccacggatccag
agcaaagcgatatttgagctgaagactgtctacaacaaggcatcgatcttggggacctcc
tcagcaaataaccgccggagacgacgtcatgctaaacactcaaaaaggcaacgttcttag
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