Tachysurus fulvidraco (yellow catfish): 113647769
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Entry
113647769 CDS
T08119
Symbol
sqstm1
Name
(RefSeq) sequestosome-1
KO
K14381
sequestosome 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04137
Mitophagy - animal
tfd04140
Autophagy - animal
tfd04217
Necroptosis
tfd04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113647769 (sqstm1)
04137 Mitophagy - animal
113647769 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
113647769 (sqstm1)
04218 Cellular senescence
113647769 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113647769 (sqstm1)
03029 Mitochondrial biogenesis [BR:
tfd03029
]
113647769 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113647769 (sqstm1)
Membrane trafficking [BR:
tfd04131
]
Autophagy
Mitophagy
Cargo receptors
113647769 (sqstm1)
Pexophagy
113647769 (sqstm1)
Aggrephagy
113647769 (sqstm1)
Xenophagy
113647769 (sqstm1)
ER-phagy
ER-phagy recepters
113647769 (sqstm1)
Other autophagy associated proteins
Midbophagy
113647769 (sqstm1)
Mitochondrial biogenesis [BR:
tfd03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
113647769 (sqstm1)
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113647769 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Med3
Motif
Other DBs
NCBI-GeneID:
113647769
NCBI-ProteinID:
XP_027010494
LinkDB
All DBs
Position
17:7409740..7413574
Genome browser
AA seq
469 aa
AA seq
DB search
MSVTVKAYLLGKEDCHKEIRRFAIDHDVSSSFEYLSRKLVDVFSNLQNVAFQTYYKDEDD
DMIAFSSDDELMMGLTMVKDATFRIFIKEKKEHKRDFPHYMDQGFAVHPPGPHHMGPPGP
HHMGPPGPHHMGPPGHPTMCPPPHHPSSLVHLGVTCDGCEGQVAGTRFKCTVCPNYDLCA
TCQAKGLHKEHALLPIFHPMANMYEWLPRGKLLRKMRHCMWAGAQAQAHAQAQAQNQAQP
GSSGGQPSSQQANSQESQAQTEASCAQTNMEYLKNIGEGVAALLSPLGIDVDIDVEHEGK
KAKVTPTPPVSSGPPSGRSDSSSGGISKGAAGSPSSVGSTGDGAKMVLLDQKEKSNDEEW
THLSSKEVDPSTGELQSLRMEVDGANDNPSPRSHSSTLNQGPSGLREAALYPHLPQDADP
RLVESLSQMLSMGFSDEGGWLTRLLHTKNYDIGAALDTIQYAKAPGQRK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgacagtgaaggcttatctcctcggaaaagaggactgtcacaaagagatccgt
cgcttcgccatcgatcacgacgtgtcctcaagtttcgagtacttgagtcgcaaactggtc
gatgttttctcaaacctccaaaatgtcgctttccaaacgtactacaaagatgaggatgac
gatatgattgccttttcttctgacgatgagcttatgatgggcctgactatggtgaaggac
gctaccttccgcattttcatcaaggaaaaaaaggagcacaagcgtgacttcccacattat
atggaccaagggtttgctgtccatcctccaggaccccatcacatgggtcctccaggaccc
catcacatgggtcctccaggaccccatcacatgggtcctccaggacaccctactatgtgt
ccacctcctcatcacccatcatccctggttcaccttggtgtgacttgtgatggttgtgag
ggacaagtggctgggacccgcttcaagtgcactgtgtgccccaattatgacctgtgcgcc
acctgccaggccaagggcctccacaaggaacatgcactcctgcccatttttcaccccatg
gccaatatgtatgagtggctaccccgtggcaaacttttgcgcaagatgaggcactgcatg
tgggctggggcccaggctcaggctcatgcgcaggctcaggctcaaaaccaggcccagcct
ggttcatctggtggccagcccagctcccagcaggctaactctcaggaatcccaagctcaa
actgaagcctcatgtgcccagaccaatatggagtacctgaagaacattggagaaggtgtg
gctgccttgctaagcccccttggcattgatgtggacattgatgtagaacacgagggcaag
aaggccaaagtgacaccaactcctcctgtatcaagtggaccccctagtggccggagtgat
agtagctctggaggaatttccaagggggcagccggaagtccaagcagtgtagggagtaca
ggtgatggggcaaagatggttttgctggaccaaaaggaaaaaagtaatgatgaggagtgg
acccatctgagctcaaaggaagtggacccatcaacaggtgagctccagtcactgaggatg
gaggtggatggagcaaatgataaccctagtcctcgcagccacagctccactttaaaccaa
ggacctagtggtctacgtgaggctgccctctatccacatctgcctcaagacgcagaccct
cggctggtggaatctctgtcccagatgctgtccatgggcttttcagatgaaggtggatgg
ctgaccaggctgctccacactaagaattacgacattggagctgctctggacaccatccag
tatgccaaagccccaggtcaacggaaatga
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