Tachysurus fulvidraco (yellow catfish): 113648622
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Entry
113648622 CDS
T08119
Symbol
abcd4
Name
(RefSeq) ATP-binding cassette sub-family D member 4
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd02010
ABC transporters
tfd04146
Peroxisome
tfd04977
Vitamin digestion and absorption
tfd04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113648622 (abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
113648622 (abcd4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
113648622 (abcd4)
04980 Cobalamin transport and metabolism
113648622 (abcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113648622 (abcd4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tfd02000
]
113648622 (abcd4)
Enzymes [BR:
tfd01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
113648622 (abcd4)
Membrane trafficking [BR:
tfd04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
113648622 (abcd4)
Transporters [BR:
tfd02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
113648622 (abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_16
AAA_30
DEAD
FtsK_SpoIIIE
DUF87
AAA_7
AAA_22
NACHT
AAA_29
Motif
Other DBs
NCBI-GeneID:
113648622
NCBI-ProteinID:
XP_027011687
LinkDB
All DBs
Position
3:complement(30106861..30117200)
Genome browser
AA seq
601 aa
AA seq
DB search
MPSSENTGHNKRPRLDWRFLKKFCRILRVLFPRWCSQNVVMYGTLLMVTLLVQLVIYQVG
LIPSQFYGVLSEKNYYKFKELVAFSILLIVLNVALKSLEQYISNLLYLGWRKCLTQKLHG
DYFTGQVYYTLNVLQEDIDNPDQRMTQDAERLCKQLSSMASRLVISPFTISYYSYQCFKI
TGWIGFVSILGFFLVGTVANKLLIGPIVSTLVEQEKLEGNFRFKHMQIRVNAESAAFYRA
GTVEHVRTDHRLQSLLRTQRKLIDREFLLLIAVNTFDYMGSILSYIIIAIPIFAGVYDGL
TPGEISALVSKNAFVCIYLINCFTQLIDLSTTVSDVAGYTHRIGELQEVMQDINGKHCDD
WGSAEMADSDRETSPASSDAAVILNKLSFTSPVSEGLLVKNLCLRVYEGTHLLVVGNTGT
GKTSLLRVLNLLWKPSNGSVQTNVCFGPRGLMFLPQKPFLTDGTLREQVIFPLADRYPVT
DPVDTERILRCLELAGMSYLLKRTGGLDGRVDWNWYDVLSPGEMQRLCFARLFYLQPKYA
VLDEATSALTEEAEEQMYTACKQLGMTLISLGHRSSLKKYHDEMLRLCGGGHWDHSKLDS
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgccgagctcagagaacaccggtcataataaaaggccgaggctggactggaggttcctc
aagaagttctgcaggattttacgagtacttttcccacgctggtgcagtcagaatgttgtc
atgtacgggacgctgctcatggtcactctattagttcagctggtgatttatcaggtgggt
ctgatcccgagtcagttctatggcgttttgtctgagaagaactactacaaattcaaggag
ctggtggcattttccatcctgctcatcgtccttaacgttgcactcaagagtctggagcag
tacatcagcaatctcctgtacctcggctggaggaaatgtttaacgcagaagctccatgga
gattacttcaccggacaggtctactacaccctcaacgtgctccaggaggacatcgataac
ccagaccagaggatgactcaggatgcagagaggttgtgtaagcagttgagcagtatggcc
agtcgactggtcatttccccgtttaccatctcctactattcctaccagtgctttaaaatc
actggatggatcggatttgtcagcatcctcggcttcttcttggtcggcactgttgccaac
aagctcctgatcggcccgatcgtgtccacgctggtcgaacaggaaaagctggaaggaaac
ttcagattcaagcacatgcagatcagagttaatgccgaatcagcagctttctacagagca
gggacggtggaacacgtgcggacggaccacaggcttcagagtctcttgcgcacacagagg
aagctgatcgaccgggagttcctgctccttattgccgtaaacacgttcgactacatggga
agcattctcagctacatcatcatcgccatacccatctttgcgggcgtgtacgacggtttg
accccgggggagatcagcgctctcgtcagcaagaatgccttcgtgtgcatatacctgatt
aattgtttcacgcagctcatagatctttcaaccacagtctcggatgtcgcaggttacacc
cacaggattggagaactccaggaagttatgcaggacatcaacgggaagcattgtgatgac
tggggttcagcagagatggccgacagcgacagagaaacctcaccagcttccagcgacgca
gccgtcatcctgaacaagctttcttttacgtctccggtctctgagggtctgctggtgaag
aatttgtgtctgagggtctacgaggggacgcacctgctagtggttggaaacacaggcact
gggaaaacgtctctcctcagggtcctcaaccttctgtggaaaccttctaatggttctgtt
cagacgaacgtctgtttcgggccgagaggactcatgttcttgccccagaaacccttcctg
accgacggcacgcttcgagaacaggtcattttccctttagccgaccgctatccagtcaca
gatcctgtagacactgagagaattttgcggtgtctggaactggccgggatgtcctacctt
ttgaagaggaccggcggcctggacgggagagtggactggaactggtatgacgttctttca
ccaggtgagatgcagagactgtgcttcgcgaggctgttctacctgcaaccgaaatacgca
gtgctggacgaagccaccagtgctttgaccgaagaagcagaggaacagatgtacacagct
tgtaaacagctgggcatgactctgattagcctgggtcaccgcagcagcctgaagaagtat
catgatgaaatgctgaggctgtgtggaggcggtcattgggatcacagtaaattggattcg
aggtga
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