Tachysurus fulvidraco (yellow catfish): 113650306
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Entry
113650306 CDS
T08119
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfd04515
]
113650306
Cell adhesion molecules [BR:
tfd04515
]
Cadherins
Protocadherins
113650306
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
113650306
NCBI-ProteinID:
XP_047661146
LinkDB
All DBs
Position
20:complement(1259280..1261946)
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AA seq
832 aa
AA seq
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MGMMLFFRRRIYCCYFILVWNTIEAHVRYVIPEELRGGSVVGNIAKDLGLDLSEVGDRKL
RIASESGKQYFSVAAESGELIVNERIDRESLCGQTVPCLLPLEAVVENPLQLHRVEIEIQ
DINDNTPSFHYNQRILNIPESINPGAKFPLESADDPDVGSNTLQSYTLGGNKYFVLNVKT
QDGIKIPELVLDKPLDREKQATHKLILTAVDGGKPGRSGTCEVNVIVLDVNDNAPQFEKS
FYEANVAENELVGNEIIKVSAVDLDEGANGEIEYVFADKTPDVIKDIFNINPTTGVISVK
GKLDFEQANLYKFDLVAKDRGNPQMEGHCSVKIMISDINDNAPEIVITSLSSPVPENSPN
NTVIALISTKDADSGENGKVNLSVASGTPFKLNPSLSNRYTLVTNGQLDREKYPEYEIKL
NAIDSGLPALHAEKIVKISISDVNDNPPVFSQTSYTVYTRENTAHGSILCSVLANDPDLD
QNAKISYSILDSKVQDVFVSSYTYINSDNGSIYAMHSFDYEKMKVFQIRVQAKDHGSPSL
SSNATVHVFIVDQNDNAPAVIYPSALMGSVSHQRMPRSAKAGHLVTKVTAVDADSGHNAW
ISYRLAEATDTSLFTVTLHTGEVRTKRSVSEHDDSSQRLLIEIKDNGEPEQSTTVTVDIL
IEDGFHEPISDFRHKHTEPDKKSSKITLYLIISLASVSLLCLLTFLVLLVKCARSSRGSS
SCCMRRSDGEYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFGSYLSPMSEFSDFTL
VKPSSTTDFTNTLSVLDASLPDSTWTFESQQVRSDFCLSSCSEHYCYKFYIY
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgatgttatttttcaggaggaggatatattgctgttatttcattcttgtgtgg
aatacaatagaggcgcacgtccgttatgtcatcccagaggagctgaggggaggttcggtg
gttggaaatatcgctaaagaccttggattggatttatccgaggtcggagatcgtaaactg
cgaatagcctccgagtcgggtaagcagtacttcagtgtggccgcggagagcggagagctt
attgtgaatgaaagaattgatagagagagcctttgtgggcaaacagtgccgtgtttattg
cctctggaagcagttgtagaaaatcccctgcagttacatcgcgttgagattgaaatacaa
gacattaatgacaatactccgagttttcattataatcagcgcatattaaatattcctgag
tcaataaaccctggtgcgaaatttcctctcgagagcgcggacgatcctgacgtcggatca
aatactttgcagtcttatactctgggaggcaataaatattttgttttaaatgtaaaaact
caagatggcataaaaattcccgagttagtgcttgacaaaccgctcgatcgagaaaagcaa
gccactcataaactgatactgacggcggttgacggcggaaaaccggggagatctggcact
tgtgaagttaatgtcatcgtgcttgatgttaacgacaacgcgccgcagtttgagaaatct
ttttatgaagcaaacgtggctgaaaatgaactcgtcggaaatgaaattatcaaggttagc
gctgttgatttagatgagggagcaaacggggaaatcgagtacgtttttgcggacaaaaca
cctgacgtaataaaggacatttttaatattaacccgactacaggtgtgattagtgtaaag
gggaaactcgatttcgaacaagcaaatttatacaaattcgacctggtggccaaagacaga
ggaaacccgcagatggaagggcattgtagtgtaaaaattatgataagtgacattaatgac
aatgctccagaaatagtcattacatctctctcgagtccagtgcccgaaaattccccaaat
aacaccgtcattgcgctaattagcactaaagatgcagattccggggaaaacggaaaagtt
aatctcagcgtggcttccggtacaccatttaaactgaacccttctctatctaatcgttac
acactggttacaaacggtcaactagatcgagagaaatatcctgagtacgagatcaaatta
aatgcaattgattctggtttgccagccctgcatgcagaaaaaattgtaaaaattagtata
tctgatgtcaatgataatcctcccgttttctcccaaacgtcatatacagtttacacgaga
gaaaatactgcacatgggtcaatactgtgttctgtattagcaaatgacccagatcttgac
caaaatgccaaaatctcttactccattttggactcaaaagttcaagacgtatttgtctct
tcgtatacatacataaactcggataatgggagcatttatgccatgcactcatttgattac
gaaaagatgaaagtgttccagatccgagtccaagcgaaagatcacggctctccgtctctg
agcagcaacgctactgttcatgtctttattgtggaccagaacgacaacgcccccgctgtc
atttacccctctgcactcatgggctctgtctctcatcagaggatgccccgctctgctaaa
gcaggacacctcgttactaaagtcacagcagtggatgctgactcgggccataacgcctgg
atttcctatcggttagcggaggccacggacacgtctctgttcactgtcactttacataca
ggagaagtgagaactaagcgctctgtttcagagcatgacgactcctctcagagactgctc
atagagataaaggacaacggagaaccggagcagtccaccacagtcactgtggatatactg
atagaggacggctttcatgaaccaatctcagactttagacacaaacacacagaacccgat
aagaaaagcagcaaaatcacgttatatctcatcatttctcttgcttccgtctccttgttg
tgtttgctgacatttttggtcttgttagtaaaatgcgctcgaagcagtagaggcagctcg
agttgctgtatgagacggagtgatggtgaatataaaaaccccaacagaaacctgcagatc
cagctcaacactgacggacccattaaatatgtggaggtgctgggaggagacatgatgtct
cagagtcagtcgttcggttcctatctgtctccaatgtccgaattcagtgatttcacactt
gttaaacccagcagtaccacagactttacaaacactctaagcgtgctcgatgcgtcacta
ccggacagcacgtggacgtttgagagtcagcaggtgaggagtgatttttgtttatcttca
tgtagtgaacattattgttataaattttacatttactga
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