Tachysurus fulvidraco (yellow catfish): 113650561
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Entry
113650561 CDS
T08119
Symbol
sharpin
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1
KO
K20894
shank-associated RH domain-interacting protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04217
Necroptosis
tfd04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
113650561 (sharpin)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
113650561 (sharpin)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113650561 (sharpin)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
113650561 (sharpin)
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Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
PH
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
113650561
NCBI-ProteinID:
XP_027014781
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All DBs
Position
1:complement(43256365..43267371)
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AA seq
455 aa
AA seq
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MSLSSGVWAPVFPSPSLQQSSSSGCSTVLMSVRVSVSRGTLRPFSSPGAVDDDASLRLQL
SMDPNRPGEFRLTVRDSGSNGRITSLAEFELRAVRYEIKSPRCHELCVIKPPHDTLVFTF
RSEQEAQEWATVMISSLREAHRVAGIASHPTDDSVPYLKPVEQSAALSLSAKEELCADLA
RAIKAGDAQEAMQHATSLAHQQMALTIQPAEKDPEDEEISLAVAVEDATSSCCVTVKVAP
HMTVASLKQQMFAEYGFHPRVQCWVIGQCLCSEQRSLVSYGVCRDGDTAFLYLLSARHAS
LSRLQCQQDQESALLAPAPKPAPTPAPLSHDWRGYSTLPPRLHHANAGSSGGGAGKHSIG
DIMNLERLQLRGPGVRPTNTQLRIRGLAQGSRCTSLAVVGFEHETCSLTSSPQLGWSCPS
CTFINKPTRPGCEICSTERPARLELSASEEAALLL
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgagttcgggtgtttgggctccggtgtttccgtcaccgtcgttacagcagagc
tcgagctcgggttgcagcacggtactgatgtcagtgcgcgtgtcggtgtcacgagggacg
ctgcggccgttcagctcccccggtgccgtggatgatgacgcgtctctccgtctgcagctc
agcatggacccgaaccggcccggagaattccgcctcaccgtcagagactccggcagtaac
ggcaggatcacgtctctggcagagttcgagctgcgtgcagtgaggtacgagatcaagtca
cctcgctgccacgagctgtgtgtcatcaagccgccgcatgacacgctggtcttcactttt
cgcagcgagcaggaggcccaggagtgggccactgtcatgatctcatcactgagggaagcc
cacagagtcgccggcattgcctctcatcccactgatgactcagtaccttacctgaaaccc
gtcgagcagagtgcagccttgtcattatcagcaaaagaggagctgtgtgctgatttggcc
agagccattaaagccggagacgctcaggaagcaatgcagcacgctacatccctagcacac
cagcagatggcactcaccatccagccagctgaaaaggaccctgaagacgaagagatcagc
ttagcagttgctgttgaagatgccacgtcttcctgttgcgtcacggtgaaagtcgccccc
cacatgactgtagcgtctctcaagcagcagatgtttgctgaatatggttttcacccacga
gtgcagtgctgggtcataggtcagtgtttgtgctccgagcagcgctctctggtgtcgtac
ggcgtgtgtcgagacggagatacggcatttctctacctcctctcagcgcgccacgccagc
ctcagccgactgcagtgccagcaggaccaggagagcgccctcctcgcacccgcgcccaaa
ccagcaccgaccccggcaccactcagccacgactggagaggatacagcacgctgcctccc
cgactacatcacgccaacgcaggaagcagtggtggcggagctgggaagcatagcatcggt
gacatcatgaacctggagagactgcagctgcgtggacccggagtgagaccaacaaacaca
cagttgagaattcggggccttgctcaaggatccaggtgtaccagcttggcagtggtggga
tttgaacatgaaacctgtagtctaacatcctctcctcagctgggttggtcgtgtccttca
tgcacgttcataaacaaaccaacgaggcccggctgtgaaatctgcagcacagaaagaccc
gctcgtctggagctcagcgcgtccgaggaagcggctcttttgctctaa
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