Tachysurus fulvidraco (yellow catfish): 113653568
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Entry
113653568 CDS
T08119
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04140
Autophagy - animal
tfd05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113653568 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113653568 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113653568 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tfd04990
]
113653568 (plekhm1)
Membrane trafficking [BR:
tfd04131
]
SNARE
SNARE associated proteins
Others
113653568 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
tfd04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
113653568 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_13
Zn_ribbon_RRN7
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
113653568
NCBI-ProteinID:
XP_027019038
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All DBs
Position
8:24407695..24422241
Genome browser
AA seq
1007 aa
AA seq
DB search
MLATQLADSVQEAKNVKQWIKEKIAQTLKSLQKRYVTTDAPVTSEDSEANQLCCALEAVF
IHGLRSKHIRTDGAGARNRKGGSLPQPVFWNLLKTITHRDVILELEGLSFINSDVGRCRA
WVRLALNDGLLECYLTSLLRESTKLGAHYQPGALLLDPEEREVLLSLLQGLASLAFQLSY
KSAVLNEWTTTPLALAGLCPLLPNDDLCPPASRRESWDTASQSSGSGGSGRGQVGRTASD
LSLDTAGSCHLSSSFGSEKESWSLQTENKSPTEEMSISSSQDIIKDLDVLSPATDSMNES
SIPSSSDDDSSSKRDRNQMLEPPVELSVPHAVVLEDVSSEEELAEHLTALVTRRPTKDLA
ESCVVEDRKQDGEESPAILFDTTTPVLACQVTSDSSDPSNRTNLDHASVHHNGSSNALSV
KTSAGSVSSHHVSQKSQSWISDEDIYKPDTYASGDSEESDAIESTQVNGIVSADAGPESH
PSPPSVVRRRQIGLSNPFRGLLKLGQLERRGPVGLWRACHCELSPFELRLYADDEERNIC
ENRSLLRCETVHLGADGRFHLEFPGKRLHLRAPSKAEAEDWVERINEAVSNLRQEPQEDW
DDLSNSVTPASSPAEPSSLPETDWSRPCEPEPDAIKETVVGLSRDEQGWCLIVLSLSLEA
LQGFLMQDGCKTHLFCHGVDAVRDVVPAVALGGPAFFKVLTAKETLTMQAENGEQARSWR
SLIRRALDSYLEDENETGGKLTSLSGGNVHRLVQHRLKDDGVLLPFLTVVPNEKGLNAQN
FKCAGCPRQIGVSLGRARLCEFSGQYYCDSCHQGDITIIPSRMVHNWDLRAREVSRQAMK
LLTDIEQEPLIDLDVLNPDLFDHTDTMARVQCFRQRLRLLGDYLLICRSGIQKKIQARLQ
QRTYLLESSHLYSVLDFRQIADNQYESFLQSVVQFSCNHVQHCDLCTQRGFICQICNADD
IIFPFQFDTTSRCKACKSVFHSSCKAQSVGCPRCERLQRYKERDHLE
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgactcaactcgctgactctgttcaagaggccaaaaatgtcaaacagtggatc
aaggagaagatagcacagaccctgaagtcactgcagaagcgctacgtgaccacggacgcg
ccggtgaccagcgaggactcggaggccaaccagctctgctgcgctctggaagccgtcttc
attcacggcctccgcagtaaacacatccggacagacggagcaggagcacgtaaccgcaaa
ggaggctctcttcctcagccggtcttctggaacctgcttaaaaccatcactcacagagat
gtgattctggagctagagggtttgagcttcatcaactcggacgtaggccggtgccgagca
tgggtgcgtttggctctgaacgatgggctattggagtgctacttgacgtcacttctccga
gagagcaccaagctgggggcccactaccaacccggagcactgctccttgaccccgaggag
cgtgaggttctgctcagtcttctgcagggcttagcctcgcttgctttccagctttcctac
aaatctgcagtgctcaatgagtggaccaccacaccgctggcactcgctggtctatgtcca
cttctgcccaacgatgacttgtgcccccctgcttcacgccgggaatcttgggatacagct
tctcagtcatctggatccgggggctctggccgaggtcaggtaggcaggacggcctcggat
ctcagcctggacaccgccggttcttgccatctctcttccagcttcggctcagagaaagag
agctggagcctccaaacggagaacaagagtccaactgaagaaatgagtatctcctccagc
caggatattataaaagacctcgatgtgctcagcccagctacagacagcatgaacgagtcc
tcaattcccagcagcagtgatgacgactcgtccagcaaacgggatagaaaccagatgctc
gaacctcccgtggagttgtccgttccccatgcagtcgttttggaagacgtatcttcagaa
gaagaactcgcagagcatttgaccgcccttgtaactagaagaccaacgaaagatcttgcg
gagtcttgtgtggtagaagatcggaagcaggatggagaagaatctcctgccattttgttt
gacaccaccacccccgtgttagcctgtcaggtgacttcagactcgtcagatcccagcaat
cgtacaaacctggaccatgcttctgtccatcacaatggttcatctaatgctctgagtgtt
aaaacgtctgcaggctctgttagttctcaccacgtttctcagaaatcccagtcctggatc
tccgacgaggacatttacaagccggatacttatgcaagtggcgattctgaagagtctgat
gctattgagtccacccaggttaatgggattgtgtctgctgatgcgggacccgaatcccac
ccgtctccacctagtgtggtccgtcgtagacagatcggcttgtcaaacccattccgaggt
cttctaaagctgggccagctggagcgccgtggtcctgtgggtttgtggcgtgcgtgccac
tgcgagctgtcgccgtttgagctgcgcctatatgccgacgacgaggagcgtaacatctgt
gaaaaccgctcgctgctgcgctgtgagactgtgcatctgggcgccgatggccggtttcat
ctcgaattccctgggaagaggctccacctgcgggcgccgagcaaagccgaggccgaagac
tgggtagagcgcattaacgaggctgtgagcaatttacgacaggaaccacaagaagactgg
gatgacctctcaaactctgtcacgcctgcgtcttcgcccgccgagccgtccagtctgccg
gagactgactggagcaggccctgtgagccggaaccagacgccataaaggagactgtagtg
ggcttgagccgagacgagcaagggtggtgtctgatagtgctgtctctttcactggaggcg
cttcaggggtttttaatgcaggacggatgcaaaacgcatcttttctgccatggcgtcgat
gctgtgagagacgtagtacctgctgtggccctgggaggccccgccttcttcaaggttctg
acagcgaaggagacactaacgatgcaggccgagaatggcgagcaggcgcgttcctggagg
agccttatccgcagggctctagattcatacctggaggatgagaacgagacaggaggcaaa
ttgacgtcgctgagtggaggcaacgtccacagacttgttcagcacaggcttaaggatgat
ggcgtgctgctgccctttctgaccgtggtccctaatgaaaaagggctgaatgcacagaac
tttaaatgtgcaggctgtcccaggcagattggtgtatctttaggacgagccaggctgtgt
gagttctcaggtcaatattactgtgatagctgtcaccagggtgacatcacaatcatccct
tctcgcatggtgcacaactgggatctcagagcacgtgaggtctccaggcaggccatgaag
ctgctgaccgatattgagcaggagcccttaatagaccttgatgtgttaaatcctgacctg
tttgatcacactgacaccatggcaagagtgcaatgcttcaggcaaagactccgtctcctt
ggagattacctgctcatttgtcgcagtggaatccagaaaaaaattcaggccaggttgcag
cagaggacctacctactggaatcaagtcatctatatagtgttctggatttcaggcagata
gcagacaaccagtacgagtcctttctgcagtctgtcgtccagttctcatgcaaccatgtg
caacattgtgacctctgcacacagcgagggttcatctgccagatctgcaacgcggacgac
atcattttccctttccagttcgacaccacctcaaggtgtaaagcatgcaaatctgttttc
cactcgtcctgcaaagcccagagcgtcggttgtcctcgctgcgaacgtctgcagagatat
aaggagcgagaccatctggaataa
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