Tachysurus fulvidraco (yellow catfish): 113653572
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Entry
113653572 CDS
T08119
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like isoform X1
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113653572
Ion channels [BR:
tfd04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113653572
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
113653572
NCBI-ProteinID:
XP_027019043
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Position
8:complement(24172524..24196360)
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AA seq
1244 aa
AA seq
DB search
MFGKEAQRGDVQMSKSEKDQSWITSVIKKRVCTTFVEDSFSNGRLCQCGSSRESHASVTL
NDYFSTAIVSHWESSQHTSESPTDAYGEVAFAGARKRHSYFLRLSWDTPSATVYSILTSH
WDLQPPNLVVSVAGGGGKSKVKTWVKEVLRQGLVRAAQSTGAWILSGGLREGVGRHIGEA
VRDHSMAASSDSLSKVVAIGVAPWGLVSNREQLINPEGSFPAEYYVPNMSRDSCYLDNNY
HAFLLVDDGSVGHRGVEARFRGRLENYLSQQRTGKSGSGSMDIPVLCMLVSGEPYMLERM
NLSLKKSLPWLVLAGSGGLADLVSDVLENVSAAKSKPGTGSEGEAEAATKTDLRGRVTER
VLKHFPSEQDTEKLVDKVLSIYQSKDLISIYHDEHEGLDDFDTVLLKALVKANKQRLSAD
AVPNTEELRLAVTWNRADIAKSELFTGNIQWKKEDLEGFMTDALVNDKPQFVRLFTENGL
NIIDYLTNARMEDLYRSISEGSTIYTLLQRYLLERLGAANSSRSGGSVEHTVSPVKQVTM
YEVSQVLQYLLGDVCRPFYYKCLELKGVASRRKANKKMSTILHEEARYLALRCTHPWASL
FIWAVLQNRSNMAVYFWEMTSESVLSALSACKLLRVLSKLETETETKHSMKDLAQRFESL
AHGLFSKCYENSESRSFILLKKKSQVWKGATCLRMAMEADARLFFSHDGVQSLLSQIWWG
DMDKNTEVWKLILTLFVPPVCYTNLISFREENDVDESSEDVSQRKEIDWLYAETVFSFSD
MNRIQAKAEDLTPVRRSIKGYPVRTVRPKLPFVFSRWRQFWYAPVTAFLGNVLMYFLFLL
LFAYVLLMDFKPPPPRGPAFWELLLYFWVFTIVCEEIRETSIMGNMTFKQRIRQYAQDVW
HKCDLIAIFLFLTGVCCRMFKKTYWLGRAALCLDYMVFTLRLIHIFAIHKQLGPKIIIVG
KMMKDMFFFLFFLAIWLLAYGVANQALIYPYDSSADRILRRVFYRPYLHIFGQIPVEEID
SGYSWDINCTDNATLIKAGTEPCREAYHNWLVVILLVIYLLVTNVLLINLLIAMFSYTFN
KVQERSDTYWKFQRYKVIVGYHSRPCLAPPFIIISHIHIFIKRNIRKVPSEKVHQFAVDL
KEKANNRLMTWENIQKEKFLSAEGKKLKGSDTERLKRMSVKVDTVLKQTTEISDLDRRLR
TLECEMEFCSSTLLWMAEALSQSGALKSTKPLPTRKVNPSTPEM
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtaaagaggcgcaacgtggagacgtccaaatgtccaaatccgagaaagaccag
agctggattacgtctgtaatcaagaaaagagtttgtacgacgtttgtggaggattccttc
agcaacggtcgcctgtgtcagtgcggaagttcgagggaaagccacgcgtcagtcactctg
aatgattacttcagcacggccattgtcagtcactgggaatcttctcaacacacgtccgag
tctcccacagatgcttacggagaggtggcgtttgcaggagccagaaagaggcacagctat
tttcttcgtctttcttgggatactccatctgccactgtttactccatcttgaccagccat
tgggacttgcaacctccaaacttggtggtgtcggtggccggtggtggtgggaagtctaag
gttaagacctgggtgaaagaggttctaaggcagggattggtcagagcagcccagagcaca
ggagcatggatcttatcgggaggactgcgggagggtgttggcaggcatataggcgaagcc
gtgagggatcattctatggcagcgtcctcagattccctctccaaggtagtggccataggt
gtagctccctggggtttggtatccaaccgagaacaactcatcaacccagagggtagtttt
cctgctgagtactacgttccgaacatgtcccgagattcctgctacctggataacaactac
catgcatttctcctcgtggatgacgggagtgtaggccacagaggtgtggaggctcgtttc
agaggacggctagagaactacctttctcagcagcgcacaggaaaatctggaagcggaagc
atggacatccctgtgctgtgtatgctggtatcaggagagccttacatgctcgagagaatg
aatctctccttgaagaagtctctcccctggttggtcctggcaggctctgggggactcgct
gacttggtaagcgacgttctggaaaacgtatcggctgcaaagagcaagcctgggacaggg
tccgaaggcgaagcggaggcggctactaaaacagatctgcgagggagagtaacagagaga
gtgctgaaacactttccctcagagcaggacactgaaaaactcgtagacaaggtcttgagt
atctaccagagcaaagacctgatctccatttatcatgatgagcacgagggattggacgac
tttgatacagtgctgctgaaggctttagtcaaggcgaataagcagcgcctttctgctgat
gctgtccccaataccgaggagctcaggctggctgtgacctggaacagagcagacatcgcc
aagagcgagctcttcacaggaaacatccagtggaagaaggaagacctggagggcttcatg
actgatgctctggtgaacgacaagcctcagtttgtacgtctttttaccgaaaacgggttg
aacattatagactatcttacaaacgcccgcatggaggatctgtaccgctccatctcagag
ggctctacgatctacacactgctacaacgttacctcttagaacgcctgggggccgccaat
agctctcgctccggtggcagtgttgaacacaccgtcagcccagtcaaacaagtgacaatg
tatgaggtgtctcaggtcctacagtacttgctgggtgacgtgtgtcggcctttctattat
aaatgtctggagctgaagggtgtcgcttccagacggaaagccaacaagaaaatgtctacg
atcttgcatgaagaagccagatatctggcgcttcggtgcactcacccgtgggcttcactg
ttcatctgggccgtgctgcagaaccgcagcaatatggccgtttacttctgggaaatgacc
tcagagtcggtattgagtgctctgagtgcttgtaagctgctgcgagttctctccaaatta
gagaccgagactgagacgaaacactccatgaaggacctggcccagagatttgagagcttg
gcccacggtttgttcagtaagtgctacgagaacagcgagagtcgctctttcatcctgctg
aagaaaaaatcacaggtctggaagggcgctacatgtctgaggatggccatggaagcggat
gctcgtcttttctttagtcacgacggcgtgcagagtctgctgtctcagatatggtggggg
gatatggacaaaaacactgaggtctggaagctcatcctcacactgtttgttcctcctgtc
tgctacaccaacctgatctctttcagagaggagaacgacgtggatgaaagttccgaggac
gtgtcgcagcgcaaggaaatcgactggctctacgcagaaacagtcttctccttctcagac
atgaatcgcattcaagccaaagcagaagacttaactcctgttagacgaagcataaaaggt
tacccggtcagaaccgtccgtcccaaactgccttttgtgttttcacgctggagacagttc
tggtacgcaccggtcacagccttccttggcaatgtgctgatgtacttcctcttcctgctt
ctgtttgcctatgtgctattgatggatttcaagcctccacccccgagaggcccggccttc
tgggagctcttgctgtatttctgggtgttcaccattgtgtgtgaggagattcgagagaca
tccattatgggcaacatgacatttaagcagaggatacgacaatatgctcaggacgtctgg
cacaaatgtgacctcattgccattttcctctttcttactggcgtgtgctgcaggatgttc
aagaaaacgtattggctcggccgtgctgccctgtgcctcgactacatggtgttcaccctg
agacttatccacatcttcgccattcataagcaacttgggccaaaaattatcatagtgggc
aaaatgatgaaagacatgttcttctttttgttcttccttgccatatggttgctggcctac
ggagtggccaatcaggctctgatctacccctacgactcgagtgctgacaggatcctccgc
cgtgtattttacagaccatatttacacatttttggacaaattcctgtggaggaaattgac
tctggatatagttgggatataaactgcacagacaatgcaacactaattaaagcaggtaca
gaaccgtgtagagaagcatatcataactggcttgtggtcatcttactcgtcatctacctt
ctggtcaccaatgtcctgctcattaacctgctcatcgccatgttcagttacaccttcaac
aaagtgcaagaacggagtgacacgtactggaagttccagcgctacaaagtgatcgtgggg
tatcattctcggccgtgcctcgctccacccttcattatcatctcccacatccacatcttc
atcaagcggaacatccgcaaggtgccatctgagaaggtgcaccaatttgctgtggactta
aaggaaaaagccaacaaccggctaatgacttgggagaacattcagaaggagaaattcttg
tctgctgagggaaagaagttaaaaggaagtgacacagagcggctaaagcgaatgtctgtc
aaagttgacactgttctcaaacagacaaccgagatcagtgatttggatcgcaggttaaga
accctcgagtgtgagatggaattctgttcgtctactcttctatggatggccgaagctctc
tctcaaagcggtgcactaaaatccacgaaacctcttcccacccggaaagtaaatccatcc
acacctgagatgtga
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