Tachysurus fulvidraco (yellow catfish): 113653598
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Entry
113653598 CDS
T08119
Symbol
irf3
Name
(RefSeq) interferon regulatory factor 3 isoform X1
KO
K05411
interferon regulatory factor 3
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04620
Toll-like receptor signaling pathway
tfd04621
NOD-like receptor signaling pathway
tfd04622
RIG-I-like receptor signaling pathway
tfd04623
Cytosolic DNA-sensing pathway
tfd05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
113653598 (irf3)
04621 NOD-like receptor signaling pathway
113653598 (irf3)
04622 RIG-I-like receptor signaling pathway
113653598 (irf3)
04623 Cytosolic DNA-sensing pathway
113653598 (irf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113653598 (irf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113653598 (irf3)
04131 Membrane trafficking [BR:
tfd04131
]
113653598 (irf3)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
113653598 (irf3)
Membrane trafficking [BR:
tfd04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
113653598 (irf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
113653598
NCBI-ProteinID:
XP_027019090
LinkDB
All DBs
Position
8:complement(24209473..24219535)
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AA seq
459 aa
AA seq
DB search
MAQPKPLFIPWLKQQIDSGRYPGVQWVNQECTKFSIPWKHALRQDSNSDDILIFKAWAQT
SAGSNGQTQGDSSVWKRNFRSALRARGFQMVKDNKNDTANPHKIFAWPDDSQSGASTDDS
PVCNTEISYGGVLYLGEEELFPGGSARDDLLQRCLEDLNIVETPPEMPSDQQVFVSEPTS
TAYCNGPFPIQETLSMHHLSQADVSAGQLSPAEGTLSHSHYSPPDGAFIGTQQPTVQAEL
EPRLPVQSASDDPGSNRLDTHFKVNVYYRGRRVLNQVVENEDGFRLMFRNDPNLMASPLP
VVQLPTTESILDRAQAQSTQSILDNLGGLEVRREDGMLLGYRWGDSRVYWGLDKHEKSPA
SRQLSKNQPEPIYSFRDFIYGLIEFMNNRGPSPSYSLYFFLGQQWPDPKNKPWEKKLIMV
EVILTALENLKELAAVHGASSLQSSMELQISLEQMMEFC
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcccaaaccactattcattccttggttgaagcagcagattgatagcggacga
taccccggcgttcagtgggtcaaccaggaatgcacaaaattcagtattccttggaagcac
gctttgaggcaggactcgaacagtgatgacatcctcatattcaaggcatgggcacagacg
agcgctggctccaatggacagacccaaggcgacagctcggtgtggaaaagaaacttccgc
agtgctctcagagcccgaggattccagatggtgaaagacaacaagaatgatactgcaaac
cctcataaaatcttcgcgtggccagatgacagccagtctggcgcatctactgacgactcc
ccggtgtgtaataccgaaatttcctacggtggtgtcctgtacctgggagaagaagagctg
tttccaggtgggagtgcgcgcgatgatttgctgcagcgctgcctcgaggatctgaatatt
gtcgaaactccaccagagatgccttcggatcagcaggtcttcgttagcgaaccgactagc
acggcttattgcaatggtccatttcccattcaggaaactttgagcatgcatcacctttct
caagctgatgtcagcgcaggacagttatctcctgctgaaggcactttatctcattcccac
tattctccaccagatggcgcattcataggcacgcagcagcccacggtgcaggctgaactg
gagccacgacttcctgtgcagtccgcttctgacgacccaggctctaaccgtttggataca
cattttaaggtgaacgtatattacagaggaaggcgggtgttaaatcaggtggtggaaaac
gaggacggtttccgtctgatgttcaggaatgaccctaacctaatggcaagcccgctccct
gttgtgcagctccccaccacagagtctatactggaccgggcccaggcccagtccacccag
tccattttggataatctgggtgggttggaggtgaggcgggaggatggcatgctgttgggt
tatcgttggggagacagtcgtgtttactggggactagacaaacacgagaaaagccctgcg
tccagacagctctcgaaaaaccagcccgaacccatctattcctttagagacttcatatat
ggcctgatagagtttatgaataaccgtggaccatctccttcatactcgctctatttcttt
ctgggacagcagtggcccgaccccaagaacaaaccctgggagaagaagctgatcatggta
gaggtgattctcactgctctggagaacctgaaggagttggctgcggtacacggcgcatcc
tcgctgcagtcatctatggagttgcagatttccttagagcagatgatggaattctgttag
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integrated database retrieval system
