Tachysurus fulvidraco (yellow catfish): 113653605
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Entry
113653605 CDS
T08119
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd00514
Other types of O-glycan biosynthesis
tfd04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
113653605 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113653605 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tfd01003
]
113653605 (rfng)
Enzymes [BR:
tfd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
113653605 (rfng)
Glycosyltransferases [BR:
tfd01003
]
Glycan extension
O-Glycan
113653605 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
113653605
NCBI-ProteinID:
XP_027019099
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All DBs
Position
8:23551219..23558743
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AA seq
358 aa
AA seq
DB search
MHLPPVGTNRRCFLASSAFCAVVLLLIPTLQTPQRQGKLPRPLPHTRPTRGENTTYYKGA
SNSKPSSDKSQRDSVSADFHSSRAKEPLAMKDIFIAVKTTRKYHKSRLELLFQTWVSESS
EQTFIFTDGEDKELKKKAGGNVINTNCSAAHTRQALCCKMSVEYDKFIESQKKWFCHVDD
DNYVILPSLLQLLSTYSHTQDVYLGRPSLDHPIEAPERVRSDGSTSVKFWFATGGAGFCI
SRGLALKMSPWASLGNFITTAEKIRLPDDCTIGYIIEALLEVPLVHTDLFHSHLENLQRM
PAEDILKQVTLSYGGFENRRNVIPVAGAFSLTEDPSRFKTVHCLLYPETEWCHRSSHR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgcctccggtcggcacgaacaggcgttgtttcctggcctcttcggctttctgt
gctgtcgtgctgctgttgatcccaaccctccaaacgccacagcggcagggcaagctgcct
cgacctctgccccataccaggcctacaaggggagaaaacaccacgtactacaaaggtgct
agtaactccaagcccagcagtgacaaatcccaaagagactcagtcagtgctgacttccac
agttcacgagccaaggaacctttagcaatgaaagacatttttattgcagtcaaaaccacc
aggaagtatcacaaatcacgtctggagctgctttttcagacctgggtgtcagaatccagc
gagcagacattcatcttcaccgatggtgaggataaagagctgaagaagaaagcaggaggc
aacgtcatcaacaccaactgctcagccgctcacacacgccaggcgctgtgctgcaagatg
tctgtggagtacgacaagttcatcgagtcacaaaaaaaatggttctgtcacgtggacgac
gataattacgtcatcctgccgagtctactgcagctgctctcaacctattcccacacgcag
gatgtgtacctgggccggccgagtctcgatcaccccatagaggctcccgagagggtcagg
agcgatggatcgacctctgtcaagttctggtttgctaccggtggcgccggtttctgtatc
agtcgaggcctcgcgctcaagatgagtccatgggcaagtctggggaacttcatcactaca
gcagagaagatccgtctcccggatgactgcacgatcggttacatcatcgaagcgctgctg
gaggttcctctggtacacaccgacctcttccactcacatctggagaacctgcagaggatg
cctgctgaggacatcctcaaacaggtcaccctgagctacggcggtttcgagaacaggagg
aacgtgatacccgtcgccggagcgttctccttgaccgaagacccttcacgatttaaaacc
gttcactgcttactttatcctgagactgaatggtgtcaccgtagcagtcatcgctga
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