Tachysurus fulvidraco (yellow catfish): 113654530
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Entry
113654530 CDS
T08119
Symbol
rapgef4a
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04081
Hormone signaling
tfd04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
113654530 (rapgef4a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
113654530 (rapgef4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113654530 (rapgef4a)
Membrane trafficking [BR:
tfd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
113654530 (rapgef4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
Motif
Other DBs
NCBI-GeneID:
113654530
NCBI-ProteinID:
XP_047671084
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All DBs
Position
6:complement(15098498..15136937)
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AA seq
1014 aa
AA seq
DB search
MISPKMVAAHTSAHSSASSEWVACLDKRPEERSGEDVDIIMARLKRVKAFEKFHPTMLQQ
ICLCGYYECLEKGITLYRQGDIGTSWYAVLSGSLDVKVSETANHQDAVTICTLGIGTAFG
ESVLDNTPRHATIVTREFSELLRIEQREFRSLWEKYRQCMAGLLAPPYGAMESGTSADRM
PDKENLGNSLGSVSRHLNKVPSEKILRAGKVLRNAILTQAPHMIRDRKYHLKTYKRCCVG
TELVDWQMQQSSCVHTRVQAVGMWQVLLEEGVLNHVDQELNFQDKYLFYRFLDDEQDDAP
LPSEEEKKESEEELQDTLLFLSQMGPDAHMRMILRKQPGQRTVDDLEIIYEELLHIKALS
HLSTTVKRELAGVLIFESHAKAGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEG
DDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHEADVLVLE
KSNIRSSSHAGSSPLKYTVMSGTPEKILEHFLETMKLDSKYSESGTFITNPALDDFVLMH
CVFIPNKQLCPLLMAHYQSQASQGSDQERLDYALNNKRRVIRLVLQWAAINTPHLQEEES
SLAFLQDFYMAVSEDAKLIPALKDQLPELETILKKNSDDANPSQKKHKVLLRQFSMGDEK
LQKRQSIKSTDEILFKVYCSDHTYTTIRVPVSASVREVVSAVSDKLGSQDDLLLVHLSSS
GEKVVLKPNEVSIFSSLSVNGRLFVCSREQINSLTPLPEQEGPSAGSMTTLELMSSKEVA
YQMTLYEWELFNCVHEHELIFHTFGRQHFKKATANLDLFLRRFNEIQLWVVTEVCLCSTL
SKRVQLLKKFIKIAAHCKEFKNLNSFFAIIMGLSNPAVSRLIQTWEKLPSKFKKVYAEYE
NLMDPSRNHRAYRLTVAKLDPPIIPFMPLLIKDMIFTHEGNKTFVDSLVNFEKMRMIANT
VRIIRYCRSQPFNYEAPQATKNHQDVRLYVRQISVIDNQRTLSQLSHKLEPRRP
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgatctctccaaagatggtagcagctcacacctctgctcattcctcagcatcttcagaa
tgggtagcctgtctcgacaagcgaccagaagagcgttctggggaagatgtggacattatt
atggcacgtctgaagcgcgtgaaagcttttgagaagttccaccccaccatgttacaacag
atatgtctatgtggctactatgagtgtctggaaaaaggcatcacattgtaccgacagggt
gatatcggcactagttggtacgctgtcctctctggatcgctcgatgttaaagtctctgaa
actgccaaccatcaggatgcagttaccatttgcacactgggcatcggcacagcattcggg
gagtccgtgttggacaatacaccgcgtcatgccacgattgtaactcgagagttcagtgag
ctgctgcgcatcgagcagagggagttcagaagcctgtgggagaagtatcgtcagtgcatg
gctggtctcctcgcccctccctacggtgctatggagagtgggaccagtgctgacagaatg
cctgacaaagagaatctgggtaactccctaggatcagtgtccagacacctgaataaggtt
ccatctgagaagatcctgcgggcgggtaaagtgctgaggaacgccatcctcacccaagca
cctcacatgatccgagacaggaaataccacctaaagacttataagcggtgttgcgtaggc
acagagctggttgactggcagatgcagcagagttcctgtgttcacacgcgggttcaggct
gttgggatgtggcaggtgttgctggaggagggagtactcaaccatgttgatcaggagctg
aatttccaggataagtacctgttctatcgcttcctggacgatgagcaggatgatgcacca
ctccctagtgaagaggaaaagaaagagagcgaggaggaactacaggacacacttcttttc
ctgtctcagatgggcccagacgcccacatgcgcatgatccttcgaaaacagcctggccag
aggacagtagatgatttagagattatttatgaggaactgctacatataaaagccttatct
cacctttctacaacagttaaaagggagttagcaggcgtcctcatttttgagtcccatgcg
aaagcaggaacagtgttgtttaatcagggagaggagggaacctcatggtacatcatccta
aagggttcagttaatgtggtcatttatggcaagggtgtggtttgcacactgcatgagggg
gatgattttgggaagctcgctctggtaaatgatgcaccgcgtgcagcctctattgtcctg
cgagaggacaactgccacttcctgagggtggacaaagaggattttaacaggatcctcagg
gatgtagaggcaaatacagtgcgtttgaaggaacatgaagcagatgttttagttctggaa
aagagcaacatcagaagctccagccatgcaggctcctcaccacttaaatacactgtgatg
tctggaactccagagaagattcttgaacatttcctagagaccatgaaactagattccaag
tattcagagtcaggtacattcatcacaaatccagcgttggatgactttgtgcttatgcac
tgtgtatttattcccaataagcaactctgtccacttctcatggcccactaccagtcgcag
gcatctcagggcagtgatcaggagaggctcgactacgctctgaataacaagcgcagagtc
attcgtctggtgctgcagtgggctgccattaacaccccccacctgcaggaggaggagagc
tctctggccttcctccaggatttttacatggcagtttctgaagatgccaaactgattcct
gcactcaaagatcagctccctgaactggaaactatcctcaaaaagaattcagatgatgcg
aatccctctcagaaaaagcacaaagtgctccttcgacaattcagcatgggagatgagaaa
ctgcaaaaacggcagtcaatcaaaagcacagatgagattctgtttaaggtgtactgtagc
gaccacacttacaccaccatccgagtgccagtgtctgcctctgtaagagaagttgtgtct
gcagtatcagataaactgggttcacaagatgatcttctcctggttcaccttagctcatct
ggtgaaaaagtggttttgaagcccaatgaagtgtccatcttctcctctctcagtgtaaat
ggtcgtttgtttgtatgctccagagaacagattaactctttgactccactaccagagcaa
gagggaccatctgctggctccatgaccacccttgaactaatgagctcaaaagaggtggcc
taccagatgaccctttatgaatgggaactcttcaactgtgtgcatgagcacgagttgatt
ttccatacatttggtcggcagcactttaaaaaggcgacggcaaatctagatctctttcta
cgccggttcaatgagatccagctgtgggtggtgacggaggtgtgcctctgctccaccctc
agtaaacgtgtccagctgctcaagaaattcatcaagatcgctgcccattgtaaagagttt
aagaatttgaactcgttctttgctattattatgggattaagtaatccagcagtcagccga
ctcattcagacatgggagaaacttcccagcaagttcaagaaggtttatgcagagtatgag
aacttgatggacccctctaggaaccacagagcataccggctcactgtggcaaaactggac
cctcccatcatccctttcatgcctttactcatcaaagatatgatttttactcatgagggc
aacaagacatttgttgacagtttggtgaactttgagaaaatgcgaatgattgccaacaca
gtccggataataagatactgcagaagtcagcccttcaactacgaagctcctcaagctacc
aagaaccaccaggacgttcggctctatgtgcgacaaatcagtgtgattgacaaccaacgt
actctgtcccaactttctcataagctggagccccgacgcccctga
DBGET
integrated database retrieval system
