Tachysurus fulvidraco (yellow catfish): 113657684
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Entry
113657684 CDS
T08119
Symbol
traf5
Name
(RefSeq) TNF receptor-associated factor 5
KO
K09849
TNF receptor-associated factor 5
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04217
Necroptosis
tfd04621
NOD-like receptor signaling pathway
tfd05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
113657684 (traf5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
113657684 (traf5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113657684 (traf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113657684 (traf5)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
113657684 (traf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-TRAF_2
zf-RING_5
zf-rbx1
zf-RING_6
DUF1664
TRAF3_RING
EzrA
RING_XB3-XBAT31
HJURP_mid
CCDC93_CC
Occludin_ELL
CorA
DUF5054
DUF5955
MT
Motif
Other DBs
NCBI-GeneID:
113657684
NCBI-ProteinID:
XP_027025409
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All DBs
Position
2:complement(28270694..28281226)
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AA seq
550 aa
AA seq
DB search
MAAEENECLSLQLSKQSSDPVRSWELESVLANRTLSFVSRLEERYMCPACGDAILNPHQT
GCGHIFCAKCIRTFIESRDTSKCPLDGILIKSEEVFQDNCCKRELLNLEVYCSNTPDCTQ
KVPLCNLQKHLTLCQYETLQCSNPGCTDILLRKNVPDHQRNLCQFRTEFCHYCTKPYPIT
QLQDHEQMSCPEADVQCPNNCSQMVKRHKLKGHIDECPEVETDCIYKQYGCTVRDKRSKV
KVHEYTEFSHHVLLVLESNSKLAKQVDQLQQDLALQERELKERNLLVANLNREMTKCDSA
FSAIQRSVVEQRESVSSVKQELQELRNVLDAELAKEELSDLRASLDSLRQQVAMTQSLRD
HLGALGQTCQRHTRLLDIHVEQLQCNEQRFRQLESTSYDGKLIWKILDYQRRKDAGAPLT
SPPFYTGRSGYKLSARAYPDGDGSARGTHLSLYIMVMRGDFDSLLPWPFRQSVTLTVLDQ
SGSRNHVSCSFTPDTSKESFRRPTADSNAALGFSRFISHTDLEGPRNAIFIRDDTLFVKV
KVDTTGLEDL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgaggagaatgaatgcttgagcctccagctctcaaaacagagctctgatcct
gtgaggtcgtgggagttggagtctgtcctggccaatcgcacactcagttttgtgtcccgg
cttgaggagcgctacatgtgcccggcctgtggtgacgccattcttaacccccaccagacg
ggctgtggccacatcttctgtgccaagtgcattagaacgtttattgagagccgcgacaca
tccaaatgtcccttagatggcattttgatcaagtctgaggaggtttttcaagacaactgc
tgtaaaagagaactactaaatcttgaagtttactgtagcaacactccagattgcacacaa
aaagtgcctctgtgtaatttgcagaaacacctaactctttgtcagtatgagaccctgcaa
tgctccaaccccggctgcactgacatcctgttacgcaagaatgtaccagaccaccagcga
aacctgtgtcagtttcgcacagagttctgtcactattgcacaaagccataccctattacc
cagctccaggaccatgaacagatgtcatgccctgaagcagacgttcagtgtcccaataac
tgctctcagatggttaagaggcataagctcaaaggacatatagatgagtgtccagaagtg
gagacagactgtatttataagcaatatggctgcacagtccgagataaacgaagcaaagtg
aaagtccatgaatacactgaatttagccatcatgtgctacttgtactggagagcaacagc
aagcttgctaaacaggtagaccagctgcagcaggacttggccctccaggagagggagctg
aaagagagaaacttgcttgttgctaaccttaacagggagatgaccaagtgtgacagcgca
ttttctgcaattcagaggtcagtggtggagcagagggagagcgtctcaagcgttaaacag
gagctgcaggagttgcgtaatgttctggatgctgagctggctaaagaggagctgagtgat
ctccgagcttcactcgactctctcagacagcaagtggcaatgacacagagcctcagagat
cacctgggagctttaggtcagacatgtcagcgtcacactcgactactggacatccatgtg
gagcagctgcagtgtaacgagcaacgttttcgccaacttgagtccacgtcatatgatgga
aaactcatctggaagattctggactaccagcgtagaaaagacgctggtgcaccgctcacc
tcaccgcctttctacaccggccgcagtggctacaagctgagtgcccgtgcgtacccggat
ggggacggaagcgcccgaggcacacacctttctctctacatcatggtgatgagaggtgac
ttcgactcactgctgccgtggccatttcgccagagcgtcacactcaccgtgctagaccag
agtggctcacgcaaccacgtcagctgcagcttcacccctgacaccagcaaagagagcttc
cgcagacccacagctgacagcaacgccgcgttagggttctctcgcttcatctctcacact
gacctggaaggtccccgaaacgccatcttcatacgagatgacactctgtttgtcaaggtt
aaggttgacacaacagggttggaggatttgtag
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integrated database retrieval system