KEGG   Tachysurus fulvidraco (yellow catfish): 113657684
Entry
113657684         CDS       T08119                                 
Symbol
traf5
Name
(RefSeq) TNF receptor-associated factor 5
  KO
K09849  TNF receptor-associated factor 5
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04217  Necroptosis
tfd04621  NOD-like receptor signaling pathway
tfd05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    113657684 (traf5)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    113657684 (traf5)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    113657684 (traf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tfd04121]
    113657684 (traf5)
Ubiquitin system [BR:tfd04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    113657684 (traf5)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-C3HC4_4 zf-RING_UBOX zf-RING_2 zf-TRAF_2 zf-RING_5 zf-rbx1 zf-RING_6 DUF1664 TRAF3_RING EzrA RING_XB3-XBAT31 HJURP_mid CCDC93_CC Occludin_ELL CorA DUF5054 DUF5955 MT
Other DBs
NCBI-GeneID: 113657684
NCBI-ProteinID: XP_027025409
LinkDB
Position
2:complement(28270694..28281226)
AA seq 550 aa
MAAEENECLSLQLSKQSSDPVRSWELESVLANRTLSFVSRLEERYMCPACGDAILNPHQT
GCGHIFCAKCIRTFIESRDTSKCPLDGILIKSEEVFQDNCCKRELLNLEVYCSNTPDCTQ
KVPLCNLQKHLTLCQYETLQCSNPGCTDILLRKNVPDHQRNLCQFRTEFCHYCTKPYPIT
QLQDHEQMSCPEADVQCPNNCSQMVKRHKLKGHIDECPEVETDCIYKQYGCTVRDKRSKV
KVHEYTEFSHHVLLVLESNSKLAKQVDQLQQDLALQERELKERNLLVANLNREMTKCDSA
FSAIQRSVVEQRESVSSVKQELQELRNVLDAELAKEELSDLRASLDSLRQQVAMTQSLRD
HLGALGQTCQRHTRLLDIHVEQLQCNEQRFRQLESTSYDGKLIWKILDYQRRKDAGAPLT
SPPFYTGRSGYKLSARAYPDGDGSARGTHLSLYIMVMRGDFDSLLPWPFRQSVTLTVLDQ
SGSRNHVSCSFTPDTSKESFRRPTADSNAALGFSRFISHTDLEGPRNAIFIRDDTLFVKV
KVDTTGLEDL
NT seq 1653 nt   +upstreamnt  +downstreamnt
atggcagctgaggagaatgaatgcttgagcctccagctctcaaaacagagctctgatcct
gtgaggtcgtgggagttggagtctgtcctggccaatcgcacactcagttttgtgtcccgg
cttgaggagcgctacatgtgcccggcctgtggtgacgccattcttaacccccaccagacg
ggctgtggccacatcttctgtgccaagtgcattagaacgtttattgagagccgcgacaca
tccaaatgtcccttagatggcattttgatcaagtctgaggaggtttttcaagacaactgc
tgtaaaagagaactactaaatcttgaagtttactgtagcaacactccagattgcacacaa
aaagtgcctctgtgtaatttgcagaaacacctaactctttgtcagtatgagaccctgcaa
tgctccaaccccggctgcactgacatcctgttacgcaagaatgtaccagaccaccagcga
aacctgtgtcagtttcgcacagagttctgtcactattgcacaaagccataccctattacc
cagctccaggaccatgaacagatgtcatgccctgaagcagacgttcagtgtcccaataac
tgctctcagatggttaagaggcataagctcaaaggacatatagatgagtgtccagaagtg
gagacagactgtatttataagcaatatggctgcacagtccgagataaacgaagcaaagtg
aaagtccatgaatacactgaatttagccatcatgtgctacttgtactggagagcaacagc
aagcttgctaaacaggtagaccagctgcagcaggacttggccctccaggagagggagctg
aaagagagaaacttgcttgttgctaaccttaacagggagatgaccaagtgtgacagcgca
ttttctgcaattcagaggtcagtggtggagcagagggagagcgtctcaagcgttaaacag
gagctgcaggagttgcgtaatgttctggatgctgagctggctaaagaggagctgagtgat
ctccgagcttcactcgactctctcagacagcaagtggcaatgacacagagcctcagagat
cacctgggagctttaggtcagacatgtcagcgtcacactcgactactggacatccatgtg
gagcagctgcagtgtaacgagcaacgttttcgccaacttgagtccacgtcatatgatgga
aaactcatctggaagattctggactaccagcgtagaaaagacgctggtgcaccgctcacc
tcaccgcctttctacaccggccgcagtggctacaagctgagtgcccgtgcgtacccggat
ggggacggaagcgcccgaggcacacacctttctctctacatcatggtgatgagaggtgac
ttcgactcactgctgccgtggccatttcgccagagcgtcacactcaccgtgctagaccag
agtggctcacgcaaccacgtcagctgcagcttcacccctgacaccagcaaagagagcttc
cgcagacccacagctgacagcaacgccgcgttagggttctctcgcttcatctctcacact
gacctggaaggtccccgaaacgccatcttcatacgagatgacactctgtttgtcaaggtt
aaggttgacacaacagggttggaggatttgtag

DBGET integrated database retrieval system