Tachysurus fulvidraco (yellow catfish): 113659321
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Entry
113659321 CDS
T08119
Name
(RefSeq) otoferlin
KO
K19949
otoferlin
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113659321
Membrane trafficking [BR:
tfd04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113659321
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
113659321
NCBI-ProteinID:
XP_027027827
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All DBs
Position
12:complement(15436931..15451656)
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AA seq
1789 aa
AA seq
DB search
MKRGKSRGSKDDGKDEPAILETEDLDRRFGKGPDPDTISLASVTAVTTNVSNKRSKPDIK
IEPSCGRLMDFQVSITVIEARQLVGLNMDPVVCVEIGDEKKYTSMKESTNCPYYNEYFVF
EFHVPPDVMFDKILRVSVIHSKNLLRSGTVVGAFKMDVGTVYSQPDHQFYHKWAILCDPD
DITAGCKGYVKCDIAVVTKGDNIKTPHKANETDEDDIEGNLLLPEGVPADRQWARFYIKI
YRAEGLPKMNTSIMANVKKAFIGENKDLVDPYVQVLFAGQKGKTSIQKSCYEPIWNEQVI
FTEQFPPLCKRMKVQIRDADKVNDVAIGTHFIDLRKISNDGDKGFLPTLGPAWVNMYGSL
RSYTIMDEYQDLNEGLGEGVSFRARLLISLAVEILDTSSPEIMCSPEVQVEGVPNISENA
TGKIDEFFLFGAFLEATMIDRKIGDKPINFEVTIGNYGSDVDMPAKPRSKRSKKGEGDEA
SELIQASSDEEVDDDGELASVSTTPPMKPVITDRNYFHLPYFERKPCIYIKSWWQDQRRR
LYNANIIDHIADKLEEGLNDVHEIIKTEKAFPERRLRGVLEELSNGCSKFLTLANKDQNP
TGITKLDREKLKLCMWELEMMAQQAKTMRSQVKRKTVKDKVKLAQNFLQKLRFLSDEPQH
SVPDVYIWMVSNGKRIAYARVPSKDLLFSNVEEEIGKDCAKVKTIFLKLPGKKGFGSAGW
TVQAKTEIYLWLGLNKHRKDFLNGLPNGFEENKAVKGPGMHSTPPISLIYTMKQIFQLRV
HMYQARSLFAADSTGLSDPFARVFFSTHSQVTEIVNETLCPTWDQLLVFDNVELYGEASE
LRDDPPIIVIEIYDQDSMGKADFMGRIFAKPITKMSDEHYGPPRFPPQLEYYQVYRGNCT
AGELLAAFELLQIGPGGKADLPPIDGPTDMDRGPILPVPIGIRPVLSKYRIEILFWGLRD
LKRVNLAQVDRPRVDIECAGKGIQSALIPNYNKNPNFSTLVKWFEVDLPENELLHPPLNI
RVVDCRAFGRYTLVGTHAVTTLRKFIYRPPDKSVNNWSAMEEIVIHTEPEPAVKKMETMV
KLDSASDAVVKVDMPDDDKEGKGKKKRKKGEEAEEEQLDESMLDWWSKYFASIETLMEIL
KAQEAEKAEAEDREDMDADGADIKPESNVKGNKKKKGKAKDKNKSAPGEGSPEKKKPKIE
ELKVFNRELESEFDSFEDWLHTFNLYRGKSGDDDDTVMDEDRLVGKFKGSLCMYKVSDEL
YREMGTDSNISTFQNIPHNDPVNVLVRVYVLRATDLHPADINGKADPYIAIKLGKSEVKD
KENYISKQLNPVFGKSFDIEATFPMDSTLTVSVYDWDLVGTDDLIGETKIDLENRYYSKH
RATCGISSSYAIYGYNVWRDPMKPTHILAKLCKDGKLDPPQYGPGGRVKVANRVYTGPTE
IEDENGLKKQTDDHLALAVLNHWEDIPRVGCKLVPEHVETRPLLNPDKPGIEQGRIEMWV
DLFPKDMAAPGPAVDISPRKPKKFELRVIIWNTDEVVLEDDDIFTGEKSSDIFVRGWLKG
QQEDKQDTDVHYHSLTGEGNFNWRFIYPFDYLMAEEKIVISKKESMFSWDETEYKIPARL
NLQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCTLDMVLNEQDMPMVNIFKQKRIKG
WWPFIARDENDEMEITGKVEAELHLMTGEEAEKSPVGEGRNEPEPLEKPNRPDTTFLWFI
SPLKAIRYLVCNNYKWLIIKIVVALLLLAMLGLFLYSMPGYMVKKLLGA
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtggaaagtcccgaggctctaaggatgatgggaaagatgagccagccatcttg
gagacagaggacttggacagaaggtttggcaaaggaccagaccctgacactatttcactg
gcctctgttactgctgtaacaactaatgtatctaacaaaagatcaaaacctgacatcaaa
attgaaccaagctgtggaagactgatggatttccaagtgagcattacagttattgaggcc
cgacagcttgtgggattgaacatggatccagtggtttgtgttgaaattggtgatgagaaa
aagtacacttcaatgaaggagtcaaccaactgcccttactacaatgagtactttgtcttc
gagttccatgttcctcctgatgtcatgtttgacaagattctgagggtgtcagttatccat
tctaaaaatcttctgcgaagtggaacagtggttggtgccttcaagatggatgtgggaact
gtttattcacagcctgaccaccagttctaccacaaatgggccattttatgcgatccggat
gacatcactgcagggtgcaaaggctatgtaaaatgtgacattgctgtggttacaaaaggt
gacaacatcaaaactccacacaaggccaatgaaactgacgaagatgacatcgagggaaat
cttctgttgccagaaggtgttccagctgaccgtcaatgggctcgattctatataaaaatc
tacagagctgaaggcttacctaagatgaacaccagcattatggccaatgtgaaaaaggca
tttattggtgagaataaagacctggtggacccatatgttcaggtgctatttgctggtcaa
aagggaaaaacctctatccagaaaagctgctatgaaccaatctggaatgagcaggtcatt
ttcactgaacaatttccaccactgtgtaaacgcatgaaggttcaaatccgggatgcagac
aaagtgaatgatgtggctattggaacacatttcattgacctacgaaaaatctcaaacgat
ggagataaaggctttctcccaaccctggggcctgcctgggtgaacatgtatggttcactt
agaagctacaccattatggatgagtatcaggatctgaatgagggactgggagagggagtt
tcatttcgggcccgtctgctgatcagcttggctgtggagattctggacacatcctctcca
gagataatgtgctctcctgaagtccaagtggaaggagtacccaacatttcagagaatgcc
actggaaaaattgatgaatttttcttgtttggagcatttctagaagcaacaatgattgac
agaaagattggtgacaagcccattaactttgaagttacaataggaaattatggcagtgat
gttgatatgcctgccaaaccaagatcaaagaggtcgaagaaaggagaaggtgatgaagcg
tccgaactcatccaagcctccagtgatgaagaggtggatgatgatggagaactggcatca
gtgtccaccactccaccaatgaaaccagtcatcactgataggaactactttcaccttcca
tattttgagagaaagccctgtatttatattaagagctggtggcaagaccagaggagaagg
ctatacaatgccaacataatagaccacattgcagataagttggaagaaggattgaatgat
gttcatgagattattaaaacggagaaggcttttcctgagcgaaggctcagaggagttcta
gaagaactgagtaatggctgcagcaaatttctaacactggcaaacaaggaccaaaacccg
acagggatcacaaagttggatagagaaaagctgaaattatgcatgtgggagctggaaatg
atggcacaacaagcaaagacgatgcgatctcaagtgaaaagaaaaactgtaaaggataaa
gtcaaattggcacaaaactttcttcagaaactgagattcttgtctgatgagcctcaacac
agtgttccagatgtttacatatggatggtcagcaatggaaaacgcattgcatatgctaga
gtgccctccaaagacctccttttctctaatgtagaggaggagattgggaaagactgtgca
aaagtcaagaccatttttttaaagctcccaggtaaaaaaggctttggatcagcaggctgg
actgtccaagcaaagactgaaatttacctctggctgggtttaaacaagcaccgcaaagac
ttcctgaatggattaccaaatggatttgaggaaaacaaggctgtcaaaggcccaggaatg
cattcaacaccaccaatcagcttgatctacaccatgaagcaaattttccagctgagagta
cacatgtaccaagcaaggagcctgtttgctgcagatagcacaggtctttcagaccccttt
gccagagtctttttttcaactcacagccaggtcacagagatagtgaatgagaccctttgc
cccacatgggatcaacttcttgtatttgacaatgttgaattatatggtgaggctagtgag
ctgagggatgaccctccaattattgtcatcgagatatatgaccaagacagtatgggtaaa
gctgatttcatggggaggatatttgcaaagccaataactaagatgtcagatgagcattac
gggccaccacgattccctcctcagctagagtattaccaggtgtaccgtggaaactgcact
gctggagaactgcttgcagcttttgaactactgcagattggaccaggtggaaaggctgat
ctcccccccatagacggacccacagatatggatcgtggtccgattctgcccgtccccatt
ggcattagaccagtcctgagcaaatatcgtattgagattttattctggggtctgagggac
ctgaagagagtaaaccttgcccaagttgacagaccacgggtagacatagaatgtgctgga
aaggggatacagtcagctctcattcctaattacaacaaaaatcccaattttagcacgctg
gtcaaatggtttgaagtggacctgccagagaatgagcttcttcatcctcctctgaatatt
cgagttgtggactgcagagcttttggccgttatacactggttggcacccacgcagtcacc
acattgcgcaaattcatctacaggccgccagacaagagtgtcaacaattggtcagctatg
gaggaaattgtgattcacactgaacccgaacctgctgtgaagaagatggaaacaatggtc
aaacttgactcagcatccgatgcagtcgttaaggttgatatgcctgatgatgacaaggaa
ggcaagggaaaaaagaagaggaagaaaggggaagaggctgaagaagaacaactagatgag
agtatgctggattggtggtccaaatactttgcatcaattgaaaccctcatggaaatccta
aaagcacaagaagctgaaaaggcagaggcagaggacagagaggacatggatgcagatggg
gcagatatcaaacctgaatctaatgttaaaggaaacaagaagaaaaaaggaaaagccaag
gataagaacaaatccgccccaggggagggctcacctgaaaagaaaaagcctaaaattgag
gaactaaaggtgttcaacagagagttagagagtgaatttgatagctttgaagactggctg
cacacttttaatctttacagaggaaagagtggtgatgatgatgatactgtaatggatgag
gacagacttgttggcaaattcaagggctccttgtgtatgtacaaagtgtcagatgagctg
tatagagaaatgggaactgattccaacattagcacttttcagaacattccacacaatgac
ccagtcaatgttttagttcgtgtctatgtcttaagggctactgatctacaccctgcagat
ataaatggtaaagcagatccatacattgcaattaaactgggaaagtcagaggttaaagac
aaagaaaactacatctctaaacaacttaatcctgtcttcggaaaatcatttgacattgag
gcgacattccctatggactctactcttaccgtgtctgtctatgactgggatttggttggc
actgatgacttgattggagagacaaaaattgatttggagaaccgttattacagcaagcac
agggctacatgtggaatctcttcgagctatgcaatttatggttacaatgtttggagagac
ccaatgaagccaacacacatcctagcaaaactgtgcaaggatggcaaattagatccaccc
cagtatggccctggaggaagagtgaaagtggcaaacagagtttatacaggcccaactgaa
attgaggatgaaaacgggctcaagaagcagacagatgatcaccttgctttagcggttctt
aatcactgggaggacattccacgagtgggctgcaaacttgtccctgagcatgtagaaaca
agacctcttctgaaccctgataaacctgggattgagcaggggagaatcgaaatgtgggtg
gacttgttcccaaaagacatggctgcacctggacctgctgttgatatctcaccacgcaaa
ccaaagaagtttgaacttagggtaatcatttggaatacagatgaggttgtcctggaagat
gatgatatattcacaggagaaaagtccagtgatatttttgtgagaggatggcttaaaggt
caacaagaagacaagcaagacacagatgtccattaccactctctaacaggggaaggaaac
ttcaactggcgcttcatttacccctttgactatttaatggctgaggagaaaattgtcatc
tcaaagaaggaatccatgttttcctgggacgagactgagtacaagatccctgcccgtctg
aatctgcaagtctgggatgcagatcatttttctgcagatgatttcctgggtgcaattgaa
ctagatttgaacagatttcctcgtggtgcaaaaactgcaaaacagtgtacccttgacatg
gtacttaacgaacaagatatgccaatggtcaacatcttcaagcagaaaagaatcaagggc
tggtggccatttatagccagggatgaaaatgatgaaatggaaatcacgggcaaagtagag
gcagagctccatcttatgacaggtgaagaagctgaaaaaagtcctgttggtgaaggacgc
aatgagccagagcctctagagaaacccaatcgacctgacacaacattcctgtggttcatc
agtccgctcaaagcaatccgatatctcgtctgcaacaactacaaatggctgatcatcaaa
atagtggtggctttgctgttgttagcaatgctgggcttattcctttacagtatgcctggg
tatatggtgaaaaagctccttggtgcctaa
DBGET
integrated database retrieval system
