Tachysurus fulvidraco (yellow catfish): 113659586
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Entry
113659586 CDS
T08119
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04620
Toll-like receptor signaling pathway
tfd04621
NOD-like receptor signaling pathway
tfd04622
RIG-I-like receptor signaling pathway
tfd05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
113659586 (traf3)
04621 NOD-like receptor signaling pathway
113659586 (traf3)
04622 RIG-I-like receptor signaling pathway
113659586 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113659586 (traf3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
Crescentin
zf-C3HC4_2
zf-C3HC4_4
Sina_ZnF
AAA_13
DUF1664
Laminin_II
zf-RING_UBOX
IFT57
TMPIT
FapA
Syntaxin-6_N
CCDC144C
BLOC1_2
DUF4363
Exonuc_VII_L
ATG16
Fzo_mitofusin
Motif
Other DBs
NCBI-GeneID:
113659586
NCBI-ProteinID:
XP_027028278
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All DBs
Position
12:6830205..6845989
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AA seq
556 aa
AA seq
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MSLPHRVDGREPQIALQQQQSFLPQRGGFQDHFVMHPEPKYCCEHCHMVLCKPRQTECGH
RFCESCIIQLLSKTNPVCPADMEPLSPEKIFRDVCCHREIMTLKVYCRSAKNGCKEQMSL
QQVTDHLNMCEYFEVPCPLCKEKIMRKDVSEHLSHKCKYRETTCEFCKHKMALTELQKHK
ETVCPAFPVSCPNHCSFPSILRSELSIHQQDCPKAQVTCSFFRFGCNFKGLNQEIREHES
SFASEHLRLMMARSNTLEAKVEDVKSELLERYAVLPGLSSRLTEVEEQYKEMREKYRQVE
QKLSSMQKLMSAHSEKLLEVEMELRDLRSLRSMREEVEALRGAVESMRSVVASLDTVRSS
PGSHTLTSLETELSRHDELLSVHDIRLADMDLKLQVLETASFNGTLIWKIRDYKRRKQEA
VASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFRQ
KVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTGEMNIASGCPLFVAQTVLENGTYIKDD
TIFIKVTVDTSDLPDP
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgccgcaccgtgtggacgggcgggagccgcagattgctctgcagcagcagcag
tccttcctcccgcagcgtggtggttttcaggaccactttgtcatgcatcctgagcccaag
tactgctgcgagcactgtcacatggtgctgtgtaaacctcggcagaccgagtgcggacac
cgcttctgcgaaagctgcattatccagctgcttagtaaaacgaatccggtgtgcccagct
gatatggagccattgtctccagaaaaaatatttcgtgatgtttgctgccatagagagatc
atgacactgaaagtctactgccgcagcgcgaaaaacggatgtaaagaacaaatgagttta
cagcaggttacggaccatctgaacatgtgtgagtactttgaggtgccgtgtccgttgtgt
aaagagaagattatgaggaaggacgtgtctgaacacttgagccacaaatgcaaataccgt
gagaccacctgtgaattctgcaaacacaaaatggccttaacggaactacagaaacacaaa
gaaactgtctgtcctgcatttccagtatcatgccccaatcattgttcgtttccatccatt
ttaagaagcgagctgtccattcaccagcaagattgtccaaaggctcaagtcacatgctcc
ttctttcgttttggctgcaacttcaagggtttgaaccaggaaattagggagcacgagtca
agctttgcctcagaacacttgcgactgatgatggccagaagcaatactctagaggccaag
gtggaggacgtcaagagcgagctgctggagcgctacgcggttctcccgggtctgagcagt
cgtctaacagaagtggaggaacagtacaaggagatgagagagaaatatcgacaagtggag
cagaaactctccagcatgcagaagctaatgagcgcacactctgagaaactgctggaggtg
gagatggagctgagggatctgcggtcattaaggtccatgcgggaggaagtggaagctctg
aggggtgccgtggagagcatgcgctctgtcgtagcgtcgctcgacactgtccgaagcagt
ccaggttcccacacgctaacctcattagagacagagctgtcacggcatgatgagctgctc
agtgtgcatgacattcgtttggctgacatggacctgaagctgcaggtgctggagacagcc
agcttcaatggaactcttatttggaagattcgtgactacaaacggcgcaagcaagaagcg
gtggcttctaaaacgttgtcgctttacagccagcccttctatactggctattttggctac
aagatgtgtgcacgtgtttatctgaacggtgacggcatggggaagggcacccacctgtcg
ctgttctttgtggtgatgcgtggtgagtatgatgcgctgctgccatggccttttcgccaa
aaagtgacactcatgctaatggaccagggtcctgcacgcaagcacttgggcgatgccttc
aagcctgacccaaacagcagcagcttccggcggccaacaggggagatgaacattgcatcg
ggctgtccgctctttgtcgcccagaccgttctggagaacggcacctacatcaaagatgac
accatcttcatcaaggtcacagtggacacttcagacctgcctgacccatga
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integrated database retrieval system