KEGG   Tachysurus fulvidraco (yellow catfish): 113659586
Entry
113659586         CDS       T08119                                 
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
  KO
K03174  TNF receptor-associated factor 3
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04620  Toll-like receptor signaling pathway
tfd04621  NOD-like receptor signaling pathway
tfd04622  RIG-I-like receptor signaling pathway
tfd05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    113659586 (traf3)
   04621 NOD-like receptor signaling pathway
    113659586 (traf3)
   04622 RIG-I-like receptor signaling pathway
    113659586 (traf3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    113659586 (traf3)
SSDB
Motif
Pfam: TRAF-mep_MATH zf-TRAF TRAF3_RING zf-C3HC4 Crescentin zf-C3HC4_2 zf-C3HC4_4 Sina_ZnF AAA_13 DUF1664 Laminin_II zf-RING_UBOX IFT57 TMPIT FapA Syntaxin-6_N CCDC144C BLOC1_2 DUF4363 Exonuc_VII_L ATG16 Fzo_mitofusin
Other DBs
NCBI-GeneID: 113659586
NCBI-ProteinID: XP_027028278
LinkDB
Position
12:6830205..6845989
AA seq 556 aa
MSLPHRVDGREPQIALQQQQSFLPQRGGFQDHFVMHPEPKYCCEHCHMVLCKPRQTECGH
RFCESCIIQLLSKTNPVCPADMEPLSPEKIFRDVCCHREIMTLKVYCRSAKNGCKEQMSL
QQVTDHLNMCEYFEVPCPLCKEKIMRKDVSEHLSHKCKYRETTCEFCKHKMALTELQKHK
ETVCPAFPVSCPNHCSFPSILRSELSIHQQDCPKAQVTCSFFRFGCNFKGLNQEIREHES
SFASEHLRLMMARSNTLEAKVEDVKSELLERYAVLPGLSSRLTEVEEQYKEMREKYRQVE
QKLSSMQKLMSAHSEKLLEVEMELRDLRSLRSMREEVEALRGAVESMRSVVASLDTVRSS
PGSHTLTSLETELSRHDELLSVHDIRLADMDLKLQVLETASFNGTLIWKIRDYKRRKQEA
VASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFRQ
KVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTGEMNIASGCPLFVAQTVLENGTYIKDD
TIFIKVTVDTSDLPDP
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgtccttgccgcaccgtgtggacgggcgggagccgcagattgctctgcagcagcagcag
tccttcctcccgcagcgtggtggttttcaggaccactttgtcatgcatcctgagcccaag
tactgctgcgagcactgtcacatggtgctgtgtaaacctcggcagaccgagtgcggacac
cgcttctgcgaaagctgcattatccagctgcttagtaaaacgaatccggtgtgcccagct
gatatggagccattgtctccagaaaaaatatttcgtgatgtttgctgccatagagagatc
atgacactgaaagtctactgccgcagcgcgaaaaacggatgtaaagaacaaatgagttta
cagcaggttacggaccatctgaacatgtgtgagtactttgaggtgccgtgtccgttgtgt
aaagagaagattatgaggaaggacgtgtctgaacacttgagccacaaatgcaaataccgt
gagaccacctgtgaattctgcaaacacaaaatggccttaacggaactacagaaacacaaa
gaaactgtctgtcctgcatttccagtatcatgccccaatcattgttcgtttccatccatt
ttaagaagcgagctgtccattcaccagcaagattgtccaaaggctcaagtcacatgctcc
ttctttcgttttggctgcaacttcaagggtttgaaccaggaaattagggagcacgagtca
agctttgcctcagaacacttgcgactgatgatggccagaagcaatactctagaggccaag
gtggaggacgtcaagagcgagctgctggagcgctacgcggttctcccgggtctgagcagt
cgtctaacagaagtggaggaacagtacaaggagatgagagagaaatatcgacaagtggag
cagaaactctccagcatgcagaagctaatgagcgcacactctgagaaactgctggaggtg
gagatggagctgagggatctgcggtcattaaggtccatgcgggaggaagtggaagctctg
aggggtgccgtggagagcatgcgctctgtcgtagcgtcgctcgacactgtccgaagcagt
ccaggttcccacacgctaacctcattagagacagagctgtcacggcatgatgagctgctc
agtgtgcatgacattcgtttggctgacatggacctgaagctgcaggtgctggagacagcc
agcttcaatggaactcttatttggaagattcgtgactacaaacggcgcaagcaagaagcg
gtggcttctaaaacgttgtcgctttacagccagcccttctatactggctattttggctac
aagatgtgtgcacgtgtttatctgaacggtgacggcatggggaagggcacccacctgtcg
ctgttctttgtggtgatgcgtggtgagtatgatgcgctgctgccatggccttttcgccaa
aaagtgacactcatgctaatggaccagggtcctgcacgcaagcacttgggcgatgccttc
aagcctgacccaaacagcagcagcttccggcggccaacaggggagatgaacattgcatcg
ggctgtccgctctttgtcgcccagaccgttctggagaacggcacctacatcaaagatgac
accatcttcatcaaggtcacagtggacacttcagacctgcctgacccatga

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