Tachysurus fulvidraco (yellow catfish): 113660142
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Entry
113660142 CDS
T08119
Name
(RefSeq) protocadherin gamma-C5-like isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfd04515
]
113660142
Cell adhesion molecules [BR:
tfd04515
]
Cadherins
Protocadherins
113660142
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
PepSY
RET_CLD1
TMEM154
Motif
Other DBs
NCBI-GeneID:
113660142
NCBI-ProteinID:
XP_047676049
LinkDB
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Position
10:complement(14595903..14675902)
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AA seq
967 aa
AA seq
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MMERRKRSRCSEWPALWLALSSLSCLSCATAELRYSVAEEQQPGSLVGNIAKDLGLTVQK
ISERKMRLISDANAQYFEINSVSGALVINETIDRERLCELSLTCSLPLKIVLNDPLEIKR
VVVDIVDVNDNSPQFPARNSSLEVSEAAAPGTRFRLESARDPDMGANSLRTYRLEPNDFF
TLNVEMKSDGSKVPELVLEKALDREVRAAFRLLLTAVDGGQPERSGTTLLLITVLDVNDN
APVFDEPVKRVSLLENSPSGTIVAKFNATDADSGTNGDISYLFSKYNSERVLEVFSVDVK
TGELKVIGDVDYEQTSVYDITVQARDGGTPAIEGSCHIKVEILDVNDNTPEVTLTSLTSP
ISEDAPAGTVIALISARDLDSGKNGQVTLKVSQGLPFKLKSAFGEHYTLVTDGPLDRESV
PEYTVVVTVTDAGSPPLSSKKTFVVSLSDVNDNAPVFSQPYYSIDIMENNSPSTSLVTVS
ASDPDLGDNGRLTYSILASTVHGSPVSSYVYINPENGNIFTMRSLDYEQMNAFKIEVQVQ
DSGVPPRSSNITVHVFVIDQNDNPPVILYPTNSGDTGLQLTMPRSAPVGHLVNKIVGYDP
DSGHNAWLFYSIAPGEDAEFFRIGEHTGELRTARKLYETESESQVRSSYSFVVVVQDNGQ
PNQSTSASVTINVEEKSADKDTDLHKTSSHKTGGIPDISLYLIISLGCVTLVFLLTIVVL
LVRCLRHKDDLTCCYSRKGFRSRPSYQHRSHKDLHLQMNTDGPIRYMEVVGGPQEPHTRT
YRPCYSTISSRSDFVFVKTPLLSHNNTLNMTLTRKHLLNSANEQKPPNADWRFNQNQRPG
PSGAAATPEVAMGTGPWPNPPTEAEQLQALMAAANEVSEATNTLGPGTMGLSTRYSPQFT
LQHVPDYRQNVYIPGSTATLSANPQQPQQPQQPPQALPAPQITSAQVEPPNAQTPASKKK
ITKKEKK
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcggagaaagaggagccgctgctcggaatggcccgcgctctggctcgccctc
tcctccctgtcctgcctctcatgcgcgacagcagagctccgctattccgtggccgaagag
caacaaccaggctctcttgtcgggaacatagcgaaagacttgggcctcacagttcagaag
attagcgaaaggaagatgcgccttatttctgacgccaacgctcagtatttcgagataaac
tcagttagcggtgccttagtaattaacgagaccatcgacagggagcgcctgtgtgagtta
agtttaacatgttctttgccccttaaaatagttctcaacgatccattggagataaagcgt
gtcgttgtagacattgttgatgtgaacgacaactcgccgcagttcccggctcgtaactca
tccctggaggtctcggaagcggccgcgccgggaacgcgcttccgtctagagagcgcgcgc
gacccagacatgggcgccaactcgttgcggacgtaccgtctcgagcctaacgacttcttc
acgctaaacgtcgagatgaaaagtgacggcagcaaagttcccgagctcgtgctggagaag
gcccttgatcgtgaggtgcgcgccgcatttcgcctcttgctcacggcggtggacggcgga
cagccagagagatccggcaccacactcttgttgatcacagttttggatgtgaacgataac
gcgcccgtttttgatgagccagtaaaacgggtgagccttttagagaactctccttctggc
actattgtggccaaatttaatgccacagatgcagactctggaacaaacggagatatatct
tacttattcagcaaatacaactcagagagagttcttgaggttttcagtgtggatgtgaaa
actggagaactcaaggttattggtgatgtggattatgaacagacgagtgtatatgacatc
actgttcaggccagggacggtggaactcccgccattgagggttcatgtcacattaaagtg
gaaattttggatgtgaacgataacacgccggaagtgacgttaacatccctcaccagtccc
atcagtgaagatgcaccagcaggcactgtcattgcactgatcagcgcaagggacttagat
tcagggaaaaatggacaggtgacattaaaagtgtctcaagggctgccatttaaactgaaa
tctgcttttggggagcattacaccctagttacagatggccctttggacagggaaagtgtc
cctgagtacactgttgttgtgactgtaacagatgcaggttctcctccattgtcctctaaa
aaaacttttgttgttagtctctctgatgtaaatgataatgctccagtattctcacagcca
tattactctattgacatcatggagaataactcccccagtacctcgctcgtgacagtgtca
gcctctgacccagacttgggggacaatggccgtctcacctactccattttggcctctact
gtccatggaagccctgtgtcctcttacgtctatattaacccagagaatggcaatatcttt
accatgcgttcattggactatgagcaaatgaatgcgtttaagattgaagtacaggtgcag
gacagtggggtcccaccacgcagctccaatataacagtccatgtttttgtcattgaccag
aatgacaatccacctgtcatcctttaccccactaactctggtgacactggccttcagctg
actatgccccgctctgcccctgtcggccatcttgtgaataagatagttggttatgaccca
gacagcgggcataacgcatggctgttctacagcatcgcacctggtgaggatgcagaattt
ttccgtattggagagcacacaggggagcttcgtactgcaaggaaactatatgagactgag
tcagagagccaggtgcgctcatcatacagctttgtagtggttgtgcaggacaatggacag
cctaaccagtccaccagtgccagtgtcaccattaatgtagaagagaagagtgcagacaaa
gacacagaccttcataaaacatcttctcataaaacaggcggaattccagacataagcctg
tacctcataatatcactgggctgtgtgactctggtctttcttttgaccattgtggtgctg
ctggtgcggtgcctcagacacaaagatgacctaacatgctgctactccaggaagggcttc
cgttctcgcccttcttaccagcatcgttcccataaggaccttcacctacagatgaacacg
gatgggcctatccggtacatggaagttgtggggggccctcaggaaccccacacacgcaca
tacaggccctgctactctacaatctccagcaggagtgactttgtgtttgttaagactcct
ctactgagccataacaacacattaaacatgaccctaacccggaagcacttattaaactca
gccaatgagcaaaaaccccccaacgctgactggcgtttcaaccagaaccagagacctgga
cccagtggagctgctgccactccagaggtcgccatgggaaccggaccctggccaaacccc
ccaaccgaggcagagcagctccaggcactaatggctgctgcaaatgaagtgagtgaggcc
acaaacacactgggtcctggcaccatgggcctgagcacacgctacagtccccagttcacc
ctgcagcatgttcctgactaccggcagaacgtctacatcccgggcagcactgccactctc
agtgccaacccccagcaaccccagcagccccagcaacctcctcaggcacttcctgctcca
cagatcaccagcgcccaggtcgagcctcccaacgcccagacacctgctagcaagaagaag
atcaccaagaaggagaagaaataa
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