Tachysurus fulvidraco (yellow catfish): 113660295 Help Entry 113660295         CDS       T08119                                  Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism tfd  Tachysurus fulvidraco (yellow catfish) Pathway tfd04115   p53 signaling pathway tfd04145   Phagosome tfd04148   Efferocytosis tfd04350   TGF-beta signaling pathway tfd04510   Focal adhesion tfd04512   ECM-receptor interaction tfd04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:tfd00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     113660295   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     113660295  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     113660295    04148 Efferocytosis     113660295   09143 Cell growth and death    04115 p53 signaling pathway     113660295   09144 Cellular community - eukaryotes    04510 Focal adhesion     113660295   09142 Cell motility    04820 Cytoskeleton in muscle cells     113660295  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tfd04131]     113660295   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:tfd00536]     113660295 Membrane trafficking [BR:tfd04131]  Endocytosis   Phagocytosis    Opsonins     113660295 Glycosaminoglycan binding proteins [BR:tfd00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    113660295 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C TSP1_ADAMTS EGF_3 cEGF Laminin_G_3 EGF TSP1_CCN Motif Other DBs NCBI-GeneID:  113660295 NCBI-ProteinID:  XP_027029466 LinkDB All DBs Position 12:complement(6064296..6073404) Genome browser AA seq 1180 aa AA seqDB search MMLSALCLLLMLWSARGSGIAESREDNSVYDLFELAKVSKKHNGVSLVKGPDPYSPAYKI LNPNLIPAIPERSFRDLIYSIQEERGFLFVANLKQAKKTRGSLFSVERIDGSGSIFELVS NGNGNTLDLIYATESGHHEISIDDARLASGSWENITLFVEEDRAQLYIGCEQINTSELDV PIHQILTQDVADVSVLRIGKGAVKSRFLGVLQNARFVFRTTLETILRNMGCESSHFIIDV VTLDNPVNGSSPAIRTDYTGHKTKDLQDICGFSCDDLASMFKELKGLGVVVKQLSNQLHQ VTSENALIKTQIKKFSGVCLHNGIIYKDKDEWTVDSCTHCTCQNSATICREISCPLMPCA NATVPDGECCPRCGTLNDDADDGWSPWSEWTYCSVTCGRGIQQRGRSCDRINSNCEGTSV QTRDCYLQECDKRFKQDGGWSHWSPWSSCSVTCGIGVITRIRLCNSPTPQMGGEDCQGEG RQTEPCKMSPCPINGGWGPWSLWDSCSVTCGGGLQSRHRLCNNPVPKYGGKECIGDPKGT RICSSQDCPIDGCLSNPCFAGSKCTSFPDGSWKCGECPVGYTGDGIHCQDIDECKMVPDA CFTLNGVHRCENTNPGYNCLQCPPRYSGNQPFGRGSEQAMANKQVCTPRNPCEDGSHNCN KRANCIYLGVFSDIMFRCECKPGYAGNGYICGEDPDLDGWPNTDLHCVENATYHCKKDNC PDLPNSGQEDYDKDGMGDACDYDDDNDGIPDDRDNCPFVFNPRQADQDQDEVGDRCDNCP YNSNPDQIDTDKNGEGDACAIDIDGDGILNENDNCPYVYNVDQRDTDHDGVGDHCDNCPL QHNPDQIDSDSDNVGDKCDSNQDIDDDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGVPDDKDNCRLAPNPDQLDSDGDGRGDVCKDDFDQDNVPDIVDVCPENFAISETDFR RFQMVPLDPTGTSQIDPNWVVRHQGKELLQTVNCDPGIAVGYDEFNAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHSPTKAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGDTTGQVRTLWHDPKKIGWKDFTAYRWQLIHRPTSGLIRVIMYEGKKVMADSGNI YDKTYAGGRLGLFVFSQEMVYFSDLKYECRDDSERNRTNF NT seq 3543 nt NT seq  +upstreamnt  +downstreamnt atgatgttgtccgcgttgtgtttgctgctgatgctgtggagtgcacgaggcagcggaata gcagagagccgagaagacaacagcgtgtatgacttatttgagctcgcaaaagtcagtaaa aaacacaatggagtgagcctagtaaagggacctgacccttacagccctgcttacaaaatc ctcaaccccaacctgatccctgccatccctgagcgctccttcagggatctcatttactcc atccaggaggaaagaggcttcctgttcgtggctaacctcaagcaagccaagaagaccagg ggcagcctgttttctgtagagaggattgatggctctggttccatttttgagcttgtctca aatgggaatggcaatacgttagatctgatttatgccacagaaagcgggcaccatgagatc tcaattgacgacgcacgactggccagcggcagctgggagaacatcaccctgtttgtggaa gaggaccgtgcacagctctatattggttgtgaacagataaacacaagtgaactagatgtg cctattcaccagattctgacacaggatgtcgctgatgtctctgttcttaggattggaaaa ggagcagtgaaaagcagatttctgggtgtgctccagaatgcacgatttgtatttagaacc actttggagacaatcctccgtaacatgggatgtgagagctctcacttcatcatagacgtt gtgaccctcgacaacccagtgaatggctccagtccagcaatacgcacagattacacggga cacaagaccaaagatctccaggacatctgtggcttctcttgtgatgacttggccagcatg tttaaagagctcaagggacttggtgtggttgttaagcaactgtcaaatcagctccaccaa gtgacttcagaaaatgctctgataaagacccaaattaagaaattcagtggagtgtgcctg cataatggcattatctacaaagacaaggatgagtggacggtggacagctgcacccattgc acctgccagaactctgccactatttgccgggaaatctcctgccctcttatgccttgtgcc aatgccactgttcctgacggtgaatgctgcccacgttgtggaaccttgaatgatgatgct gatgatggctggtctccctggtccgagtggacctactgctcagttacctgtggccgtggc atccagcaacgggggcgctcatgtgatcgcatcaacagcaactgtgaaggcacttcagtg cagacaagagactgctacttgcaagaatgtgacaaacgcttcaagcaagatggaggctgg agccactggtctccctggtcatcatgttcagtgacctgtggcattggtgtcattactcgc atccgcctctgtaactcacccacaccacaaatgggaggcgaagactgtcaaggagaaggc aggcagacagaaccatgcaagatgtccccttgtccaatcaatggaggttgggggccatgg tcactatgggattcttgctctgttacttgtggaggtggactgcagagcaggcatcggctc tgcaacaatcctgtgcccaaatatggtggaaaagagtgcattggcgatcccaaaggcacc cgtatatgcagctctcaagactgtcccattgatggctgcctttccaacccttgctttgct ggttctaagtgcaccagctttcctgatggctcctggaagtgtggggagtgtccagttggc tatactggagatggaattcattgtcaagacattgatgagtgcaaaatggttcctgacgct tgcttcacgctcaatggagtccatcgttgtgagaacacaaatccaggctataactgccta caatgtcctcctcgctactctggaaatcagccttttggcagaggcagtgagcaagcaatg gccaataaacaggtctgtacacccaggaacccatgtgaggacggcagccataactgtaac aaaagggccaattgtatttatttgggcgttttctctgacatcatgtttcgctgcgaatgc aagccaggctacgctggtaatggttatatatgtggagaggaccctgacctggatggctgg cccaacactgatctccactgtgttgaaaatgccacctaccactgcaagaaggacaactgc cctgacctacccaactctgggcaagaggactatgacaaagatggaatgggagatgcttgt gattatgatgatgacaatgatgggatccctgatgatagggacaactgcccatttgtcttc aacccaaggcaagctgatcaagaccaagatgaagtcggtgatcgctgtgataactgccca tataacagcaatccagaccagattgacacagacaaaaatggagaaggcgatgcttgtgca attgatattgatggtgatggtattctgaatgaaaacgacaactgcccgtacgtgtacaat gttgaccagagagacactgaccatgatggggttggagaccactgtgacaactgtccattg cagcacaaccctgatcagattgactctgattcagataatgtgggtgacaaatgcgacagc aatcaggacattgatgacgatggtcaccagaataatctagacaactgcccatacatcccc aatgccaaccaggctgatcatgacaaagatggaaagggtgatgcatgcgaccatgatgat gacaatgatggtgtgcctgatgacaaagataactgtagactggcccctaatccagatcag ttagattctgatggtgatggacgtggtgatgtttgcaaggatgactttgaccaagataat gtccctgatattgtggatgtttgtccagagaactttgccatcagtgaaacagatttccgt aggtttcagatggttcctctagaccctacaggaacttcacaaattgatcctaactgggtg gtccgccatcagggtaaagagcttcttcagacagttaattgcgaccctggcattgctgtt ggatatgatgaatttaatgcagtggattttagtggaacattcttcatcaacactgaccga gatgatgattatgctggatttgtgtttggatatcagtccagctctcgcttctatgtagtg atgtggaaacagatcacacagacctactggtctcactcacccacaaaagctcagggctac tctggactgtccatcaaagttgtcaattctaccactggtccaggagaacaccttaggaat gctttgtggcatacgggagacacaaccggacaggtgcgtactttgtggcatgaccctaag aaaattggttggaaagatttcactgcctacagatggcaactgatccatagacccactagt ggacttatcagagtcatcatgtatgaaggcaagaaagtcatggcagattctggaaatata tatgacaagacatatgctggtggaagacttggtctttttgtcttctctcaggagatggtt tacttttcagaccttaaatatgaatgtcgagacgattctgaaaggaacaggacgaatttt taa

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