Tachysurus fulvidraco (yellow catfish): 113660403
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Entry
113660403 CDS
T08119
Symbol
lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd00514
Other types of O-glycan biosynthesis
tfd04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
113660403 (lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113660403 (lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tfd01003
]
113660403 (lfng)
Enzymes [BR:
tfd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
113660403 (lfng)
Glycosyltransferases [BR:
tfd01003
]
Glycan extension
O-Glycan
113660403 (lfng)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
113660403
NCBI-ProteinID:
XP_027029698
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All DBs
Position
24:15044515..15052337
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AA seq
378 aa
AA seq
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MLKSSNRKTVLSVAGAAVTCVALLVVCAQHSRSAHGDAHGDAEVGMRSLQSVGELEVNGE
VQSEQVAQDGQKKGFSAYFSKLTRSRREVEKPSGADAGAPSNAPAEELRPDDLFIAVKTT
KKFHQPRLDLLLETWISRNVQQTYIFTDGEDEELKKKMGSHVINTNCSAAHSRQALSCKM
AVEYDKFIESGKKWFCHVDDDNYVNVRTLVKLLSQYPHTQDLYVGKPSLDRPIEATERLG
DNKMQPVNFWFATGGAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIESVL
GVPLTRSNLFHSHLENLQQVSRSEVQKQITLSYGMFENKRNIINMKGVFPVEEDPSRFKS
VHCLLYPDTPWCPPQVAY
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaagttccaacaggaaaaccgtgctctctgtggccggagcggccgtcacctgc
gtggcgctgctggtggtgtgcgctcagcacagccggagcgcgcatggtgacgcgcacggt
gacgcagaggtagggatgcgctccctgcaaagtgtgggcgagttggaggtgaatggagaa
gtgcagagcgaacaagtagcgcaggacggacaaaagaagggattttccgcctatttttcc
aaactgacgcggagcagaagagaggtggagaaaccctccggcgcggacgcaggagctccg
tccaacgcacccgctgaagagctgcgtcctgacgacctcttcatcgccgtgaagaccacc
aaaaagttccaccagcccaggcttgatctgcttctggaaacttggatttcaagaaacgtg
caacagacttacatcttcacagatggcgaggatgaggagttgaaaaagaaaatgggaagc
cacgtcatcaacaccaactgttctgccgctcacagccgccaggctctgtcttgcaagatg
gccgtggaatacgacaagtttatcgagtctggcaaaaagtggttctgtcacgtggatgat
gacaactatgtgaatgtcaggactcttgtcaagctactctctcaataccctcacactcag
gacctgtacgtcggcaaacccagcctggacaggcccattgaggctacagagaggctcggg
gacaacaagatgcaacctgttaatttctggtttgccaccggaggagctgggttctgcgtc
agccgtggtctggctctgaaaatgagcccatgggcaagcggaggtcatttcatgaacaca
gccgagaagatccgtctccctgacgactgcaccatcggttacatcatcgagtcggttctc
ggggttccgctgacacgcagcaacctgtttcactcgcatctagagaacctgcaacaggtt
tcccgatctgaagtccaaaaacagattacacttagttacggtatgtttgagaacaagaga
aacatcatcaacatgaaaggagttttcccggttgaggaggacccatccaggtttaaatct
gtgcactgcctgctctatccggatactccgtggtgtcctccgcaggttgcctattaa
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